Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101964634
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Entry
101964634 CDS
T10664
Name
(RefSeq) LOW QUALITY PROTEIN: toll-like receptor 11
KO
K14142
toll-like receptor 11
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti05145
Toxoplasmosis
Brite
Pattern recognition receptors [BR:
iti04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
101964634
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
101964634
NCBI-ProteinID:
XP_040131313
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Position
Unknown
AA seq
1085 aa
AA seq
DB search
MGDCVIHLWQIPTTSAVIGYPTKPVPRKVGDVWILPYETFYWLTWNDTSFYVPADATYSL
GKSTMIAFNLVSDEPLTSDITISMPKSTLMDLGNYRLLTCHPMDYMVRRWQNITYNETLP
LKVGCHIHYNTMMIEHMNATRKQHLFRRINSTDPDYTNRLLSDVIFISNHTFGLHVFVPP
PPESQPYEEAKKAVETLNKHFAEHGKIIEAVHNQTTKMIQQFQGETHKIKKGLRLALSIT
EGFDTLILSPLILEAMSKMERRLVSAVLPLLLLDLMDCDLMSQAWTVPDCTIADSSLLSN
LSFYIPFCPLAPGLHIFASCSNVTDLTQTLRAVPQDIQALCLQGMVPVLPANAFGHSPFL
QLLRLQLGTLKIISEAFQGLNRLQYLSFEHHAPCCLSLFLPPDALVPLTFLSSLSFQGYC
LNYSQNIQLPITXRHLTLGHSCLIELQELQVLFSNLVLSFSPTAIPRPWSSFLEVLDLSY
NLKLNQAGVRALNGLQLHSLRLDGTPLNALGLLGSGLLHLDFLSLVGTGMEKLPXEVSGY
FELRALDLGRNRIQNIEDGDLKLLXSLEHLSLYSNGLKLLPIKFLNALPQLQSLNLSMNK
LGPALVLPDGLVSTNLRVLDLSNNELCVLPYGAFSFIPQLEKLWLSGNNISNLSSESLEG
LKQLKTLDLSWNKIKVLKPDWLSFLPALTSLNLLGTYLSHIPGKELQGPQRLSHLQLGSL
QMLDFYPPWPLALLSLEIWAETGIWFNNFNEDPFLFLEKLILQTSKVVLSPYNTSVHFPS
LRHLTLRGVSFFGFSSQQSQRSFPQFPVLEHLHFWSDYGSTENLQLFGMPKLRELGLGDL
NFHYESRSTKLELVLKEVPQLQVLALSHLNLGNLSMSSFRDLDHLQLLLFNSEWTLGLDS
NLQELIPQMPQYVYFSDVTFTCQCESFWVGPWATQAPNTFVYGLEKSICMANASDYSKTP
LLSFLSHQCARDLEFQGFLASFTLVLLFSILVLLGCPKWSWLHHLRTLFHVWWWKLCGRG
PRSQFHYDVFISYCEQDQDWVLEELVPTLEKSPPAGIGNAEDNLRVVHETQSGMRFCTMQ
VVSYA
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgggagattgtgtgattcatctatggcagatacctacaacatcagcggttattggatat
ccaacaaaaccagtaccacgtaaagttggagatgtatggatattaccatacgaaactttt
tattggctaacatggaatgatacgtcattctatgttcctgcagatgcaacctacagtttg
ggtaaatcaacgatgattgcttttaacttagtatcagacgaacccttaacatcggatata
acaatctctatgccgaaaagcaccttgatggacctaggtaactacagattgctgacatgt
catcccatggactatatggtgagaagatggcaaaacataacttataatgaaactctaccg
ttgaaagtaggatgccatatacattataacactatgatgattgaacacatgaatgcaact
cgtaagcaacatctattccgacgaattaactccacagacccagattacaccaacagactt
ttgtcagatgtcatttttatttccaatcacacatttggcctacacgtatttgtaccacct
cctccggaatctcagccatatgaggaagcaaagaaagcagtggaaaccttgaacaaacat
tttgcagaacatggtaaaatcatagaggctgttcataaccaaaccacaaagatgatacag
cagtttcagggtgaaacacataagattaagaagggtctgagactagcgttatccattact
gaaggatttgacactcttattctttctcctcttatcctagaagcaatgtcaaagatggaa
