Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101964808
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Entry
101964808 CDS
T10664
Symbol
Erbin
Name
(RefSeq) erbin isoform X1
KO
K12796
erbb2-interacting protein
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
101964808 (Erbin)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_14
LRR_8
LRR_4
PDZ
LRR_LRWD1
PDZ_6
LRR_NXF1-5
LRR_5
PDZ_2
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
101964808
NCBI-ProteinID:
XP_005319610
UniProt:
I3M2B4
LinkDB
All DBs
Position
Unknown
AA seq
1459 aa
AA seq
DB search
MTTKRSLFVRLVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEE
LPKQLFNCQSLQKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVV
EASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTM
NRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKN
NIEMVEEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSVGGLIS
IEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQQLPPEIGNWKNITVLFLHSNKLETL
PEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPLIPLQKETDTETQKM
VLTNYMFPQQPRTEDVMFISDNESFNPSLWEEQRKQRAQVAFECDEDKDEREAPPREGNL
KRYPTPYPDELKNMVKTVQTIVHRLKDEETTEDPGRDLKPHDDQQVVNKDMGAKTSESTT
PVKSKVDDREKYMIGNSIQKITEPEAEISPGNLPVTANMKAPENVKHIVNHDDVFEESEE
LSSDEEMKMAEMRPPLIETSINQPKVVALSNNKKDDTKDTDSLSDEVTHNSNQNNSNCSS
PSRMSDSVSLNTDSSQDTSLCSPVKQTHIDISSKIRQEDENFNSLLQNGDILNNSPGEKF
KVHDKKDFNLPEYDLNIEERLVLIEKSVDSTATSDESHKLDHINMNLNKLVTNDTFQPEI
MERSKTQDIVLGTSFLSINSKREAEHLENGNKYPNLESINKVNGHSEETPQSPSRTEPQD
TSSSVDTGVSKSTEDLSPQRRGSIGSVVKSHSITNMDTGGLKIYDILSDNGPQQPSATVK
ITSGIDGKNIVRSKSATLLYDQPLQVFTGSSSSSDLISGTKALFKFDSNHNPEEPDIIRA
PTSDPQSTPQIYGPPQYNIQYSSNAPVKDTLWHSKQSPQIDTVNFPSQRLPRSESTENHS
YARHSANMNFSNHNNVRANTAYHLHQRLGPTRHGEMWAISSNDRLVPSVTRTTIQRQSSV
SSTASVNLGDPGSTRRGQIPEGDYLSYRELHSAGRTPPMMSGSQRPLSARTYSIDGPNAS
RPQSARPSINEIPERTMSVSDFNYSRTSPSKRPNARVSSEHSLLDPPGKSKVPHDWREQV
LRHIEAKKLEKSMLSRSFNSNFTAVSSSHYGSSRDLHGSQGSLALSIADGRGSGGHIFRL
PQTSNPGDPCQDDTFISGLQNYSSATLSHKDVLPDSLMKMPLSNGQMGQPLRPQANYSQI
HHPPQASVARHPSREQLIDYLMLKVAHQPPYTQPHCSPRQGHELAKQEMRVRVEKDPELG
FSISGGVGGRGNPFRPDDDGIFVTRVQPEGPASKLLQPGDKIIQANGYSFINIEHGQAVS
LLKTFQNTVELIIVREVSS
NT seq
4380 nt
NT seq
+upstream
nt +downstream
nt
atgactacaaaacgaagtttatttgtgcggttggtaccatgtcgctgtttacgaggggaa
gaggagactgtcactactctggattattcccattgcagtttggaacaggttcccaaagag
atttttacttttgaaaaaactttggaggagctctatttagacgctaatcagattgaagag
cttccaaagcaactttttaactgtcaatctctacaaaaactgagtttgccagacaatgat
ttaacaacgttaccagcatccattgcaaatcttattaatctcagggaactagatgtcagc
aaaaatggaatacaagagtttccagaaaatataaaaaattgtaaagttttgactgttgtg
gaggccagtgtaaacccaatttctaagctccctgatggattttctcagctgttaaaccta
acccagttatatctgaatgatgctttccttgaatttttgccagctaattttggcagatta
actaaacttcagatattagaacttagagaaaaccagttaaaaatgttgcctaaaaccatg
aatagattgacccagctggaaagactggatttgggaagtaatgaattcacagaagtgcct
gaagtacttgagcaactaagtggattgaaagaattttggatggatggtaatagacttact
tttattccagggtttattggtagtttgaaacagcttacatatttggatgtttccaaaaat
aatattgaaatggtggaagaaggaatttcagcttgtgaaaatctccaagacctcctgtta
tcaagcaattcacttcaacagctgcctgagactattggttcgttgaagaatgtcacaact
ttaaaaatagatgaaaaccaattaatgtatctaccagactctgtaggagggttaatatca
atagaagaactagattgcagtttcaatgaagttgaagctttgccttcatctattggacag
ttaactaacattagaacctttgctgcagatcacaattacttacaacaattacccccagag
attggaaactggaaaaatataactgtgctgtttctccattctaataaacttgagacactt
ccagaggaaatgggtgatatgcagaaattaaaagtcattaatttaagtgacaatagatta
