Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101964329
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Entry
101964329 CDS
T10664
Symbol
Lama1
Name
(RefSeq) laminin subunit alpha-1
KO
K05637
laminin, alpha 1/2
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04151
PI3K-Akt signaling pathway
iti04510
Focal adhesion
iti04512
ECM-receptor interaction
iti04820
Cytoskeleton in muscle cells
iti05145
Toxoplasmosis
iti05146
Amoebiasis
iti05165
Human papillomavirus infection
iti05200
Pathways in cancer
iti05222
Small cell lung cancer
iti05410
Hypertrophic cardiomyopathy
iti05412
Arrhythmogenic right ventricular cardiomyopathy
iti05414
Dilated cardiomyopathy
iti05416
Viral myocarditis
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
101964329 (Lama1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101964329 (Lama1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101964329 (Lama1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
101964329 (Lama1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101964329 (Lama1)
09162 Cancer: specific types
05222 Small cell lung cancer
101964329 (Lama1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
101964329 (Lama1)
09174 Infectious disease: parasitic
05146 Amoebiasis
101964329 (Lama1)
05145 Toxoplasmosis
101964329 (Lama1)
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
101964329 (Lama1)
05412 Arrhythmogenic right ventricular cardiomyopathy
101964329 (Lama1)
05414 Dilated cardiomyopathy
101964329 (Lama1)
05416 Viral myocarditis
101964329 (Lama1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
EGF_laminin
Laminin_G_2
Laminin_B
Laminin_I
Laminin_N
EGF_LMN_ATRN
Laminin_II
RB_B
Motif
Other DBs
NCBI-GeneID:
101964329
NCBI-ProteinID:
XP_040126457
LinkDB
All DBs
Position
Unknown
AA seq
3067 aa
AA seq
DB search
MRGGCARGALLASLLWVAVQCQQRGLFPAILNLASHADISANATCGEKGPEMFCKLVEHV
PGRPVRNAQCRVCDSSSSNPKERHPISHAIDGTNNWWQSPSIQNGREYHWVTITLDLRQI
FQVAYVIIKAANAPRPGNWILERSLDGTTFSPWQYYAVSDTECLTRYNITPRRGPPTYRA
DDEVICTSYYSRLIPLDHGEIHTSLINGRPSADDPSPRLLEFTSARYIRLRLQRIRTLNA
DLMTLSHREPKDLDPIVTRRYYYSIKDISVGGMCICSGHASNCPWDETTKKLQCLCEHNT
CGESCNMCCPGYHQQPWRPGTISSGNTCEQCNCHNKAKDCYYDENVANQKRSLNTAGQFR
GGGVCINCLQNTMGINCETCVDGYYRPHKVSPYEDEPCHPCDCDPVGSLSAICVKDDLHS
DLNKGKWPGQCPCKEGYAGEKCDRCQFGYKGYPNCVPCDCNLAGSVNDDPCTDPCLCKEN
VEGKNCDRCKPGFYNLKERNPQGCSECFCFGVSDVCDSLSWPIGQVNDMSGWLVTDLVSP
NKIHSQQEALGGRHQISINNTLVMQRLTSKYYWSAPEAYLGNKLTSFGGFLKYTVSYDIP