agacgtctggtctctgctgtcctccctctcttactgctggacttgatggattgtgatctc
atgagccaggcatggactgtccctgactgtaccatagcagatagctccctattgtcaaat
ctctccttctacatcccattttgtcccttggccccagggctgcatatttttgcatcatgc
tccaatgttacagacctgacacagaccctgagagcagtgccccaggatatacaggcactt
tgcctccagggcatggttcctgtcctgccagctaatgcatttggtcactcccccttccta
cagcttttgaggctacagctgggcaccctcaagattatatctgaggcctttcaaggattg
aatcggctgcagtacctttcctttgagcatcatgctccctgttgcttgagtctatttctc
cctccggatgccctggtgcctctcacattcctcagtagtctttcctttcaaggctactgc
ctgaattatagccagaacattcagttgccaatcaccnttaggcatctaaccctggggcac
agctgtttgatagagctgcaggagctacaagtgctcttctcaaaccttgtacttagtttt
tctcctacagccatccccagaccatggtcttccttcctagaggtgttggatttgtcttac
aacctgaagctgaaccaggcaggtgtcagagccttgaatggcctccagctccattccctg
agattggatggcaccccattgaatgcattaggtcttttaggctcaggactgctccatctg
gactttctgtcccttgtgggtacaggtatggaaaaactgcctngggaagtgtcaggttat
tttgagcttcgagcacttgaccttgggagaaatcgaatccaaaacatagaggatggagat
ctcaagctgctgnnttccttagaacatctcagcctttacagcaatggcctgaaattgctt
cccataaagtttctaaatgccttgccccagcttcaaagtctcaacctttccatgaataag
ctgggtccagccttggtgctcccagatgggctggttagcacaaacttgagagtgctagat
ctgtccaacaatgagttatgtgttctgccctatggagccttctcctttattcctcaactt
gagaagctgtggctgagtggcaacaacatctccaacttatccagtgagagcctggaggga
ctaaagcagctaaagacactagacctgagctggaacaaaattaaggtactaaaaccagac
tggctctcctttcttcctgctctcacctcactgaacctgctgggcacctatttaagtcat
atcccaggcaaggagctccaaggtccccagaggctgagccatctgcagctgggttcactt
cagatgctggacttctatcctccctggcctctagctctgctcagcttagagatatgggca
gaaacaggtatctggtttaataacttcaatgaagatcccttcttgttcctggagaagctg
atcttacaaacttccaaagtggtactgtctccatacaacacctcagttcattttccttcc
ctgcgtcatctcactcttcgaggcgtaagtttctttggcttctcaagtcaacagtctcag
agatccttccctcagtttcctgtcctggagcacctgcacttctggtctgattatgggagt
acagaaaacctgcaactatttgggatgcccaagcttcgagagctcgggctcggagatctg
aatttccactatgagtcaaggtcaacaaagctggagctggtactgaaggaagtgcctcag
ttacaggtactggcattgagccacctgaatcttgggaacctctccatgtccagtttcagg
gacttggaccacctgcagctactgctgttcaactctgaatggaccctggggttagacagc
aaccttcaggagttaatcccccagatgcctcaatatgtttatttctcagatgtcaccttc
acctgccagtgtgaaagcttctgggtggggccttgggcaacacaggcccccaacaccttt
gtgtatgggctggagaaatccatctgcatggccaatgcttctgactactccaagactcca
ctgctctccttcctttctcatcagtgtgcacgtgatcttgagtttcagggctttcttgcc
agctttactctggtgctcctgttctctatccttgtactgcttggctgccccaaatggtcc
tggcttcaccatctccggactctttttcatgtgtggtggtggaaactatgtgggcgtggc
cccagaagccaattccactatgatgtctttatatcctactgtgagcaggaccaagactgg
gtgctggaagaactggttcctacactggagaagtctcctccagcaggcataggaaacgca
gaagacaatctgcgagtcgtgcatgagacgcagagcggaatgaggttttgcactatgcaa
gttgtgagctatgcttga
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