Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101965005
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Entry
101965005 CDS
T10664
Symbol
Sh3tc1
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
Membrane trafficking [BR:
iti04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
101965005 (Sh3tc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
101965005
NCBI-ProteinID:
XP_040148074
LinkDB
All DBs
Position
Unknown
AA seq
1264 aa
AA seq
DB search
MKSPKEETTGEPAEMGWGPARPSGGHSSRHEVQSGAMHSPCGPEQAVPEEAKAPVRGASH
WAPLLKVPRPPSSAAGDQALNTGPGGTGGPMPVRRPPKTPPHGSYFLPQRGCWTQLLRPQ
PRGSDSGGWGSALDSASTCSWRTGASQPPPSLDNCPPGRDWPMTLKEGCPDLALQLLAVR
RKSGQPDPGLQQALRGRLRLMENESQEVARVLGAPRAGGPRWGLPCPFQSLRVTRPGLAG
FTHHCLENLLVDRAFWLLWPGEEEETAIQVHVEEDALRRTHQSLLAQEGPFFVLCPDHHV
RLTTGRQSVGKGPQVLRKASGHSLGDVALEADSSSPIPTTSGAAAAAAAPEPLIPFHQWA
LRAPWDPMDDSVGGPVTSDSSLMGLGQASAVADFQGSGPEEVSFHAGDLIEILGAQVPSL
PWCVGRHVASGQVGFVRTSHISMQGPVSELESVVFLDEGERVFFSSEGHLSEDTAQRLLS
RMAGTEVCSVHSLDLCVGKRLPEAQGAVQRRKPAVHTKRARLSQGHVHAHWWALMPEPSR
GMHTHAHTHTHIHTHTPCTHNHTCTHSHVCTHKHTHARTPTRTHRLAEAEGVQPEERDLK
QPEEALPYLERLLLLHRGLGAPSAAWPLSCYLLLADTYSRKCLPHLALSCIRVASLRTPG
SLASSLRSVDLVLWNAPQLHGQRTAAHSLPAQAAHYLRQALASSAAGTGRALRGLLYASL
AQLHSHHEQHGQAIAFMTRAVEADATAGARPVVDRLVVLAWLHLLHGQSLVALDILQSIL
DADVASEDQEGVIVNMAAIALKRTGRTRQAAEGYYRALRLARGLGQLRNQAVVLANFGAL
CLQASAVGLAQHYLLEAIRLFSQLPVGECGQDFTQVLLWTGHLCTRRALAQQGKCYYQWA
FLVAVETGHLESQLQAVQQLCHFYSSVMPNEAQSVIYHEFQLTLARRRADKALEGQLLEA
ISHLYLSLGTERAYKSALDYTKRSLGIFIDLQKKEKEAYAWLQAGKIYYILRQNELVDLY
IQVAQNAALYTGDPNLGLELFEAAGDIFFNGSWEREKAVSFYRDRALPLAVTVGNREAEL
RLCNKLVALLAALEAPQEGLEFAHEALALSITLGDRLNERVAYHRLAALHHRLGHGELAE
HFYLKALSLCSSPLQFEEETLYYVKVYLALGDIIFHDLKDPFDAAGYYQLALAAAVDLGH
KKAQLKIYSRLATIYHHFLMDREMSLFFYQKARTFASELNTRRTNLVPQRFCSRAPWLAP
GHLP
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atgaagagccccaaggaggagaccactggggagccagcggagatgggctgggggcctgca
agaccctctggaggccacagcagcaggcacgaggtccagagtggggccatgcactcaccc
tgtggcccggagcaggctgtgcctgaggaggccaaggcgccagtccgaggtgcctcccac
tgggcccccctcctaaaggtcccgagacctccaagcagtgccgcaggggaccaagccctc
aacacagggcctggggggacggggggtcccatgcctgtgaggcgccctcccaagactcct
ccgcatggctcctacttcctgcctcaacgtggctgctggacacagctgctcaggccccag
cccagaggctctgactctgggggctgggggtcagctctggactctgcctctacctgcagc
tggaggactggggccagccagccaccaccttccctggacaactgcccacctgggagagac
tggcccatgaccctcaaggagggctgcccagacctggctctgcagctgctggcggtgcgc
aggaagagtggacagccagaccccggcctgcagcaggccctgcggggccggctgcgcctg
atggagaacgagagccaggaggtggcccgcgtgctgggggctcccagggcaggtggccca
cgctggggccttccctgccccttccagagcctgcgggtgaccagacctggccttgcaggc
ttcacacatcactgcttggaaaacctgcttgtggaccgggccttctggctgctctggcca
ggcgaggaggaggagacggccatccaggtgcacgtggaggaggacgccttgaggcggacc
caccagagcctgctggcccaggaagggcctttctttgtcctgtgtcctgaccaccatgtg
agactgacgacgggccgccagagtgtggggaagggcccccaggtcctcaggaaggcttcg
gggcactccctgggggacgtggccctggaagcggactcttcaagccccattcccaccacg