VETVDSDLMSHADIIIKGNGITLSTQAEGLSLQPYEEYFNVVRLVPENFRDFHNKKQIDR
DQLMTVLANMTHLLIRANYNSAKMALYRLDSVSLDTASPNAIDLAVATDVEHCECPPGYT
GTSCESCLSGYYRVDGILFGGICQPCECHGHASECDVHGVCFACAHNTTGDHCEQCLPGF
YGVPSHGTSGDCQPCACPLSTASNNFSPTCHLEGDEVICDQCAPGYSGAWCERCADGYYG
NPTVPGESCVLCDCNGNVNPSEPGHCDSVTGECLKCVGNTDGPHCERCADGFYGDAVTAK
NCQACDCHEKGSLSDVCHLETGLCDCKPHVIGQQCDQCLPGYYGLDTGLGCLPCNCSPAG
SMSDECTEEGQCYCIPGVTGKRCDRCSHGFYAYQDGGCTSCDCAHTQNNCDPESGKCICP
PHTWGLECEKCEEGYWGLDPEHGCQACNCSHEGSANPQCDMLSGHCQCKQEFGGKRCDQC
SLGYRDFPDCVPCDCDLRGTLVDTCDLEQGLCSCAEKTGTCSCKENVFGLQCSKCRVGTF
ALRADNPLGCSPCFCFGLSHLCSELEGYVRTRVTLDSKQPLLRVVSQSNLKGTSEGVYYQ
APDILLDATTVRQHVHGEPFYWRLPEQFQGDQLLAYGGKLKYTMAFYSSDGIGTSNYEPQ
ILIKGGRTRKQVIYMDAPAPENGVRQDQEVEMKENFWKYFNSVSEKPVTHSDFMSILSNI
EYILIKASYGQGLQQSRISNISMEVGTKATELHPEGEVASLLENCLCPPGTAGFSCQDCA
PGYYRGKLPEGSGRGPRPLLAPCVPCNCNNHSETCDPETGKCLNCHDNTAGDHCDVCAPG
YYGKVTGSARDCSPCTCPHPYPSSFSPTCVLEGDGGFRCDACALGYEGQYCERCSSGYHG
DPQIPGGSCQKCDCSPQGSVHSDCDRISGQCTCRPGATGIRCQECQPRHILVESNCVSCD
DECAGVLLNDLDDVGNAILSMNLTGIFPVPHGILSNLENTTKYLQESLLKANTQKNWAGI
QLEGVAEQTEDLQKQLTRVLTNSQQVNRETENILDQSQDLATFIKRLHQSIREILEKATT
LNQTLDEDFQLPDSALHNIQQNISSLLEIIQKRNFTHLHQNATLELKAAEDLLSQVQKHY
QKPQEELEVLKKTAKGFLSKHHSELRAAEELLRDAETKTQETNRLLLIVKANLREFRDKK
LRLQEEPNLTSKLIAKGRGLIDAASAHGDTTQNALAQLEHHRDELLLWTAKLRQHVDDLV
MQMSKRKAIDLVHRAEDHATELQRLAGVLDRGLKNVRHVTLNATSAAHVHYNLQSLTEES
EKLANDAHRTVSETSLFSESLLSNGRAALQRSARFLSESNNLNRKHQGITLKLSKLRHRA
NGFQENTDEITRQTNASLLILRAIPEGVRVKGTKTKELAMSANQSALSTLKDVVGLSQKL
FNTSTDLSRMNTTLQETNELLRDSSVTTLLAGRKVKDMETQANLLFDRLKPLKTLQENLS
RNLSEIRLLINQARRQAASIKVAVAADRDCIRAYQPQISSSNYNTLTLNVKTPEPDNLLF
YLGSSTSSDFLAVEMRRGKVAFLWDVGSGSTRLEFPDFPIDDNQWYSIHATRFGNVGSLS
VKEMSSTQKPPMKTSKSPGMANVLDVNNSTLMFVGGLGGQIKKSSAVKVTHFKGCMGEAF
LNGKSIGLWNYVEREGECDGCFSSPQNEDSSFHFDGSGYSVVEKTLRATVTQIIMLFSTF
SPNGLLLYLASNGTKDFLSIELVQGRVKVAVDLGSGPLVLMTDRRYNNGSWYKIAFQRNR
KQGLLAVIDAYDTSDKETKQGETPGPSSDLNRLEKDLIYVGGVPWSRVVRKGITSKSYMG
CIRNLEISRSTFDLLRNSYGVRKGCRLEPIQSVSFLRGGYVELPPTSLSPESELLGTFAT
QNNSGIILAALGRDAERQNRRQAHVPFFSIMLVEGHIEVHVSSGDGTSLRKALLHAPMGT
YGDGQEHSISLIRNRRIITVQLDETSPVELKLSALAESKTINISNLYIGGIPEDEEIPML
KMRKSFQGCIKNLIFNMELLDFTRAVGYEQADLDTCLLSERPKLALPGEDSEFLPEPSTL
PLPEQCAVDIAPGYVPGAYQFGLSQSSHLMLPFNQSAVRRKLLVQLTIRTFASSGLIYYM
AHQNQVDYATLQLHGGYLHFMFDLGKGRTKVTHPTLLNDGKWHTVKTEYFKRKGVMAVDG
QESPMVTMVGDGTTLDVEGMLYLGGLPSQYRARNIGNITHSIPACIGEVSVNSKQLDKDS
LVSAFAVGRCYTVAQEGTFFDGSGYAALVKEGYRVRSDLNITLEFRTSSENGVLLGISSA
