Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101964057
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Entry
101964057 CDS
T10664
Symbol
Myo5a
Name
(RefSeq) unconventional myosin-Va
KO
K10357
myosin V
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04814
Motor proteins
Brite
Messenger RNA biogenesis [BR:
iti03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
101964057 (Myo5a)
mRNA cycle factors
P-body specific factors
101964057 (Myo5a)
Membrane trafficking [BR:
iti04131
]
Others
Actin-binding proteins
Myosins
101964057 (Myo5a)
Mitochondrial biogenesis [BR:
iti03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
101964057 (Myo5a)
Cytoskeleton proteins [BR:
iti04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
101964057 (Myo5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
101964057
NCBI-ProteinID:
XP_021580920
LinkDB
All DBs
Position
Unknown
AA seq
1933 aa
AA seq
DB search
MKAWLKTSSCQAVSRRLAGPSHVGWQLCRAGSCAAARGQQLADLDLCGSGPLRLVAGIRL
SGFARVWIPDPEEVWKSAELLKDYKPGDKVLLLHLEEGKDLEYRLDPKTKELPHLRNPDI
LVGENDLTALSYLHEPAVLHNLRVRFIDSKLIYTYCGIVLVAINPYEQLPIYGEDIINAY
SGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYFATVSGSA
SEANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLLEKS
RVVFQAEEERNYHIFYQLCASAQLPEFKMLRLGNANSFHYTKQGSSPVIEGVDDAKEMAH
TRQACTLLGISESYQMGIFRILAGILHLGNVAFTSRDSDSCTIPPKHEPLSIFCDLMGVD
YEEMCHWLCHRKLATATETYIKPISKLQATNARDALAKHIYAKLFNWIVDHVNQALHSAV
KQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTLI
DFYDNQPCINLIESKLGILDLLDEECKMPKGTDDTWAQKLYNTHLNKCTLFEKPRLSNKA
FIIQHFADKVEYQCEGFLEKNKDTVFEEQIKVLKSSKFKMLPELFQDDEKAISPTSATSS
GRTPLTRIPAKATKGRPGQTAKEHKKTVGHQFRNSLHLLMETLNATTPHYVRCIKPNDFK
FPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVLGDRKQTC
KNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKLRADKLRAACIRIQKTIRGWLLRKKYL
RMRKAAITVQRYVRGYQARCYAKFLRRTKAAVIIQKYWRMYVVHKKYKIKRAATIVLQSY
LRGYLARNRYRKILREHKAVIIQKWVRGWLARTHYKKSMHAIIYLQCCFRRMMAKRELKK
LKIEARSVERYKKLHIGMENKIMQLQRKVDEQNKDYKCLLEKLTNLEGVYNSETEKLRSD
LERLQLSEEEAKVATGRVLSLQEEIAKLRKDLEQTQSEKKTIEERADRYKQETEQLVSNL
KEENTLLKQEKETLNHLIVEQAKEMTETMEKKLVEETKQLELELNDERLRYQNLLNEFSR
LEERYDDLKEEMTLMVNVPKPGHKRTDSTHSSNESEYTFSSEIADTEDIPSRTEEPSEKK
VPLDMSLFLKLQKRVTELEQEKQVMQDELDRKEEQMLRSKAKEEERPQIRGAELEYESLK
RQELESENKKLKNELNELRKALSEKSAPEVTAPGAPAYRVLMEQLTSVSEELDVRKEEVL
ILRSQLVSQKEAIQPKDDKNTMTDSTILLEDVQKMKDKGEIAQAYIGLKETNRSSAMDYH
ELNEDGELWLVYEGLKQANRLLESQLQSQKRSHENEAEALRGEIQSLKEENNRQQQLLAQ
NLQLPPEARIEASLQHEITRLTNENLYFEELYADDPKKYQSYRISLYKRMIDLMEQLEKQ
DKTVRKLKKQLKVFAKKIGELEVGQMENISPGQIIDEPIRPVNIPRKEKDFQGMLEYKKE
DEQKLVKNLILELKPRGVAVNLIPGLPAYILFMCVRHADYLNDDQKVRSLLTSTINSIKK
VLKKRGDDFETVSFWLSNTCRFLHCLKQYSGEEGFMKHNTSRQNEHCLTNFDLAEYRQVL
SDLAIQIYQQLVRVLENILQPMIVSGMLEHETIQGVSGVKPTGLRKRTSSIADEGTYTLD
SILRQLNSFHSVMCQHGMDPELIKQVVKQMFYIVGAITLNNLLLRKDMCSWSKGMQIRYN
VSQLEEWLRDKNLMNSGAKETLEPLIQAAQLLQVKKKTDDDAEAICSMCNALTTAQIVKV
LNLYTPVNEFEERVSVSFIRTIQMRLRDRKDSPQLLMDAKHIFPVTFPFNPSSLALETIQ
IPASLGLGFISRV
NT seq
