Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101964036
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Entry
101964036 CDS
T10664
Symbol
Arid5b
Name
(RefSeq) AT-rich interactive domain-containing protein 5B isoform X1
KO
K25857
AT-rich interactive domain-containing protein 5
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
iti03000
]
101964036 (Arid5b)
Transcription factors [BR:
iti03000
]
Eukaryotic type
Helix-turn-helix
ARID
101964036 (Arid5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
Motif
Other DBs
NCBI-GeneID:
101964036
NCBI-ProteinID:
XP_005334367
UniProt:
I3MSM1
LinkDB
All DBs
Position
Unknown
AA seq
1195 aa
AA seq
DB search
MEPNSLQWVGSPCGLHGPYIFYKAFQFHLEGKPRILSLGDFFFVRCTPKDPICIAELQLL
WEERTSRQLLSSSKLYFLPEDTPQGRNSDHGEDEVIAVSEKVIVKLEDLVKWVHSDFSKW
RCGLRAGPVKAEALGRNGQREALLKYRQSTLNSGLNFKDVLKEKADLGEDEEETNVIVLS
YPQYCRYRSMLKRIQDKPSSILTDQFALALGGIAVVSRNPQILYCRDTFDHPTLIENESI
CDEFAPNLKGRPRKKKPCPQRRDSFSGAKDSNNNSDGKAVAKVKCEARSALTKPKNNHNN
CKKVSNEEKPKLAIGEECRADEQAFLVALYKYMKERKTPIERIPYLGFKQINLWTMFQAA
QKLGGYETITARRQWKHIYDELGGNPGSTSAATCTRRHYERLILPYERFIKGEEDKPLPP
IKPRKQENSAQENENKTKVSGAKRIKHEIPKSKKEKENAPKPQDAAEVSSEQEKEQETLN
QKSITEPLPAADLKKKAEGYQDFTARSLASRTDPENDNETDQGSNSEKEAEEVGEKGPAA
PLPSTPVAPERDPVPIPGAGKQSLTSPNVLVDSKPESKPCCFTESPDSDLQEASFASFPS
TQPPLANQNDIEDDKLPAMADYIANCTVKVDQLGSDDIHNALKQTPKVLVVQSFDMFKDK
DLTGPMNENHGLNYTPLLYSRGNPGIMSPLAKKKLLSQVSGASLSSSYPYGSPPPLISKK
KLIARDDLCSGLSQAHHSQSADHMAVSRPSVIQHVQSFKSKPSEDRKSINDIFKHDKLSR
SDAHRCSFSKHHLNSLADSYVLKQEIQEGKDKLLEKRALPHSHMPSFLADFYSSPHLHSL
YRHTEHHLHNEQTPKYLSRDMYRESENSSFPSHKHQEKLHVNYLASLHLQDKKLASEKLA
AAEAPTDDQPTDLSLPKNPHKPTGKVLGLAHSATGPQENKGISQFQVVSSQSRDCHPKAC
RVSPMTMSAPKKYPESLSRSGKPHHVRLENFRKMEGMVHPILHRKMSPQNIGAARPIKRS
LEDLDLVIAGKKARAVSPLDPSKEVSGKEKASEQESEGGKAAYGGGGHSGGGSEGHKLPL
SSPIFPGLYSGSLCNSGLNSRLPAGYSHSLQYLKNQTVLSPLMQPLAFHSLVMQRGIFTS
PTNSQQLYRHLAAATPVGSSYGDLLHNSIYPLAAINPQAAFPSSQLSSVHPSTKL
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atggagcccaactcactccagtgggtcggctcaccgtgtggtttgcacggaccttacatt
ttctacaaggcttttcaattccaccttgaaggcaaaccaagaattttgtcccttggcgac
tttttctttgtaagatgtacgccaaaggatccgatttgcatagcggagctccagctgttg
tgggaagaaaggaccagccggcaacttttatccagctctaaactttatttcctccccgaa
gacacaccccagggcagaaatagcgaccatggcgaggatgaagtcattgctgtttccgaa
aaggtgattgtgaagcttgaagacctggtcaagtgggtccattctgatttctccaagtgg
agatgtggcctacgagctgggccagtgaaagcagaggcattgggaagaaatggacagcga
gaggctctgctgaagtacaggcagtccaccctcaacagcggactcaatttcaaagatgtt
ctcaaggaaaaggccgaccttggggaggacgaggaagaaaccaatgtgatcgttctcagc
taccctcagtactgccgctaccgctccatgctgaaacgcattcaggataagccatcttcc
attctaactgaccagttcgcgctagccctgggtggcatcgcagtggtcagcaggaaccct
cagatcctgtactgccgggacacctttgaccaccccactctcatagaaaatgagagtata
tgcgatgaatttgcgccaaatcttaaaggcagaccacgcaaaaagaaaccgtgcccacaa
agaagagactcattcagtggagctaaggattccaacaataattccgatggtaaagctgtt
gccaaggtgaaatgtgaggccagatcagccttgaccaagccgaagaataaccataataat