KVDAIGLEIVSGKLLFHVNNGAGRITKDVFQMFQEIITNNKHLLTHLKLFLFLLCSLISF
HKIKQDVSFFLSVTANVKQNCLSSRASFRGCLRKLTLIKGQQVQSYDFNTAFDLQGVFPH
SCPGAES
NT seq
9204 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggcggctgcgcgcgaggcgcgctcctggcctcgctgctttgggtcgcagtgcag
tgccagcagagaggtttgttccctgccattcttaatctggccagccatgctgacatcagt
gccaacgcgacctgtggagagaaggggcccgagatgttttgcaaactcgtggagcacgtg
cctggccgccctgtacgcaatgcccagtgccgggtctgtgacagcagcagctcgaacccc
aaagaacgccacccaatatcccatgcgatagatggcaccaacaactggtggcaaagtccc
agcattcaaaatgggagagagtatcactgggtcacaatcactctggacctaagacagatt
tttcaagttgcctatgtcatcattaaagccgccaatgcccccagacctggaaactggatt
ttggagcgctctctggatggcaccacgttcagcccctggcagtattatgcagtcagtgac
acggagtgtttgacacgctacaacataactccaagacgggggccgcccacttacagagcc
gacgacgaagtcatctgcacctcctattattctagactgataccactggatcatggcgag
attcatacgtcactcatcaatggcagaccaagtgctgacgatccttcccccaggttgttg
gaatttacctctgcacgatatatccgccttcgattacaacgcatcaggactctcaacgct
gatctgatgacccttagccaccgggaacccaaagaccttgaccctattgttacaagacga
tattactattcaataaaggacatttctgttggagggatgtgcatttgctccggccatgct
agcaactgcccatgggatgaaactacaaagaaactgcagtgtctgtgtgaacataatact
tgtggagagagctgtaacatgtgctgtcctgggtaccaccagcagccctggaggcctggg
accatatcctctggtaacacatgtgaacaatgtaattgtcacaataaagccaaagactgt
tactatgatgaaaatgtcgccaatcagaagagaagcttgaatacagctgggcagttcaga
ggaggtggggtttgtattaattgcctgcagaacaccatgggaatcaattgtgaaacctgc
gtggatggatattatagaccacataaagtttctccttatgaggatgaaccttgccatccc
tgtgactgtgaccctgtggggtccctcagtgccatctgtgttaaggatgatcttcattct
gacttaaataaggggaagtggcctggtcaatgtccgtgtaaggaaggttatgcaggagaa
aaatgtgatcgctgccagtttggctacaagggttacccgaactgtgtgccctgtgactgc
aatctagctggcagtgtgaacgacgatccgtgcaccgacccgtgtctttgtaaggaaaat
gtcgaggggaagaattgtgaccgctgcaaaccaggcttctataacttgaaggaaagaaac
ccccagggctgctctgagtgcttctgctttggtgtctccgatgtctgcgacagcctttct
tggcccattggtcaggtgaatgatatgtccgggtggctggtcactgacttggtcagtcca
aataagatccattctcagcaagaggcgctgggtgggcgccatcagatcagcatcaacaac
accctggtcatgcagagactgacttctaagtactactggtcggcccctgaggcctacctt
ggaaataagctgacctcttttggtgggttcctgaaatacacagtgtcatacgatattcca
gtggagacagtggacagtgacctcatgtctcatgcggatatcatcatcaagggaaatgga
atcactttaagcacacaggctgagggcctatcactgcaaccctatgaagagtacttcaat
gtggttagacttgtgcctgagaatttccgagacttccataacaaaaaacagatcgatcgt
gaccagctaatgaccgtcctggccaacatgactcatctcctgatcagagccaactacaat
tctgcaaaaatggctctttacaggttggattctgtctctctggacacagcaagccctaat
gctatagacctggcagtagccactgatgtggagcactgtgaatgcccgccaggctacaca