tctggggcggcagcagcagcggctgccccggagcccttgattccgttccatcagtgggcc
cttagggccccctgggaccccatggacgactccgtgggtggacctgtgacgtctgacagc
tcactgatggggcttggccaggcctcagcggtggcggacttccagggctcagggcctgaa
gaggtgtccttccatgccggcgacctcatcgagatcctgggtgcccaggtgcccagcctg
ccctggtgcgtgggccggcacgtggcctcaggccaggtgggcttcgtgcggaccagccac
atcagcatgcagggcccagtgtctgagttggagagcgtggtcttcctggacgagggagag
agggtgttcttcagcagcgaggggcacctttcggaggacaccgcccagcgcttgctgagc
aggatggcgggcaccgaggtctgctccgtgcacagtctggacctctgcgtgggaaagcgt
ctccctgaggcccaaggtgcagtgcagcggaggaagccagccgtccacaccaagagagcg
aggctgagccagggacacgtgcacgcccactggtgggccctgatgcccgagcccagcaga
ggcatgcacacccacgcacacactcacactcacatacacacacacaccccgtgcacacac
aaccacacgtgtacacactcacatgtatgcacacataaacacactcatgcacgtacaccc
acacgtactcaccgcctggcagaagcagagggtgtgcagcctgaggagcgagacctcaag
cagccggaggaggccctgccctacctggagaggctgctgctgctgcacaggggcctgggg
gccccatccgccgcctggcctctgagctgctacctgctcctggccgacacctacagcagg
aagtgcctgccccacctggctctgagctgcatcagggtggcctcgctgcggaccccaggc
tcgctggccagctccctgaggagcgtggacctggtcctctggaacgccccccagctgcat
ggccagaggacggcggctcacagcctccctgcccaggccgcccactacctcaggcaggcg
ctggcctcctcggccgcgggcacggggcgggcccttcgcggcctgctgtatgccagcctg
gcccagctgcacagccaccatgagcagcacgggcaggccatcgccttcatgacgcgggcg
gtggaggccgacgccacggccggtgcgcgccccgtggtggaccgcctggtggtgctggcc
tggttgcacctgctccacgggcagagcctggtggccctggacatcctgcagtccatcctg
gatgcagatgtggccagcgaggaccaggagggtgtgattgtcaacatggcggccatcgcc
ctgaagaggacgggcaggacccggcaggcggccgagggctactaccgcgccctgcgcctg
gctcggggcctgggccagctgcggaaccaggcagtggtcctggccaacttcggggcgctg
tgtctgcaggccagtgccgtcgggctggcccagcactacctcctggaggccatcagactc
ttctcccagctgcccgtcggggagtgtggtcaggacttcacccaggtgctcctgtggacg
ggccacctgtgcacccgccgggccctcgcccagcagggcaagtgttactaccagtgggcc
tttctggtcgctgtggagacgggccacctggagagccaactgcaagccgtccagcagctg
tgccacttctatagcagtgtcatgcccaatgaggcacagagcgtcatctaccatgagttc
cagctcacactggcccgcaggagagccgacaaggcgttggagggacagctcctagaggcc
atcagtcatctgtacctgtcactgggcaccgagcgggcctacaaatccgctctggactac
accaagcggagcctggggatattcatcgacctgcagaagaaggagaaggaggcctatgcc
tggctgcaggcggggaagatctactacatcctgcgtcagaacgagctggtggatctgtac
atccaggtggcgcagaacgcggccctgtacacgggggaccccaacctggggctggagctg
ttcgaggcggccggagacatcttcttcaatggcagctgggagcgggagaaggctgtgtcc
ttctatcgggaccgggcgctgcccctggcggtcaccgtggggaaccgggaggcggagctg
cggctgtgcaacaagctggtggccctgctggccgcgctggaggccccgcaggagggcctg
gagttcgcccacgaggccctggctctcagcatcaccctgggtgaccggctgaacgagcga
gtggcctaccaccggctggccgccctgcaccaccggctgggccacggcgagctggccgag
cacttctacctcaaggccctgtcgctctgcagctcgccgctgcagttcgaagaggagacg
ctgtactacgtgaaggtgtacctggcgctcggcgacatcatcttccacgacctgaaggac
cccttcgacgccgcgggctactaccagctcgcgttggccgcggccgtggacctgggccac
aagaaggcccagctgaagatctactcgcgcctggccaccatctatcaccacttcctcatg
gaccgcgagatgtccctcttcttctaccagaaggccaggaccttcgcctccgagctcaac
acccgcaggaccaacctggtgccccagcgcttctgcagcagggccccctggctggccccc
ggccacctgccctga
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