tgtaaaaaagtctccaatgaagaaaaaccaaagctggccattggtgaagagtgcagggca
gatgaacaggccttcttggtggcactttataagtacatgaaagaaaggaaaacaccaata
gaacgaataccctatttaggttttaaacagattaacctttggactatgtttcaagctgct
caaaaactgggaggatatgaaacaataacagcccgccgtcagtggaaacatatttatgat
gaactaggtggtaatcctgggagcaccagcgccgccacttgcacccgcagacattatgaa
agattaatcctgccatatgaaaggtttattaaaggagaggaagataagcccttgcctcca
atcaaacctcgaaaacaggagaacagtgcacaggaaaatgaaaataaaacaaaagtatca
ggagccaagcgcatcaaacatgaaatacctaagagcaaaaaagaaaaagagaatgcccca
aagccccaggatgcagcggaggtttcatcagagcaagagaaagaacaagagactttaaac
cagaaaagcatcacagagcctctcccggcagctgacttgaagaaaaaagcggaagggtac
caggattttacagcaaggtccctagcatccagaacagacccagaaaacgacaatgaaacg
gaccaaggttccaacagtgagaaagaggcggaggaggtgggagagaagggaccggcagct
ccgctcccgagcacgcccgtggctcctgaaagggatccggtcccaattcctggggctggc
aagcagtccctcacctctcctaatgtcctggtggactccaagccagaatccaaaccctgc
tgttttacagagagccctgacagtgacctccaagaagcatcttttgccagcttcccctct
actcagccaccactggcaaaccagaatgacatcgaggatgacaaactacccgccatggct
gattacatcgccaactgcactgtgaaggtggaccagctgggcagtgacgacatccacaat
gcactaaagcagacccccaaggtccttgtggtccagtcatttgacatgttcaaggacaaa
gacctgactggacccatgaatgagaaccatggacttaattacacacccctgctctactct
cggggcaacccgggcatcatgtccccgctggccaagaaaaagcttttgtcccaagtgagt
ggggccagcctctccagcagctacccctatggctccccaccccctttgatcagcaaaaag
aaattgatagccagggatgatttgtgttctggtttgtcccaggcccaccacagtcagagc
gccgaccacatggcggtcagccggccgtcggtgattcagcacgtccagagtttcaaaagc
aagccctcggaggacagaaagagcatcaatgacatttttaagcatgacaagctgagtcga
tcagatgcccaccgctgcagcttctccaagcatcacctgaactccttggctgactcctat
gtcctgaagcaagaaattcaggagggcaaggataaactcttagagaagagggcactcccc
cattcccacatgcccagcttcctggcagatttctactcatccccacatctccatagcctc
tatcgacacaccgaacaccatcttcataatgaacagacacccaagtatctttctagagac
atgtacagggaatcggaaaatagttctttcccttcccacaaacatcaagaaaagctccat
gtaaattatctcgcatctttgcatctgcaagacaaaaagttggcctcagaaaagctggcc
gccgcagaagcccctacggatgatcaaccaacggatctgagcctccccaagaacccacat
aaaccaaccggcaaggtcctgggcctggcccactcagccacagggccgcaggagaacaaa
ggaatctcccagttccaggtcgtcagcagccagagtcgagactgccaccccaaagcttgt
cgggtatcgcccatgaccatgtcggcccctaaaaagtacccagagtcactctcgagatcg
gggaaacctcaccacgtgagactggagaatttcagaaagatggaaggcatggtccatcct
atcctgcaccggaaaatgagcccccagaacattggtgcagcacgtcccatcaagcgcagc
ctggaggatttggaccttgtgattgctgggaaaaaggcccgggcagtgtctcccctggac
ccgtccaaggaggtctctgggaaagagaaggcctctgagcaggagagtgaaggaggcaag
gcagcctatggtggtggtgggcattccgggggtggatctgagggccacaagcttcccctc
tcctcccctatcttcccaggtttgtattcggggagcctgtgtaactcgggcctcaactct
aggctcccagctgggtattctcattctctgcagtacttgaaaaaccaaactgtgctttct
ccactcatgcagcccttggctttccactcgctggtgatgcagaggggaatttttacatca
ccgacaaattctcagcagctgtacagacacttggctgcggccacacctgtaggaagttcg
tacggggaccttttgcacaacagcatttaccctttagctgctataaatcctcaagctgcc
tttccatcttcccagctgtcgtccgtacaccccagtacaaaactgtaa
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integrated database retrieval system