gggacgtcctgcgagtcctgcctctctggctattatcgagttgatggaatactctttgga
ggaatctgtcagccctgtgaatgccacggccacgcgtcggagtgtgatgttcatggagtt
tgctttgcatgtgcccacaacaccactggggaccactgtgagcagtgcctacctggcttc
tacggggtgccttcccatgggacttctggggactgccagccctgtgcctgccctctctcc
acagcctccaacaatttcagtcccacctgccatctcgaaggagacgaagtcatctgtgac
cagtgtgctccgggttattcaggagcttggtgtgagagatgcgctgatggttactatgga
aacccaacagtacccggggaatcctgtgtgctgtgtgactgcaatggtaatgtcaacccc
tctgagcctggccactgtgactctgtcaccggggaatgcctgaagtgtgtgggaaacacc
gacggccctcactgcgaaaggtgtgcagatgggttctacggggatgctgtgactgccaaa
aattgccaagcctgtgattgccatgagaaaggttccctttctgatgtgtgccatcttgag
actggactctgtgactgcaaaccccacgtgattggacagcagtgtgaccagtgcctgcca
ggctattatgggctggacacaggacttggctgcttaccctgtaactgcagcccggcaggc
tccatgtcggacgaatgcacagaggaaggacagtgttactgcattccaggtgtgactggg
aaaaggtgcgacaggtgttcacatggcttctatgcctaccaggatggtggctgcacatcc
tgtgactgtgctcatactcagaataattgtgaccctgaatctggaaagtgcatctgccct
cctcatacttggggtctggaatgtgaaaaatgcgaggaagggtactggggtttggacccg
gagcatgggtgccaggcctgcaattgcagtcatgaggggtcagccaatccccagtgtgac
atgctttctggtcactgccaatgcaagcaggaatttggtgggaagaggtgcgatcagtgt
tccttgggttacagagactttcctgactgtgttccctgtgactgcgacctgagggggaca
ctggtggacacctgtgacctggaacagggtctctgtagctgtgcagagaaaaccggcacc
tgttcttgcaaggaaaacgtgtttggcctccagtgcagcaagtgtcgagttggcaccttt
gccctgcgtgcagacaaccctctgggatgcagcccctgcttctgctttgggctgtcgcac
ctctgctcggagttggagggatacgtgaggacccgggtgacgctggactccaaacagcct
cttctgcgtgtggtctctcagagcaacctgaagggcaccagtgagggggtgtactaccag
gcccccgacatcttgctggatgccaccactgtccgtcagcatgtccatggggagccattt
tactggaggctgccagaacagttccagggagaccagctcctggcgtatggtggcaaacta
aagtacaccatggccttctattcctctgatggcatcggcacctccaattatgagcctcaa
attctcatcaaaggaggtcgaaccagaaagcaagtcatttacatggatgcaccagcacca
gagaatggcgtgagacaggaccaggaagtggaaatgaaagagaacttttggaaatatttt
aactctgtttctgaaaaaccagtcacacattcggattttatgtccattcttagcaatatt
gagtatatcctcatcaaggcatcctatggtcaaggactacagcaaagcagaatctcaaac
atttcaatggaggttggcacaaaggctacagagctgcaccctgagggagaggtggcttcc
ctgttagagaattgtctctgtcccccgggcacagctggattctcatgtcaggactgtgcc
cctgggtactacagagggaagcttccagaaggcagcggcaggggaccccgccccctgctt
gctccttgtgtgccctgcaactgcaataaccacagtgagacttgtgaccccgaaactggg
aagtgcctgaactgccatgataatacagctggtgaccactgtgacgtgtgcgctcctggc
tactatggaaaggtgactggctccgcccgggactgttctccgtgcacctgtcctcacccc
tacccttccagctttagccccacttgtgtcttggaaggtgatggaggtttccgttgcgat
gcctgtgctctgggctatgaaggacaatattgtgaaaggtgctcctcaggctaccacggg
gatcctcagataccaggtggcagttgccagaagtgtgactgcagtccacaggggtctgtt
