Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101964776
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Entry
101964776 CDS
T10664
Symbol
Cdh15
Name
(RefSeq) cadherin-15 isoform X2
KO
K06809
cadherin 15, M-cadherin
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
101964776 (Cdh15)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
iti04515
]
101964776 (Cdh15)
Cell adhesion molecules [BR:
iti04515
]
Cadherins
Major cadherins
101964776 (Cdh15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Fibulin_C
Big_9
Motif
Other DBs
NCBI-GeneID:
101964776
NCBI-ProteinID:
XP_005335475
LinkDB
All DBs
Position
Unknown
AA seq
785 aa
AA seq
DB search
MDATFLLALGLLSQSLGLSQGVAGLQPSTLYPWRPASALGRVRRAWVIPPISVSENHKRL
PYPLVQIKSDKQQLGSVIYSIQGPGVDEEPRGVFSIDKFTGRVFLNAMLDREQTDRFRLR
AFALDLGGSTLEDPTDLEIVVVDQNDNRPVFLQEAFTGHVLEGAAPGTYVTRAEATDADD
PDTDNAALRYSILEQGSPGLFSIDEHTGEIRTVQVGLDREVVAVYNLTLQVADMSGEGLT
ATASAIISLDDVNDNAPEFTRDQLSMEAAEAISGVDVGRLEVEDRDLPGSPNWVARFTIL
EGDPEGQFTIRTDPKTNEGVLSVVKPLDHESREHYELMVTVQNEAPLQAAAPRAQRGQAR
VSVRVQDTNEAPVFPESPLRTSLAEGAPPGTPVALFSARDPDTQQLQRISYSKDCDPEDW
LQVDRATGRVQTQRVLSPASPFLKDGWYRAIVLALDDGSPPSTGTGTLSIEIVEVNDHAP
VLAPPSPSSLCSEPDQGPGLLLGATDEDLPPHGAPFLFQLSPRFPELSRNWSLSQVNVSH
TRLRPRHQIPEGLHRLSLLLRDSGQPPQEREQPLNVTVCRCGPDGACLPGAAALRAGGAG
VSLGALAIVLASAILLLLLVLLAALRSRFQQPPRDKGLLRGLQDDLRDNILNYDEQGGGE
EDQDAYDINQLRHPTELPALSLPLGRPPLRRDAPFGHVPRQPHRVLPTSPADMASFISDG
LEAADTDPSVPPYDTALIYDYEGDGSVAGTLSSILSSHGDEDQDYDYLRDWGPRFARLAD
MYGHP
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggacgccacgttcctccttgccctcgggctgctgtcccagagccttggcctgtcccag
ggggtagctgggctgcagcccagcaccctgtacccctggcgccccgcgtctgcgctgggc
cgcgtccggagagcctgggtcatcccgcccatcagcgtgtcagagaatcacaagcggctc
ccgtaccccctggtgcagatcaagtcggacaagcagcagctgggcagcgtcatctacagc
atccaggggcccggcgtggacgaggagccccgcggcgtcttctccatcgacaagttcact
gggcgggtgttcctcaacgccatgctggacagggagcagaccgaccgcttcaggctaagg
gcttttgccctggacctgggaggatctaccttggaggaccccaccgacctggagatcgtg
gttgtggatcagaatgacaaccggcccgtcttcctgcaggaggcgttcacgggtcacgtg
ctggagggcgccgccccaggcacctatgtgaccagggctgaggccacggatgccgacgac
cccgacacagacaacgcggcgctgcggtactccatcctggagcagggcagccccgggctc
ttcagcattgatgagcacacgggcgagatccgcaccgtgcaagtggggctggaccgcgag
gtggtggccgtgtacaacctgacgctgcaggtggccgacatgtctggagagggcctcacc
gccacggcctccgccatcatctccctggacgatgtcaatgacaacgctcccgagttcacc
agggaccagttgtccatggaggctgcagaggccatcagtggagtggatgtaggacgcctc
gaggtggaagacagggacctacctggctcccccaactgggtggccaggttcaccatcctg
gaaggggacccggaaggacagttcaccattcgcactgaccccaagaccaacgagggcgtg
ctgtcagtggtgaagcccctggaccacgagagccgtgagcactatgagctcatggtgact
gtgcagaacgaggccccactgcaggcagctgccccccgggctcagcggggccaggccagg
gtcagcgtgagggtgcaggataccaacgaggcccctgtgttcccggagagcccactgcgg
accagcctggctgagggggcacccccaggaacccctgtggccctcttctctgccagagac
cctgacacacagcagctgcaaagaatcagctattccaaggactgtgatcccgaggattgg
ctgcaggtggacagagccacaggcagggtgcagacccagcgcgtgctgagccccgcctcc
cccttcctcaaggacggctggtaccgggccatcgtcctggccctggatgacggctctcca
cccagcaccggcacaggcaccctctccatcgagattgtggaggtcaacgaccatgcacct
gtgctggcccctccatcgcccagcagcctgtgcagtgaaccggaccaggggcctggcctc
ctcttgggtgccacagatgaggacctgcccccacacggggcgcctttccttttccagctg
agccccaggttcccagagctcagccggaactggagtctcagccaggttaacgtgagccac
acgcgcctgcggccacggcaccagatccctgagggcctgcaccgcctcagcctgctgctc
cgggactctgggcagccgccccaggagcgcgagcagccactgaacgtgaccgtgtgccgc
tgtgggcccgacggcgcctgcctgccgggggccgctgcgctgcgggccgggggcgcgggc
gtcagcctgggcgcgctggccatcgtgctggccagtgccatcctgctgctactgctggtc
ctgctcgcggcgctccgctcgcggttccagcagccgccgcgggataagggtctgctgcgc
gggctacaggacgacctgcgggacaacatcctcaactacgacgagcagggaggcggggag
gaggaccaggatgcctacgacataaaccagctgcgccaccctacagaactgcctgctctg
agcctccccttgggacggccacccctgcgccgtgatgctccctttggccacgtgccccgc
cagccacaccgcgtgctccccaccagccctgctgacatggccagcttcatcagcgatggc
ctggaggctgcggacactgaccccagcgtgccaccctatgacacggctctcatatatgac
tacgagggggacggctctgtggcaggaacgctgagctccatcctgtccagccatggtgac
gaggaccaggactatgactacctcagggactggggcccccgctttgcccgcctggcagac
atgtatgggcatccatga
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