Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101964237
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Entry
101964237 CDS
T10664
Symbol
Srebf1
Name
(RefSeq) sterol regulatory element-binding protein 1 isoform X3
KO
K07197
sterol regulatory element-binding transcription factor 1
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04152
AMPK signaling pathway
iti04910
Insulin signaling pathway
iti04931
Insulin resistance
iti04932
Non-alcoholic fatty liver disease
iti04936
Alcoholic liver disease
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09132 Signal transduction
04152 AMPK signaling pathway
101964237 (Srebf1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
101964237 (Srebf1)
09160 Human Diseases
09167 Endocrine and metabolic disease
04936 Alcoholic liver disease
101964237 (Srebf1)
04932 Non-alcoholic fatty liver disease
101964237 (Srebf1)
04931 Insulin resistance
101964237 (Srebf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
iti03000
]
101964237 (Srebf1)
04131 Membrane trafficking [BR:
iti04131
]
101964237 (Srebf1)
Transcription factors [BR:
iti03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
101964237 (Srebf1)
Membrane trafficking [BR:
iti04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
101964237 (Srebf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
101964237 (Srebf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
Motif
Other DBs
NCBI-GeneID:
101964237
NCBI-ProteinID:
XP_005339510
UniProt:
I3MNU7
LinkDB
All DBs
Position
Unknown
AA seq
1121 aa
AA seq
DB search
MDCTFEDMLQLINNQDSDFPGLFDPPYAGGGAGDTEPASPSASSPGSLSPSPASLSSPLE
AFLGDPKAASPPLSPPQSAPTPLNMYPSVSPFSPGPGIKEEPVPLTILQPPTPQPLSGTL
LPQSFASSAPPQFNSAPVLGYSNLPGSFSAGTPPGSTQQPLPGLPLASPPGVPPVSLHSQ
VQSAAPQQLLTATAAPGTTTVTSQIQQVPVLLQPHFIKADSLLLTTMKTDVGATVKAAGI
SSLAPGTAVQTAPLQTLVSGGTILATVPLVVDTDKLPINRLAAGSKAAGSAQSRGEKRTA
HNAIEKRYRSSINDKIVELKDLVVGPEAKLNKSAVLRKAIDYIRFLQHSNQKLKQENLSL
RTAAHKSKSLKDLVSTCSSKGNTDVPMEGVKTELVDTLTPPPSDAGSPSQSSPLSLGSRG
SGSGGSSSDSEPDSPVFEDSQVKPEQLSSPHSLGMLDRSRLALCTLVFLCLSCNPLASLL
GGWTLPGPSDPVGIHHSSGRSMLGTEGRDGPDWAQWLLPPVVWLVNGLVVLAFLAFLFVC
GEPVTRPHSAPAVNFWRHRKQADLDLARGDFAQAAQQLWLALQALGRPLPTSHLDLACSL
LWNLIRHLLQRLWVGRWLAGHAGGLRRDCTLRADARTSARDAALVYHKLHQLHTMGKYTG
GHLAATNLALSALNLAECAGDAVSMATLAEIYVAAALRVKTSLPRALHFLTRFFLSSARQ
ACLAHSGSVPLAMQWLCHPVGHRFFVDGDWAVRSAPRESLYSLAGNPVDPLAQVTQLFRE
HLLERALNSVAQPSPNPSPGSADGDREFSDALGYLQLLTSCSDAAGAPACSFSISSSMAA
TTGTDPVAKWWGSLTAVVIHWLRRDEEAAERLYPLVEHLPRALQETEKPLPKAALHSFKA
ARAVLGRGKAESGPASLAICEKASGYLRDSLATTPTGSSIDKAMQLLLCDLLLVVRTSLW
RQQQPPTSAQVAQGASSGPQASALELRGFQRDLSGLRCLAQSFRPAMRRVFLHEATARLM
AGASPTRTHQLLDRSLRRRAGPGGKGAAGELEPRPTRREHAEALLLASCYLPPGFLSGPG
QRVGMLTEAARTLEKLGDHRLLHDCQQMLMRLGGGTTVTSS
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atggattgcacgttcgaagacatgctccagctcatcaacaaccaagacagcgacttccct
ggcctgtttgatccaccctatgctgggggtggggcaggggacacagagcctgccagcccc
agtgccagttccccaggcagcttgtctccgtctcctgcctcactgagctcccctttggaa
gccttcctgggggaccctaaggcggcatccccacctttgtcccctccccagtctgcaccc
acccccttgaacatgtacccatctgtgtcccccttctcccctggtcctggtatcaaagaa
gagccagtgccactaaccatcctgcagccccctaccccacaacccctgtcggggactctc