5802 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcttggctaaagacctcttcctgccaagctgtgtctcggaggctagcgggaccg
agtcacgttggctggcagctgtgccgggcgggcagctgcgccgcggctcgcggacaacag
ctggcggatctggacctctgtggatctggacctctgcgtctcgtggcgggcattcgcttg
tctggatttgctagggtttggatacctgatcctgaggaagtttggaagtcagcagagctg
ctcaaagattataagcctggagataaagtcctcctgcttcaccttgaggaaggaaaggat
ttggaataccgtctagatccaaagaccaaggagctgcctcatctacgaaaccctgatata
cttgttggagaaaatgacctcactgccctcagctatcttcatgagcctgctgtgctccat
aatctcagagtccgctttattgattccaaactcatttatacatattgtggtatagtccta
gtagctataaatccttatgaacaactgcctatttatggagaagatattattaatgcttac
agtggtcagaacatgggtgatatggatccacatatctttgcagtagctgaagaagcttat
aagcaaatggccagagatgagcgaaatcagtccatcattgtaagtggagagtctggggca
ggaaaaacagtctcagctaagtatgctatgcgatactttgcaactgtaagtggttctgcc
agtgaggccaacgttgaagagaaggtcttagcctccaaccccatcatggagtctattgga
aatgctaaaacaaccaggaatgataatagcagtcgctttgggaagtatatagagattggt
tttgataagagatatagaatcattggtgccaatatgagaacataccttttagagaaatcc
agagtggtgttccaggcagaagaggagagaaactatcatatcttctatcagctttgtgcc
tcagcacaattacctgaatttaaaatgctgcgattaggaaatgcaaatagctttcattac
acgaaacagggaagtagcccagtgattgaaggagtggatgatgcaaaggagatggcacac
accaggcaggcctgcactctactaggaattagtgaatcttatcaaatgggaatttttcga
atacttgctggcatccttcacttaggcaatgttgcatttacttctcgagattcagacagc
tgcacaatacctcccaagcatgaacctctcagcatcttctgtgatctcatgggtgtggat
tatgaggagatgtgtcattggctttgccatcggaagctggctactgccacagagacatac
atcaagcccatctccaagctgcaggccacaaatgcccgtgatgctttagccaagcacatc
tatgccaagctctttaactggattgtagatcatgtcaatcaggctctgcattctgctgtt
aagcaacactcttttattggcgtgctggatatttatggattcgaaacatttgagataaat
agttttgagcagttttgtataaattatgcaaatgaaaaactacagcagcaattcaacatg
cacgttttcaaattggaacaagaggaatacatgaaagaacaaattccatggacactcata
gatttttatgataatcagccttgtattaatcttatagaatctaaactgggcattctagat
ttgctggatgaggaatgcaagatgcctaaaggtacagatgacacttgggcccaaaaattg
tacaacacacatttgaacaaatgtacactctttgaaaagcctcgcctgtcaaacaaagct
ttcatcatccaacattttgctgacaaagtggaataccagtgtgaaggctttcttgaaaag
aataaagacactgtttttgaggaacaaattaaagttcttaagtcaagcaagtttaagatg
ctaccagaactatttcaagatgatgaaaaggccattagtccaacctcagccacctcttca
gggcgtacacccctcacccgcattcctgcaaaggccactaagggcagaccaggccagaca
gccaaagagcacaagaaaacagtggggcatcagttccgaaattcccttcacttgcttatg
gagaccctcaatgccactactcctcactatgtgcgctgtattaagcctaatgacttcaag
tttccattcacgtttgatgagaagagggcagtgcagcaactgagagcatgtggtgtcctg
gaaaccattcgaatcagtgcagcaggtttcccctcacggtggacttaccaagaatttttc
agtcgctaccgagtcttaatgaagcaaaaagatgtgctaggtgacagaaagcaaacatgc
aagaatgtgttagagaaactgatactggacaaggacaaataccagtttggtaaaacaaag
atctttttccgtgctggtcaagtggcctatctagaaaaattgagggcagacaaactgagg
gctgcctgcattcggatccagaagaccatccgaggttggctgctgaggaagaagtaccta
cgcatgcgtaaagcagccatcactgtgcagagatatgtgcggggctaccaggctcgatgc
tatgctaaatttctgcgtagaaccaaggcagcagtcatcattcagaaatactggcggatg
tatgtggtccacaagaagtacaagattaaacgagctgccactattgttcttcagtcttat
ttgcgaggctatttggccagaaataggtatcgaaagatactccgtgaacacaaagcagtc
atcattcagaagtgggtccgtggctggctggctcgaacacattacaagaagagcatgcat
gccataatctatcttcagtgttgcttcaggaggatgatggctaagcgtgagcttaagaag
ctcaaaattgaggctcgctctgtggaacgatataagaagctccacattggcatggagaac
