KEGG   Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101964078
Entry
101964078         CDS       T10664                                 
Name
(RefSeq) LOW QUALITY PROTEIN: proteasome subunit alpha type-6-like
  KO
K02730  20S proteasome subunit alpha 1 [EC:3.4.25.1]
Organism
iti  Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03050  Proteasome
iti05010  Alzheimer disease
iti05012  Parkinson disease
iti05014  Amyotrophic lateral sclerosis
iti05016  Huntington disease
iti05017  Spinocerebellar ataxia
iti05020  Prion disease
iti05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:iti00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    101964078
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    101964078
   05012 Parkinson disease
    101964078
   05014 Amyotrophic lateral sclerosis
    101964078
   05016 Huntington disease
    101964078
   05017 Spinocerebellar ataxia
    101964078
   05020 Prion disease
    101964078
   05022 Pathways of neurodegeneration - multiple diseases
    101964078
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:iti01002]
    101964078
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:iti03051]
    101964078
Enzymes [BR:iti01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.25  Threonine endopeptidases
    3.4.25.1  proteasome endopeptidase complex
     101964078
Peptidases and inhibitors [BR:iti01002]
 Threonine peptidases
  Family T1: proteasome family
   101964078
Proteasome [BR:iti03051]
 Eukaryotic proteasome
  Core particles (20S proteasome)
   alpha type subunits
    101964078
SSDB
Motif
Pfam: Proteasome Proteasome_A_N AMIN-like Ribophorin_II
Other DBs
NCBI-GeneID: 101964078
NCBI-ProteinID: XP_040140778
LinkDB
Position
Unknown
AA seq 244 aa
MSHGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKL
LDSSTVTHLFKITENVGCVMTEMTADSRSQVQRARYEAANWKYKYGYEIPVNMLCKRIAD
ISQVYTQNAEMRPLGCCVILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVXTESTSFLEK
KVKKFDWTFEQTVETAITCRSTVLPIDFKPSEIEVGVVTVENPKFSILTEAEIDAHLVAL
AERD
NT seq 735 nt   +upstreamnt  +downstreamnt
atgtcccatggttccagcgctggttttgaccgccacattaccattttttcgcccgaaggc
cggctttaccaagtagaatatgcttttaaggctataaaccagggtggtctgacatcagta
gctgtcagagggaaagactgtgcagtaattgtcacacagaagaaagtacctgacaaatta
ttggattccagcacagtgactcacttattcaagataactgaaaatgttggctgtgtgatg
actgaaatgacagctgacagcagatcccaggtacaaagggcacgctatgaagcagctaat
tggaaatacaagtatggctatgagattcctgtgaacatgctgtgtaaaagaattgctgat
atttctcaggtctacacacagaatgctgaaatgaggccacttggttgttgtgtgatttta
attggtatagatgaagaacaaggccctcaggtgtacaagtgtgatcctgcaggttactac
tgtgggtttaaagccactgcagcaggagttnaaactgagtcaaccagcttccttgaaaaa
aaagtgaagaaatttgactggacatttgaacagacagtagaaactgcaatcacatgccgg
tctactgttctaccaattgatttcaaaccttcagaaatagaagttggtgtagttacagtt
gaaaatcctaaattcagtattcttacagaagcagagattgatgctcaccttgttgcacta
gcagagagagactag

DBGET integrated database retrieval system