cacagtgactgtgaccgcatctctgggcagtgcacctgcaggccaggggccacggggatc
cgatgccaggaatgccaaccgagacacattctggtggaaagcaattgtgtttcttgtgat
gatgagtgtgcaggtgtgttgctgaatgacttggatgatgttggcaatgccattctttct
atgaacctcactggcatcttccctgtcccacatggaattttgtcaaacttggaaaataca
actaaatatctccaggagtctttattaaaagcaaatacccaaaagaattgggcagggatt
caactggaaggtgttgcagaacagacggaggacctgcaaaagcagctcactagagtgtta
acaaatagccagcaggtgaacagggaaactgagaatatccttgaccagagtcaagacctg
gccacattcatcaagaggctgcatcagagcatcagagaaatccttgaaaaggcaacaact
ttaaatcagaccttggatgaagattttcaactacccgattctgctcttcacaatatccaa
cagaacatttcatctttgctggaaattatacagaaaaggaatttcacacacttgcaccaa
aatgccacccttgaactcaaggctgctgaagatttattgtcacaagttcaaaagcattac
caaaagccacaggaagagttggaggtattaaaaaaaacagccaaaggcttcctttcaaag
caccacagtgaactgagggcagcagaggagctcctgagggatgcggagaccaagacccag
gagaccaaccgcctactgctcattgtcaaggccaatctgagagaattcagagataaaaag
cttcgccttcaagaagaaccaaatttgacctcaaagctaattgccaaaggaagaggattg
atagatgcggctagtgcacatggagatactacacaaaatgctctagcacagttggagcat
caccgggatgagctacttctgtggactgccaaactcaggcaacatgtagatgacctggtc
atgcagatgtccaaaaggaaagcaatcgatcttgtccacagagccgaggaccatgccact
gagctccagagactagcaggtgttttggaccgtggccttaaaaatgtcagacatgtgacc
ctgaatgccaccagtgccgctcatgtccactataaccttcagagcctcacagaagaatca
gagaaactggccaacgatgctcacaggactgtgagtgagaccagcctgttctcagaatcc
ctcctttctaatgggagagcagctctgcagcgcagtgccagatttctaagcgaaagcaac
aacctcaacagaaagcaccaaggtattactttgaagctgagtaaattgagacacagggca
aatggatttcaagagaacacagatgaaattactagacagaccaatgcatcactcttgata
cttagagcaattcctgaaggtgtgagagtcaaaggaactaaaaccaaagagctagccatg
tctgccaaccagagtgcattgagtacactgaaggatgtcgtgggtctgagccagaagctg
tttaacacctcaactgacctgtccaggatgaacaccacattgcaagagacgaatgaactt
ctgcgagactcctcggtgaccaccctgttggctggaagaaaagttaaagacatggaaaca
caagccaaccttttatttgatcggctgaagcctttgaagacgttacaggagaacctgagc
agaaatttatcagaaattagactgctgatcaaccaggcacggagacaagcagcttctatt
aaagtcgctgtggctgctgacagagactgtatccgggcctaccagcctcagatttcttct
agtaactataacaccttgacactgaatgttaagacgcctgaacccgacaacctgcttttc
taccttggtagcagcaccagttctgatttccttgcagtggagatgcggcgggggaaagtg
gccttcctctgggacgtgggctctgggtccacacgactggaatttccagactttcccatt
gatgacaaccagtggtacagcatccatgcaaccaggtttggaaacgttggttcattgagt
gtaaaggaaatgagctcaactcaaaagccaccaatgaaaacaagtaaatcccctggaatg
gctaatgtgctggatgtgaacaattcaacactcatgtttgttggaggacttgggggacaa
atcaagaaatcttctgcagtgaaggtgactcattttaaaggctgcatgggagaagccttc
ctgaatggcaaatccattggcctctggaactacgtggaaagggagggcgagtgcgatggc
