Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101964551
Help
Entry
101964551 CDS
T10664
Symbol
Nrxn1
Name
(RefSeq) neurexin-1
KO
K07377
neurexin
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
101964551 (Nrxn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iti04131
]
101964551 (Nrxn1)
Membrane trafficking [BR:
iti04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
101964551 (Nrxn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
101964551
NCBI-ProteinID:
XP_040127253
LinkDB
All DBs
Position
Unknown
AA seq
1550 aa
AA seq
DB search
MGTALLQRGGCFLLCLSLLLLGCWAELGSGLEFPGAEGQWTRFPKWNACCESEMSFQLKT
RSARGLVLYFDDEGFCDFLELILTRGGRLQLSFSIFCAEPATLLADTPVNDGAWHHVRIR
RQFRNTTLFIDQVEAKWVEVKSKRRDMTVFSGLFVGGLPPELRAAALKLTLASVREREPF
KGWIRDVRVNSSQALPVDSGEVKLDDEPPNSGGGSPCEAGEEGEGGVCLNGGVCSVVDDQ
AVCDCSRTGFRGKDCSQEDNNVEGLAHLMMGDQGKSKASMVPSHLPHLSSGKEEYIATFK
GSEYFCYDLSQNPIQSSSDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLG
SGAFEALVEPVNGKFNDNAWHDVKVTRNLRQHSGIGHAMVNKLHCSVTISVDGILTTTGY
TQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNNDVRLELSRLAKQGD
PKMKIHGVVAFKCENVATLDPITFETPESFISLPKWNAKKTGSISFDFRTTEPNGLILFS
HGKPRHQKDAKHPQMIKVDFFAIEINLILNLANDKFQGSCILNYISCHWTSGEMSALQEF
TLKQMKERKGIIKTLCALLKPLYSLVLATGTISVNTLRTPYTAPGESEILDLDDELYLGG
LPENKAGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRQMAEIQSTAGVKPSCSRETA
KPCLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCEREATVLSYDGSMFMKIQLPVVMHT
EAEDVSLRFRSQRAYGILMATTSRDSADTLRLELDAGRVKLTVNLDCIRINCNSSKGPET
LFAGYNLNDNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLEFHNIETGIITERRY
LSSVPSNFIGHLQSLTFNGMAYIDLCKNGDIDYCELNARFGFRNIIADPVTFKTKSSYVA
LATLQAYTSMHLFFQFKTTSLDGLILYNSGDGNDFIVVELVKGYLHYVFDLGNGANLIKG
SSNKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQITAGARNLDLKSDLYIGGVAKETYK
SLPKLVHAKEGFQGCLASVDLNGRLPDLISDALFCNGQIERGCEGPSTTCQEDSCSNQGV
CLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGGGQITYKWPPNDRPSTRADRLAIGFS
TVQKEAVLVRIGSSLGLLDYLKLNLHQGKIGVKFNVGTDDIAIEESNAIINDGKYHVVRF
TRSGGNATLQVDSWPVIERYPAGNNDNERLAIARQRIPYRLGRVVDEWLLDKGRQLTIFN
SQATIIIGGKEQGQPFQGQLSGLYYNGLKVLNMAAENDANIAIVGNVRLVGEVPSSMTTE
STATAMQSEMSTSIMETTTTLATSTARRGKPPTKEPISQTTDDILVASAECPSDDEDIDP
CEPSSGGLANPTRVGGREPYPGSAEVIRESSSTTGMVVGIVAAAALCILILLYAMYKYRN
RDEGSYHVDESRNYISNSAQSNGAVVKEKQPSSAKSANKNKKNKDKEYYV
NT seq
4653 nt
NT seq
+upstream
nt +downstream
nt
atggggacggcgcttctccagcgcgggggttgctttctgctntgcctctcgctgctgctc
ctgggctgctgggcagagctgggcagcgggctggagttcccgggcgctgagggccagtgg
acgcgcttccccaagtggaatgcctgctgcgagagcgagatgagcttccagctcaagacg
cgcagcgcccgcggcctggtcctctacttcgacgacgagggcttctgcgactttctggag
ctgatcctcacccgtggtggccgcctgcagctcagcttctccattttctgtgccgagccc
gccacgctactggccgacactccggtcaacgacggcgcctggcaccacgtgcgcatccgt
cgccaattccgaaacaccacgctcttcatcgaccaggtggaggccaagtgggtggaagtg
aagtccaagcgcagggacatgacggtgttcagtggcctcttcgtgggtggactgcccccg
gaactgcgggccgcggcactcaagctcacattggcctcggtgagggagcgagagcccttc
aaagggtggattcgcgacgtgagggtcaattcctcccaggccctgccagtggacagcggg
gaggtgaagctggacgatgaaccgcccaacagcggcggtgggagcccgtgcgaggctggc
gaggagggcgagggcggggtgtgcctcaatggaggcgtgtgctctgtggtggacgaccag
gcggtgtgcgactgctcgaggaccggcttccgtggcaaggactgcagccaagaagacaac
aatgtggaaggtctggcgcacctgatgatgggcgaccaaggtaaaagtaaagcatccatg
gtgcccagccatttaccacacctttcttcaggaaaagaagaatacattgccactttcaag
ggatctgaatacttctgctacgacttgtctcaaaaccccattcaaagcagcagcgatgaa
ataactctgtcctttaaaacccttcagaggaatggactcatgcttcacaccgggaaatca
gcagattatgtcaatcttgccctgaaaaatggagctgtctctctggtcattaatttggga
tcaggggcctttgaagcactagtggagcccgtgaatggaaagtttaatgataatgcctgg
catgatgtgaaagtcaccaggaatctgcgtcagcactcaggcattggacacgctatggta