aagaatttgccttttagctttacaaagctacaacaattgactgctatgtggctttcagat
aatcagtccaaacccttgatacctcttcaaaaagaaactgatacagagactcagaaaatg
gtgcttactaactacatgttccctcagcagccaagaactgaggatgttatgttcatatca
gataatgaaagttttaatccttcattgtgggaagaacagaggaaacagcgggcccaggtg
gcatttgaatgtgatgaagacaaagatgaaagagaggcacctcccagggagggaaattta
aagagatacccaacaccatacccagatgaacttaagaacatggttaaaactgttcaaacc
attgtacatagattaaaagatgaagagactactgaagaccctggaagagatttgaaacca
catgatgatcagcaagtagtcaataaagatatgggtgcgaagacttccgaaagtactact
ccagtaaaaagcaaagtggacgacagagaaaagtatatgataggaaactctatacagaag
atcactgaacctgaagccgagatcagtcctggaaatttaccagtgactgcaaatatgaaa
gcccctgaaaacgtgaagcatattgttaaccatgatgatgtttttgaggaatctgaagaa
ctgtcttctgatgaagagatgaaaatggcagagatgagaccaccattaattgaaacctct
attaaccagccaaaagtcgtagcacttagtaataacaaaaaagatgatacaaaggataca
gattctttatcagatgaagttacacacaatagcaatcaaaataacagcaattgttcctct
ccatctcggatgtctgattcagtttctcttaatactgatagtagtcaagacacttcactg
tgctctccagtgaagcaaactcatattgatattagttccaaaatcaggcaagaagatgaa
aactttaacagccttttgcaaaatggagatattttaaacaattcaccaggggaaaaattc
aaggttcatgataaaaaagattttaacttacctgaatatgatttgaatattgaagagcga
ttagttctaattgagaaaagtgttgattcaacagctacatctgatgaatctcacaaatta
gatcatatcaacatgaatcttaataaacttgtgactaatgatacatttcaaccagagatt
atggaaagatcaaagacacaggatatagtacttggaacaagctttttaagcattaattct
aaaagagaagctgaacatttagaaaatggaaacaagtatcctaatctggaatccataaat
aaggtaaatggacattctgaagaaactccacagtctcctagtaggactgaaccacaagac
accagttcttctgtagacactggtgtttccaaaagcactgaagatctctcccctcagaga
agaggttcaataggatctgtggtaaaatctcacagtataactaatatggacactggaggt
ttaaaaatttatgacattcttagtgataatggacctcagcagccaagtgcaacagttaaa
atcacatctggtattgatggaaaaaatatagtcagaagcaagtctgccacattattgtat
gatcaaccattgcaagtatttactggttcttcttcatcttctgatttaatatcagggaca
aaggcacttttcaagtttgattcaaatcataatcctgaggaaccagatataattagagcc
cccacaagtgacccacaatctacacctcagatatatggacctccacaatataatattcaa
tacagtagtaatgctccagtcaaagacactttgtggcactctaaacaaagtccccaaata
gatactgtcaattttccttctcagcgccttccaagatcagagagcacagaaaatcacagc
tatgctagacattctgctaatatgaatttctctaaccataacaatgttagagctaatact
gcataccatttacatcagagacttggcccaacaagacatggagaaatgtgggccatctca
tcaaatgaccgacttgttccttcagtaactcgaactacaattcagcgacaaagtagtgtg
tcttcaacagcctctgtaaatcttggtgatccaggttccacaagacgtggccaaattcct
gaaggagattatttatcatacagagagttacattcagcaggaagaactcctccaatgatg
tcagggtcacagagacctctttctgcacgaacatacagcatcgatggtccaaatgcatca
agacctcagagtgctcgaccctctattaatgaaataccagaaagaactatgtcagttagt
gatttcaattattcacggactagtccttcaaaaagaccaaatgcaagggtcagttctgag
cattctttattagatcctccaggaaaaagtaaagttcctcatgattggcgagaacaagta
cttcgacacattgaggccaaaaagttagaaaagagcatgctgtcaaggtcctttaattcc
aattttactgctgtaagcagttctcactatggcagctctagggatctgcatggcagccaa
ggtagtcttgccttgagtattgcagacggaagaggttctggtgggcacatttttcgactt
ccccagacatccaatccaggagatccttgccaggatgacacattcatttcaggactgcag
aactactcatcagctacacttagtcacaaagatgttcttccagacagcttgatgaaaatg
cctttgagtaatggacagatgggccagcctctcaggcctcaggcaaattatagtcaaata
catcacccccctcaggcatctgtggcaaggcatccctctagagaacaactaattgattac
ttgatgctgaaagtggcccaccagcctccatatacacaaccccattgttctcctagacaa
ggccatgaactggcaaaacaagagatgcgtgtgagggttgaaaaggatccagaacttgga
tttagcatatcaggaggtgttgggggtagaggaaacccattcagacctgatgatgatggt
atatttgtaacaagggtacagcctgaaggaccagcatcaaaattactgcaaccaggtgat
aaaataattcaggctaatggctacagttttatcaatattgaacatggacaagcagtgtcc
ttgctaaaaactttccagaatacagtagaactcatcattgtacgagaagtttcctcataa
DBGET
integrated database retrieval system