tgcttctcaagcccccagaatgaagactcttccttccattttgacgggagtggatactct
gttgtagagaagacgctccgggccactgtgactcagatcatcatgctctttagtaccttc
tcacctaatggtcttctcctctacctggcttcaaatggcactaaagacttcttatccatc
gagttggtccaggggagagttaaagttgcagttgacctgggttcaggacctcttgttctt
atgacagacagacggtataacaatggaagctggtacaaaattgccttccagagaaaccgg
aagcaaggactcctagctgttattgatgcatatgacactagtgataaggagaccaagcaa
ggggaaactccaggaccatcttctgatctcaatcgactagaaaaggacctgatttatgta
ggtggagtgccttggtcaagagttgtaaggaaaggtatcaccagcaaaagctacatgggc
tgtatcaggaacctggaaatatccagatcaacctttgatttgctcagaaattcctatgga
gtgagaaaaggctgtaggttggagcctatccagagtgttagcttcctgagaggcggctat
gtggagttgccaccgacgtctttgtcaccagaatcagaattgctgggcacatttgccacc
cagaacaacagtggcatcatcctggctgccctcggcagggatgcagagaggcagaatcga
cgtcaggcacatgtgcccttcttttccatcatgctggttgaaggccacattgaagtacac
gtgagttctggggatggaaccagcttgaggaaggctctcttgcatgctcccatgggcacc
tatggcgacggacaagagcattccatctccttgattaggaatcggagaattatcactgtc
cagttggatgagaccagtcctgtagaattgaaattgagtgctctggcagagagcaagaca
ataaacatatccaacctatacataggagggattcctgaggatgaggaaataccgatgctc
aaaatgaggaaatcattccagggctgtattaaaaacctgatcttcaacatggaacttttg
gatttcacccgtgccgttggctatgaacaagcagacttggacacctgcttgctttcagaa
aggcccaagctggcccttcctggagaggacagtgagttcctgccagagccctcaactcta
ccacttcctgaacagtgtgcagtggacattgctccaggttatgtgcctggtgcttaccag
tttggcctctcacaaagcagccacttgatgttgccttttaatcagtcagctgtcagaagg
aagctcttggttcagctaactatccggacatttgcctccagtggtctgatttactacatg
gctcatcagaaccaagtggactatgccacactccaactccacgggggctatctccatttc
atgtttgaccttggcaaaggccgaaccaaggtcactcaccccacgctgctcaatgatggc
aagtggcacacggtcaagacagagtactttaaaagaaaaggagttatggctgttgatggc
caagaatcccccatggtgaccatggtgggagatggaaccacactggacgtggaggggatg
ctgtacctgggaggccttccctcccagtacagggccaggaacattggaaatatcacccac
agcattcctgcctgcattggtgaggtgtcagttaacagcaaacagctggacaaggacagc
ctagtgtctgcctttgcagtaggcaggtgctataccgtggcccaagaaggaactttcttt
gatggaagtggatatgcagctcttgtcaaagaaggctatagagtccggtcagatttaaac
atcacactcgagtttcgtacctcctcagaaaatggtgtcctcctggggatcagcagtgcc
aaagtggatgccattggcctagagattgtcagtggcaagctcttgtttcatgtcaacaac
ggtgctggtaggataacaaaggatgtatttcagatgtttcaagaaattattacaaataat
aaacatctgttaacacacttgaaattatttttgttcctattgtgctctcttatctcattc
cacaaaattaaacaggatgtgtcttttttcctttctgtaacagctaatgtcaagcaaaac
tgcctaagcagccgggcctcgttccgggggtgtttgaggaagctcaccctgattaaaggc
caacaggtgcagtcttatgacttcaacacagcttttgacctacaaggagttttccctcat
tcctgtccaggggctgagtcctga
DBGET
integrated database retrieval system