aacaaactacattgttcggtgacaatatcagtggatgggattcttaccacaacgggctac
acgcaagaagattataccatgctgggttctgatgactttttctatgttggaggcagtccc
agcacagccgacctcccagggtcaccagtcagtaacaactttatgggctgtctcaaagag
gttgtatataaaaataatgatgtaaggctggaattatctcgacttgccaagcaaggagat
cccaagatgaagatccatggagtggtggcatttaaatgtgaaaatgtcgcaactttggac
ccaatcacttttgaaactccagagtcttttatctctttgccaaaatggaatgcaaagaaa
acaggctccatatcctttgatttccgtacaacagagccaaatggcctcattttattcagt
catggcaagccaagacatcaaaaagatgccaagcacccacagatgataaaggttgacttc
tttgccattgagataaatctaatcttgaatttggcaaatgacaaatttcagggttcttgt
attctcaactatatctcatgtcattggacatctggagaaatgtctgccctccaggagttc
acccttaagcagatgaaagagagaaagggaataattaaaacactttgtgctctgttgaaa
cctctgtattctcttgtcttggcaacaggtaccatttctgtcaacacgctgcgcacaccc
tacactgctcctggagagagtgagatcttggacttggatgatgaattgtacctggggggc
ttaccagaaaataaggctggccttgtgtttcccaccgaggtgtggactgctctgctcaac
tacggctacgtgggctgcatcagggatttgttcattgatggccaaagcaaagatatccgg
caaatggctgaaattcaaagcactgctggagtgaagccctcctgctccagggaaacagca
aaaccgtgccttagcaatccttgcaaaaataatggcatgtgcagggacgggtggaacaga
tatgtctgtgattgttccggaacaggctatcttggcaggtcctgtgagagagaggccacg
gttttgagctatgacgggagtatgtttatgaaaatccaactcccggtggtgatgcacacg
gaagcagaggacgtgtccttacggttccgatcccagcgtgcctatggcattctgatggcg
accacgtccagagactccgcagacaccctccgcctggagctagacgcggggcgagtgaaa
ctgacggtcaatctagattgtatcaggattaactgtaattccagcaaaggtcccgagacc
ctttttgctggctataacctcaatgataatgagtggcacactgtgcgtgtggttcgccga
ggaaaaagtttgaagttaacggtggatgatcaacaggccatgacaggtcaaatggcaggt
gaccatacaaggctggagttccataacatagagactggcatcatcacagaacgtcggtat
ctttcttctgtcccctccaacttcattggacacctgcagagcctgacatttaatggaatg
gcatacattgacttgtgtaaaaatggtgacatcgattattgtgagctcaatgccagattt
ggcttcaggaacatcatagcagaccctgtcacattcaagaccaaatcgagctacgttgcc
ttagctaccctgcaggcctacacttctatgcatcttttcttccagttcaagactacatcc
cttgatgggctaattctatataacagtggggatggaaatgactttatcgtagttgaatta
gttaaagggtacttacattatgtgtttgatttgggaaatggtgctaacctcatcaaaggg
agttctaataaaccactcaatgacaatcagtggcacaacgtgatgatatcaagggacacc
agcaatctccacactgtaaagattgacacaaaaatcacaacccagatcaccgcaggagcc
aggaatttagacctgaagagtgacttgtatataggaggagtagctaaagaaacatacaaa
tccttgccaaaactcgtccatgccaaggaaggctttcaaggctgcctggcatcggttgat
ttaaatggacggcttccggacctcatctcagatgctcttttctgcaatggacagattgag
agaggatgtgaagggcccagcacaacctgccaagaggactcatgttccaatcaaggtgtc
tgcttacagcagtgggatggcttcagctgtgactgtagcatgacttccttcagtgggcca
ctctgcaatgaccctgggacaacgtatatctttagcaaaggtggaggacaaatcacgtat
aagtggcctcctaatgaccgtccaagtacgagagcagacagactggccatagggtttagc
actgttcagaaagaagcagtcctggtgaggattggatcttcacttggcttgttagattac
ttaaagttaaatttgcaccaaggaaaaattggagttaagtttaatgtcgggacagatgac
atcgctattgaagagtccaatgcaatcattaatgatgggaagtaccatgtggtccgtttc
acgaggagtggtggcaatgccacgttacaggtggacagctggccagtgatcgagcgctac
ccagcaggaaacaatgataacgagcgcctggcgattgctagacagcgaattccatatcga
cttggtcgagtagttgatgaatggctactcgacaaagggcgtcagctcacaatcttcaat
agccaagcaaccataataattggcgggaaagagcagggccagcccttccagggccagctc
tctgggctttactacaatggcttgaaagttctgaatatggcagccgaaaacgatgccaac
atcgccatagtgggaaatgtgagactggttggtgaagtgccttcctctatgacaactgag
tcgacagccactgccatgcagtcagagatgtccacatcaattatggagaccaccacgacc
ctggcgactagcacagctagaagaggaaagccacctacgaaagaacccatcagccagacc
acagatgacatccttgtggcctcagcagagtgtcccagcgatgatgaggacattgacccc
tgtgagccgagctcaggtgggttagccaaccccacccgagtaggagggagagagccgtac
ccaggctctgcagaagtgatccgggagtccagcagtaccacgggcatggtcgtcgggata
gtagctgcagctgccctatgcatcctcatcctcctctatgccatgtacaagtacaggaac
cgggatgaaggctcataccatgtggatgagagtcgaaactacatcagtaactcagcacag
tctaacggggctgtggtaaaggagaaacaacccagcagtgcgaaaagcgccaacaaaaat
aagaaaaacaaggataaagagtattacgtctga
DBGET
integrated database retrieval system
