Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101964242
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Entry
101964242 CDS
T10664
Symbol
Usp30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
101964242 (Usp30)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
iti01002
]
101964242 (Usp30)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iti04131
]
101964242 (Usp30)
04121 Ubiquitin system [BR:
iti04121
]
101964242 (Usp30)
Enzymes [BR:
iti01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
101964242 (Usp30)
Peptidases and inhibitors [BR:
iti01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
101964242 (Usp30)
Membrane trafficking [BR:
iti04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
101964242 (Usp30)
Ubiquitin system [BR:
iti04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
101964242 (Usp30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
Motif
Other DBs
NCBI-GeneID:
101964242
NCBI-ProteinID:
XP_021575689
LinkDB
All DBs
Position
Unknown
AA seq
486 aa
AA seq
DB search
MKNWGVIGGIAAALAAGIYVIWGPITERKKRRKGLVPGLVNLGNTCFMNSLLQGLSACPA
FIRWLEEFTTQYTRDQKEPPRHQYLSLTLLHLLKALSCQEVTEEEVLDASCLLDVLRMYR
WQISSFEEQDAHELFHVITSSLEDERDRQPRVTHLFDVHSLEQQSEITPKQITCRTRGSP
HPTSSHWKAQHPFHGRLTSNMVCKHCEHQSPVRFDTFDSLSLSIPAATWGHPLTLDHCLH
HFISSESVRDVVCDNCTKIEAKGTLNGEKVEHQRTTFVKQLKLGKLPQCLCIHLQRLSWS
SHGTPLKRHEHVQFNEFLMMDIYKYRLLGHRPSQHHPKLKESPGPALELQDGPAAPKPVL
NQPGAPKTQIFMNGACSPSLLPTLPPPLPFPLPVVPDYSSSTYLFRLMAVVVHHGDMHSG
HFVTYRRSPPSAKNPLSTSNQWLWISDDTVRKASLQEVLSSSAYLLFYERVLSRVQHQGQ
EYKSEE
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgaagaactggggagttataggcggaattgctgctgctcttgcagcaggaatatatgtc
atttggggtcccattacagaaagaaagaaacgtagaaaagggctcgtgcctggcctcgtc
aacttagggaacacctgcttcatgaactccctgctgcagggcctgtccgcctgcccggcc
ttcatcaggtggctggaggagtttaccacccagtacaccagggaccagaaggagccgccc
cggcaccagtacttgtccttgaccctgctgcacctcctgaaagctttgtcctgccaagaa
gttactgaggaagaggtcttggatgcaagctgcttgctggatgtcttaagaatgtatagg
tggcagatctcttcctttgaagaacaggatgctcatgaattattccacgtcattacctca
tcactggaagatgagcgggaccgccagccaagggtcacgcatctgtttgacgtgcattct
ctggagcagcagtcagaaataactcccaaacagatcacctgccgcacaagagggtctcct
caccccacgtccagtcactggaaggcgcagcacccttttcatgggagactcacgagcaac
atggtctgcaaacactgtgaacaccagagtcctgttcgatttgatacctttgatagcctt
tcactaagtattccagctgccacttggggtcatcccctgaccctggaccactgccttcac
cacttcatctcctcggaatccgtgcgcgatgttgtgtgtgacaactgtacaaagattgag
gcaaaaggaaccttgaatggggaaaaggtggagcaccagaggaccacttttgttaaacag
ttaaaactagggaagctcccgcagtgtctctgcatccacctgcagcggctgagctggtcc
agtcacggcacgcctctgaagcggcacgagcacgtgcagtttaatgagttcctgatgatg
gacatctacaagtaccggctcctgggccacaggcccagtcagcaccaccctaaactgaag
gagagcccggggcctgcgctggaactgcaggacgggccagccgcccccaaaccagttctg
aatcagccaggggcccccaaaacacagatttttatgaatggcgcctgttccccgtctttg
ttgccaaccctgccacccccattgccctttcctctcccagttgttcctgactacagctcc
tccacgtacctcttccggctgatggcagtggtcgtccaccatggagacatgcactctgga
cactttgtcacttaccgacggtccccaccttcggccaagaaccctctgtcgaccagtaac
cagtggctgtggatctccgacgacactgtccgcaaggccagcctgcaggaggtgctgtcc
tccagcgcgtacctgctgttctacgagcgggtcctctccagggtgcagcaccagggccag
gagtacaagtctgaagagtga
DBGET
integrated database retrieval system
