Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101964626
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Entry
101964626 CDS
T10664
Symbol
Pms2
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03430
Mismatch repair
iti03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
101964626 (Pms2)
03460 Fanconi anemia pathway
101964626 (Pms2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
iti03400
]
101964626 (Pms2)
DNA repair and recombination proteins [BR:
iti03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
101964626 (Pms2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
101964626
NCBI-ProteinID:
XP_040134537
LinkDB
All DBs
Position
Unknown
AA seq
708 aa
AA seq
DB search
MEGIEGPSKELAKAIKPIDRKSVHQICSGQVVLNLSTAVKELVENSVDAGATNIDLRLKD
YGVDLIEVSDNGCGVEEENFEGLALKHHTSKIQEFADLTQVETFGFRGEALSSLCALSDV
TISTCHTSAKVGTRLVFDHNGKIVQKTPYPRPRGTSVCVQQLFYTLPVRHKEFQRNIKKE
YAKMVQVLHAYCIISAGVRISCTNQVGQGKRQPVVGTSGSSSIKENIGSVFGQKQLQSLI
PFVQLPPSDSVCEEYGLSCSDALHNLFYISGFISGCAHGVGRSSTDRQFFFINRRPCDPA
KVSRLVNEVYHIYNRHQYPFVVLNISVDSECIDINVTPDKRQILLQEEKLLLAVLKTSLI
GMFDSDINKLNVNQQPLLDIEGKKNAVTEYILFRSVQIKQSLLDPSFIPLPDNFQPLVCT
ASTNYHILHFELQPNISSHLLQLFKPDTVFCRRRETYQRVLRPTQVLPKDHSPRELEHMQ
TVLEEEESAVTSVLSVGSMLSSLHAALLLEARPHGKTMFAEMEVLGQFNLGFIITKLKED
IFLVDQHAADEKYNFEMLQQHTVLQAQRLIAPQTLNLTAVNEAVLIENLEIFRKNGFDFV
IDEDAPVTERAKLISLPTSKNWTFGPQDIDELIFMLSDSPGVMCRPSRVRQMFASRACRK
SVMIGTALNTSEMKKLITHMGEMDHPWNCPHGRPTMRHIANLDVISQN
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaattgagggtcccagtaaggaacttgctaaagccatcaaacctattgaccgg
aagtcagttcatcagatttgttctgggcaggtagtactgaatctcagcactgctgtgaaa
gaattggtagaaaatagtgtggatgctggtgctactaatattgatctaaggcttaaagac
tatggagtggatctcattgaagtttcagacaatggatgtggggtagaagaagaaaatttt
gaaggcttagctctgaaacatcatacttctaagattcaggagttcgctgacctcactcag
gttgaaacttttggctttcggggggaagctctgagctcactttgtgcactgagtgatgta
actatttctacctgccacacatctgcaaaggttgggactcgattggtgtttgatcataat
gggaaaattgtccagaaaaccccctatccacgacccagagggacatcagtctgtgtgcag
caattattttatacgctacctgtgcgccataaggaatttcaaaggaatattaaaaaggag
tatgccaaaatggtccaggtcttacatgcatactgcatcatttcagcaggtgtccgtata
agttgcaccaatcaagttggacaaggaaagcgacagcctgtggtaggcaccagtggaagc
tccagcataaaggaaaatattggctctgtgtttgggcagaagcagttgcaaagcctcatt
cctttcgttcagctgccccctagtgactctgtctgtgaagaatatggtctgagctgttcc
gatgctctacataatttgttttatatctcaggcttcatctcaggctgtgcacatggtgtt
ggcaggagctcaactgacagacaatttttcttcatcaatcggcggccctgtgacccggca
aaggtttccagacttgtgaacgaggtctaccatatatataatcggcatcaatatccattt
gttgttcttaacatttctgttgattcagaatgtattgatatcaatgtaactccagataaa
aggcaaattttactacaagaagagaagcttttgttagcagttttaaagacctctttgata
ggaatgtttgacagtgatataaacaaacttaatgtcaatcagcagccactgttggatatt
gaaggtaagaaaaatgcagtgacagaatatattcttttcagatcagtccaaattaagcaa
agtcttcttgaccccagttttatccctcttcctgacaatttccaacccttagtgtgcact
gcctccaccaactaccacattctgcattttgagttacaaccaaacatatcaagccatctt
ctacagttgtttaaaccagatactgttttctgtagaaggagagaaacctaccaaagagtc
ttgaggcccacacaggttcttcccaaagatcattctcctagggagttggagcacatgcag
acagttctagaagaggaggaatctgctgttaccagcgtattgagtgttgggtccatgctt
tccagtcttcatgctgctttactcctggaggctagaccacatggtaaaacaatgtttgca
gagatggaggtccttggtcagtttaacttgggatttataataaccaaactgaaggaggac
atcttccttgtggaccagcatgccgctgacgagaagtacaacttcgagatgctgcagcag
cacactgttctccaggctcagaggctcattgcacctcagaccctcaacttaactgctgtc
aatgaagctgtcctgatagaaaatctggaaatattcagaaagaatggctttgattttgtc
attgatgaagatgctccagtcaccgaaagggctaagttgatttccttgccaaccagtaaa
aactggacttttggaccccaagatatagatgagctgatctttatgctgagtgacagccct
ggggtcatgtgccggccatcccgagtcaggcagatgtttgcctccagagcctgtcggaag
tctgtgatgattggcaccgctcttaacacaagcgagatgaagaagctcattacccacatg
ggtgagatggaccacccttggaactgtcctcatggaaggccaaccatgaggcacattgcc
aatctggatgtcatttctcagaactga
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integrated database retrieval system