aagattatgcagctgcagcgcaaagttgatgagcagaataaagactacaaatgcctcctg
gaaaaactgaccaatctggaaggagtatacaactctgagactgagaaattacggagtgac
ttagaacgtcttcagctaagtgaggaggaagctaaggttgccactggacgagttcttagt
ctgcaggaagaaattgccaagctccggaaagacctggaacaaactcagtcagagaaaaaa
accattgaagaacgagcagatagatataaacaagaaactgagcagctggtatcaaatctg
aaagaagaaaatactttgctgaagcaggaaaaagagacccttaatcaccttattgtggag
caggctaaggagatgacagaaactatggagaagaagctagtagaagaaacaaaacaactg
gaacttgagcttaatgatgaaaggctgagataccagaaccttctgaatgagttcagtcgc
ctagaagaaagatatgatgacctcaaggaagagatgaccctcatggtgaatgtgcctaag
cctggacacaagagaacagactccacccatagcagcaatgagtccgaatatacctttagc
tctgaaattgcagatactgaagatattccatcaagaacagaggagccaagcgaaaagaag
gtacctctggacatgtccttgttcctcaagctccagaagcgggtcactgagctggagcag
gaaaagcaggtgatgcaggatgagctggaccgcaaggaagagcagatgctacgcagcaag
gcaaaggaagaagaaagaccacaaattagaggtgcggaactagaatatgagtccctcaag
cgtcaagaactagagtcagaaaacaagaaactgaaaaatgagctaaatgagttacgaaag
gctctcagtgagaaaagtgccccagaggtgactgctccaggggcacctgcctaccgggtc
cttatggagcagctgacctctgtgagtgaggagcttgatgtccgcaaggaagaagtcctt
atcttaaggtctcagctggtgagccagaaagaggccatccaacccaaggatgacaagaat
acaatgacagattccacaatacttttggaagatgtacagaaaatgaaagataaaggtgaa
atagcacaagcatacattggtttgaaagaaacaaatagatcttctgctatggattaccat
gaattgaatgaggatggagagctgtggctggtttatgaagggttaaaacaagccaacagg
ctcctggaatcccagctgcagtcacagaagaggagccatgagaatgaggctgaggccctc
cgaggggagatccagagcctgaaggaagagaacaaccggcaacagcagttgctggctcag
aacctacagctacccccagaggcccgcattgaggccagcctgcagcatgagatcacccgg
ttgaccaatgaaaacttgtattttgaggaattatatgcagatgaccctaagaagtatcaa
tcatatcggatttcactttacaaacggatgattgatttgatggaacaacttgaaaaacag
gataagactgtccggaaactgaaaaaacaactgaaagtttttgccaaaaaaattggtgaa
ctagaagtgggccagatggagaatatatctccaggacagatcattgatgagcctatccgt
ccagtcaacattcccaggaaagaaaaagatttccaaggaatgctggaatacaagaaggaa
gatgagcaaaagcttgttaagaacctgattctagaactaaaaccacggggtgtagcagtc
aatttgattccagggctaccagcatatattctgtttatgtgcgttcgacatgctgattac
ctgaatgatgatcagaaagtaaggtcattactaacgtcaacaattaacagcatcaaaaaa
gtattgaagaaaagaggtgatgattttgaaactgtctccttctggctctctaacacatgc
cgatttttgcactgtttgaagcagtacagtggagaagagggcttcatgaagcataatacc
tctcgccaaaatgaacactgcctcaccaattttgacctggctgagtatcgacaggtgctg
agtgacttggccattcagatttaccaacagcttgtacgggtattagagaacatccttcaa
ccaatgattgtctcaggtatgctggagcatgaaacaattcagggtgtgtccggggtgaag
cccacggggctaagaaagcgaacctccagtattgcggatgaaggcacctacacactggac
tccatcctccgacagctcaactcattccactcagtcatgtgtcagcacggcatggaccca
gaactgatcaagcaggtggtcaagcagatgttttacattgtgggggccatcaccctgaac
aacctcctcctgcgtaaggacatgtgctcctggagtaaaggcatgcagatcaggtacaat
gtcagtcaactagaagaatggctacgtgacaagaatctgatgaacagtggggcaaaagaa
accctggaaccacttattcaagctgctcagcttttgcaagtaaaaaagaaaacagatgat
gatgcagaagccatttgttccatgtgcaatgctttaactactgcccagattgtcaaagtg
ttgaatttgtatactccagttaatgagttcgaagaaagagtctccgtctcatttattcgt
actatacagatgcgtttacgagataggaaagactcgcctcagctgctcatggatgctaaa
cacatctttcctgtcacctttccttttaacccatcctccctcgcactagaaaccatccag
attccagctagcctgggcctgggattcatttcacgggtctga
DBGET
integrated database retrieval system
