KEGG   Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101964309
Entry
101964309         CDS       T10664                                 
Symbol
Col17a1
Name
(RefSeq) collagen alpha-1(XVII) chain
  KO
K07603  collagen type XVII alpha
Organism
iti  Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04382  Cornified envelope formation
iti04974  Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:iti00001]
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    101964309 (Col17a1)
  09158 Development and regeneration
   04382 Cornified envelope formation
    101964309 (Col17a1)
SSDB
Motif
Pfam: Collagen DUF2868
Other DBs
NCBI-GeneID: 101964309
NCBI-ProteinID: XP_013217565
LinkDB
Position
Unknown
AA seq 1500 aa
MDVTKKNKRDGTEVTERIITETVTTRLTSLPPKGGTSNGYTKTGSLGGGSRLEKQSLTHG
SSGYINSSGSLRGNASTSSYRRAHSPASTLPNSPGSTFERKTHVTRHGTYEGSSSGNSSP
EYPRKEFASSSTRGRSQTRESEIRVRLQSASPSTRWTELDDVKRLLKGSRSASVSPTRNS
SNTLPIPKKGTVETKMVTASSQSVSGTYDTTILDANLPSHMWSSTLPAGSSMGTYHNNMT
TQSSSLLNTNAYSAGSVFGVPNNMTSCSSTLHPGLSTCSSVFGMQNNLGPSSSALSHSTA
TATTSTAYGVKKNVPQSPAVVSTGVSTTSTASTTHVQSDDLLHKDCKFLILEKDNVPAKK
EMELLIMTKDSGKVFTASPASIAATSFSEDTLKKEKQAAYAADTCLKAETNGDLKTISTK
GKGTSADLHGYDRGGGVGGGGGGGGGGLWGGAPAWCPCSSCCSWWKWLLGLLLTWLLLLG
LLFGLIALAEEVRKLKARVDELERTRTSVLYYEDKMERSNKDRLQGAAPDLGTGIDKAGL
DIPSQEALWLFVRNKLMIEQENGNLRGSPGPKGDMGSQGPKGDRGLPGTPGIPGLLGHPG
PEGPKGQKGSVGDPGMEGPMGQRGREGPMGPRGEPGPPGFGEKGDRGATGEAGPQGPPGV
PGSVGPKGSSGSPGPHGPPGSIGPQGLRGEVGLPGVKGDKGPMGPPGPKGDQGEKGPRGL
TGEPGVRGLPGAVGEPGAKGAMGPAGPDGQQGPRGEQGMTGMPGTRGLPGPAGDPGKPGL
TGPQGPQGLPGTPGPPGTKGEPGTPGKIVTSGGSSTITVPGPPGPPGAMGPPGPPGTPGP
AGPAGLPGQQGPRGEPGLAGESFISSSSSISEVLSAQGLDLRGPPGPPGPRGPPGPAIPG
PPGPRGPPGEGLPGPPGPPGSFLADSENFFSGPPGPPGPPGPKGDPGPPGPRRHQGSSSL
AFDLQGPPGPPGPQGPKGDPGVPGAPGIPGVPSQGGSSSTMYVPGPPGPPGPPGPPGSLS
SSGQEIHQYISEYMQSDSIRSYLSGVQGPPGPRGPPGPVTTITGETFDYAELASHVVKYL
QTSGYSISSSSSSISSEDILAVLQRDEVRQYLRQYLMGPRGPPGPPGAGGDGSLLSLDYA
ELSNRIISYMSSSGIGIGLPGPPGPPGLPGTSYEELLSLLRGSEYRGIIGPPGPPGPPGI
PGNAWSSISMEDLSSYLHSAGLSFTTGPPGPPGPPGPRGPPGVSGALVNYAAENSDNFRS
ELISYLTSPDVRSFIVGPPGPPGPQGPPGDSRLVSRDNSYSWGHSSSSSRGTSYSSSGVG
GTNGGSLGEGGAFGTGDGGPYGTDISRGGGYGAASEGGVYGGNGESFRAGFAGDLDYNEL
AVRVSESLQRQGLLQGMAYTVQGPPGQPGPQGPPGISKVFSAYSNVTEDLMDFFRTYGTI
PGPPGQKGEMGTPGPKGDRGPPGSRGLPGPPGPQGHKGEKGDKGDQVYVGRRKRSIAIKP
NT seq 4503 nt   +upstreamnt  +downstreamnt