ctgccccagagttttgcatcctcagcccccccacagttcaactcagcccctgtgttgggt
tactccaaccttcctggaagcttctcagcagggacccctcctgggagcacccagcagccg
ctgcctggcctgccactggcttccccgccaggggtcccacctgtctccttgcatagccag
gtccagagtgcggccccccagcagctgctgacagccacagcggcccctggaacgaccact
gtaacttcacagatccagcaggtcccggtcctgctgcagccccacttcatcaaggcagac
tccctgctcctgaccaccatgaagaccgatgtgggggccactgtgaaggctgcgggtatc
agctccctggcccccggcacagctgtacagacagcgcccttgcagaccctggtgagtggc
ggaaccatcctggccacagtcccactggttgtggacactgacaagctgcccatcaaccgg
ttggcagccggcagcaaggctgcgggctcagcccagagccgtggcgagaagcgcacagcc
cacaatgccatcgagaagcgctaccgctcttccatcaacgacaagatagtggagctcaag
gacctggtggtgggccccgaggcaaagctgaataagtctgctgtcttgcgcaaggccatc
gactacatccgcttcttacaacacagcaaccagaaactcaagcaggagaacctaagtctg
cgaactgctgcccacaagagcaaatcactaaaggatctggtgtccacttgcagcagtaaa
ggaaacacagatgtgcccatggagggtgtgaagactgagctggtggacacactgacccca
ccaccttcagatgccggctcaccctcccagagcagccccttgtcccttggcagccggggt
agtggcagtggtggcagcagcagtgactcggagcctgacagcccagtctttgaggacagc
caggtgaagccagaacagctgtcatctccccacagcctgggcatgctggaccgctcccgc
ctggccctgtgcacacttgtcttcctttgtctgtcctgtaaccccctggcctccctgctg
ggtggctggacgcttcctggcccctcagatcctgtgggtatccaccacagttctgggcgc
agcatgctgggcactgagggcagagatggccctgactgggcccagtggctgctgccccct
gtggtctggctggtcaatgggctagtggtgctggctttcttggcatttctctttgtctgt
ggggagccggtgacacggccccactccgcccctgctgtgaacttctggagacatcgcaag
caggctgacctggacctggcccggggggacttcgcccaggctgctcagcagctatggctg
gccttgcaggcgctgggcaggcccctgcccacctcccacctggacctggcctgcagcctg
ctctggaacctcattcgccacctgctgcagcgactctgggtgggccgctggctggccggc
catgctgggggcctgagaagggactgtaccctgagggcagacgcacgcaccagcgcccga
gatgcagccctcgtctaccataagctgcaccagctgcacaccatggggaagtacacgggt
gggcacctggctgccaccaacctggcactgagtgctctgaacctggcagagtgtgcgggg
gatgccgtgtccatggcaacgctggcggagatctatgtggcagctgccctgagggtcaag
accagtctgccaagggccctgcactttctgacacgcttcttcctgagtagcgcccgccag
gcctgcctggcacacagtggctcagtgcctcttgccatgcagtggctctgccaccccgtg
ggccaccgtttcttcgtggatggggactgggccgtgcgcagtgccccgcgggaaagcctg
tacagcttggccgggaacccagtggaccccctggcccaggtgacacagctgttccgtgaa
catctcctggagcgtgcactgaactctgtggcccagcccagccccaaccccagccccggg
tcagctgatggggacagggaattctcagatgcccttggatacctgcagctgctgaccagt
tgttctgatgctgctggggctcctgcatgcagcttctccatcagctctagcatggccgcc
accaccggcacagaccctgtggccaagtggtggggctcactgacggcggtggtgattcac
tggctgcggcgggatgaggaggcagctgagcggctctaccccttggtggagcacctgccc
cgtgccctgcaggagacggagaaacccctgcccaaggcggccctgcactccttcaaggct
gcccgggctgtgttgggtcgtggaaaggcagagtctggcccagccagcctggccatctgt
gagaaagccagcgggtacctgagggacagcctggccaccacaccaactggcagctccatt
gacaaggccatgcagctgctcctgtgtgacctgctcctcgtggtccgcactagcctgtgg
aggcagcagcagcccccaacgtcagcacaggtggctcagggtgccagcagcggcccccag
gcctctgccctcgagctacgtggcttccaacgggacctgagcggcctgaggtgtctggca
cagagcttccgtcctgccatgaggagggtgttcttacacgaggccacagcccggctgatg
gcaggggccagccctacccggacacaccaactcttggaccgcagtctgaggcggcgggca
ggtcctggtggcaaaggcgcggcgggggagctggagccgcggcccacgcggcgggagcac
gcagaagctctgctactggcctcctgctacctgccgcctggcttcctgtcggggccgggg
cagcgcgtgggcatgctgaccgaggcggctcgcacgcttgagaagctgggcgatcaccgg
cttctgcacgactgccagcagatgctcatgcgcctgggtggtgggactacagttacctcc
agctag
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