atggatgtgaccaagaaaaacaaacgagatggcactgaagtcactgaaagaattatcact
gaaacagtaactacaagacttacctccttaccaccaaaagggggaaccagcaatggctac
accaaaacaggctctctgggtggagggagccggctggagaagcaaagcctgacccatggc
agcagtggctacataaactcaagtgggagcctcaggggcaatgcctctacctccagttac
aggagggcacattcgcccgcctccactctgcccaactcaccaggctccaccttcgagagg
aaaacccacgtcacccgccacgggacctacgaagggagctccagcggcaactcttctccg
gagtacccccggaaggaatttgcatcatcttcaacccgaggacggagccaaacacgagag
agtgagattcgagttcgactgcagagtgcgtccccatctaccagatggacagaactggat
gatgtaaagcgtttgctcaaggggagccgatcagcaagtgtcagtcccacccgcaactcc
tccaacactctccccatccccaagaaaggcaccgtggaaaccaaaatggtgacagcaagc
tcccagtcagtgtcagggacctacgacacaacgatcctggatgccaaccttccttcccat
atgtggtcctctactttgcctgcggggtcctccatggggacctaccacaacaacatgaca
acccagagctcatctctcctcaacaccaatgcctactcagcaggatcagtctttggagtt
ccaaataacatgacatcctgctcttccaccctgcacccaggactcagcacctgctcctca
gtgtttggcatgcagaacaatctgggccccagttcgtctgctctgtcccacagcacggcc
actgctaccacttccacagcatatggtgtgaagaaaaacgtgccccagagccctgccgtc
gtgagcaccggtgtatccaccacctctacagcctctaccacccatgtccagagcgatgac
ctcttgcacaaggactgcaagttcctgatcctggagaaagacaatgtgcctgccaagaag
gagatggagctgctgatcatgaccaaggacagcgggaaggtcttcacggcctccccggcc
agcatcgctgcaacttctttttcagaagacaccctgaaaaaagaaaagcaggctgcctac
gctgctgacacttgcctgaaagcggaaactaacggagacttgaagaccatatccacaaag
ggcaagggcacctccgcagatctccacggctatgaccgaggcggcggtgttggtggaggt
ggaggcggtggtggcgggggactgtgggggggcgcacctgcctggtgcccctgcagttcc
tgctgcagctggtggaaatggctgctgggcctgctgctcacctggctgctgctcctggga
ctactctttggcctcattgctctggcggaggaggtgaggaagctgaaagcccgcgtagat
gagctggagaggaccaggaccagcgtgctctattatgaggacaagatggaaaggagcaac
aaggaccgcctgcagggagccgcgcccgacctgggtacaggcatagacaaagcaggactg
gacatccccagccaggaggcactctggctgttcgtgaggaacaagctgatgattgagcag
gaaaatggaaacctccgaggaagccctggccctaaaggggacatgggaagtcaaggccct
aaaggagatcgaggtctcccggggactccaggtatccctgggctcttgggccacccaggt
ccagaaggaccaaagggacaaaaaggcagcgtgggagatcctggcatggaagggcccatg
ggccagagagggcgagagggccccatgggacctcgtggtgaaccagggcctccagggttt
ggagagaaaggggacagaggagctactggtgaagccggtcctcagggccctcctggtgtc
ccgggttctgtgggtccaaaaggttccagtggctctcctggaccccatggccccccaggt
tctataggtccccaagggctccgaggtgaagtgggactccctggtgtcaaaggtgacaaa
ggacctatgggaccaccaggacccaaaggtgaccagggtgagaaaggacctcgaggcctc
acaggcgagcctggagtgagaggtttgcctggagcggtgggtgagcccggagctaaagga
gcaatgggtcctgctggccccgatggacaacaaggcccaagaggtgagcaaggcatgacg
gggatgcctggaacccgtggcctaccaggacctgctggagacccaggaaagccaggtctc
acaggaccccagggacctcagggacttcctgggacccctggccctccggggactaaaggt
gaacctggcactccaggcaagatagtaacttcaggtggatcatcaacaatcactgtccca
ggcccccccggacctcctggagcaatgggacccccagggcccccaggtaccccaggtcct
gctggccccgctggtctcccaggacagcaaggtccacgaggggagccaggacttgcgggt
gaatccttcatcagttctagcagctccatctccgaagtcctctctgctcaaggtcttgat
ttacgaggtcccccaggcccacctgggccacgtgggccaccagggcctgccatccccggc
cctccaggaccccgaggacctccaggggaaggcttgccaggcccaccaggcccaccagga
tctttcctggctgactcagaaaacttcttctctggccctccaggcccacctggcccccca
ggccccaagggagacccaggtcccccaggcccccgaagacatcaaggttccagttccctg
gcatttgacctacagggaccaccaggcccacctggcccacagggacccaaaggtgatccc
ggtgtcccaggggctcctggcatccctggagttccttctcaagggggatcatcaagcacc
atgtatgtgccaggcccacctggaccaccagggccccctgggcctccaggctccctgagc
agctccggccaggagattcatcagtacatctctgagtacatgcagagtgacagcattagg
tcttatctatctggagtacagggtcccccaggcccacgaggtcctccggggcctgtcacc
actattacaggagagacttttgactacgcagagctggcaagccatgttgtgaagtacttg
cagacttcagggtacagtatcagctcttcctcgtcctccatctcctccgaagacatcctg
gctgtgctgcagcgtgatgaagtgcgtcaatacctgcgtcagtacctgatgggccctcgg
ggtcccccagggccaccaggagctggtggagatgggtccctcctgtctttggactatgca
gagctgagcaatcgcatcatcagctacatgtcgagttctgggatcggcattgggcttccg
ggccccccaggtccccctggcctcccaggaacttcctatgaggagctcctctccttgctc
cgagggtctgaatatagaggcatcattggacccccaggtcctccagggccaccagggatc
ccaggcaatgcatggtccagcatcagcatggaggacctctcttcttacttgcacagtgca
ggcttgtcattcaccacaggccctccaggccctcctgggcccccaggtcctcgagggccc
ccaggtgtctcaggagctctggtaaactatgcagctgaaaacagtgacaacttccggagt
gagctgattagctacctcacaagtcctgatgtgcgcagcttcatcgttgggcccccaggc
cctcctgggccacagggaccaccaggagacagccgtttggtgtcacgggataactcctac
agttggggtcacagctcttcctccagtcggggcacgtcctacagttcttcaggtgttgga
ggaaccaatggaggctccctgggtgaaggtggagcctttggcacaggagatgggggtccc
tatggcactgacatcagcagaggtgggggctatggggcagcatcagaaggcggcgtgtat
ggtggcaatggcgaatcgttccgagctggcttcgctggagacctggattacaatgagctg
gctgtgagggtgtcagagagcttgcaacgtcagggcctgctacagggaatggcctacact
gtccagggcccaccagggcagcctgggccccagggtccccctggcatcagcaaggtcttc
tctgcctacagcaatgtaactgaagacctcatggacttcttccgaacttatggaaccatt
ccaggaccccctgggcagaagggagaaatgggcaccccaggacccaaaggtgacagaggc
cctcctggatcacgaggccttcctgggccacctggccctcaagggcacaagggagaaaaa
ggagacaaaggtgaccaagtctacgttgggcggaggaagagaagtattgccatcaaacca
tga

DBGET integrated database retrieval system