Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101965006
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Entry
101965006 CDS
T10664
Symbol
Robo3
Name
(RefSeq) roundabout homolog 3 isoform X2
KO
K06755
roundabout, axon guidance receptor 3
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04360
Axon guidance
iti04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
101965006 (Robo3)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
101965006 (Robo3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
iti04515
]
101965006 (Robo3)
Cell adhesion molecules [BR:
iti04515
]
Immunoglobulin superfamily
ROBO family
101965006 (Robo3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
Ig_VEGFR-1-like_5th
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Ig_5
C2-set_3
Ig_PDGFR_d4
Motif
Other DBs
NCBI-GeneID:
101965006
NCBI-ProteinID:
XP_005339585
LinkDB
All DBs
Position
Unknown
AA seq
1387 aa
AA seq
DB search
MLRYLLKTLLQMNLFADSLAGDISNSSELLFGGFNSSLAALNHSTRPPSAPSLNETRIEP
EDAMPRIVEQPPDLLVSRGEPATLPCRAEGRPRPNIEWYKNGARVATAREDPRAHRLLLP
SGALFFPKIVHGRRARPDEGIYTCVARNYLGVAASRNASLEVAVLRDDFRQSPGNVVVAV
GEPAVMECVPPRGHPEPLVTWKKDSARLKEEEGRITIRGGKLMMSYTLKSDAGMYVCVAS
NMAGERESGAAELVVLERPSFLRRPVNQVVLVDAPVNFLCEAQGDPPPHLHWRKEDGELS
TGRYEIRSDHSLWIGRVSAEDEGTYTCVAENSVGRVEASGSLSVHVPPQLVTQPQDQMAA
PGENVAFQCETKGNPPPAIFWQKEGSQVLLFPSQSLQPTGRFSVSPRGQLNITEVQSEDA
GYYVCQAVSVAGSILAKALLEIKGASLDGLPPVILQGPANQTLILGSSVWLPCRVTGNPQ
PNVRWKKDGQWLQGDDHQFNLMANGTLYITSMQEMDMGFYSCVAKNSIGEAIWSGWLRKR
EDWGASPDPPTELSTLPGPPSQPVVTEITKNSITLTWKPNPQAGATVTSYVIEAFSQAAG
NTWRTVADGVQLETHTVSGLQPNTIYLFLVRAVGTWGLSEPSPVSEPVRTQDSHPTRPVE
DPWRGQRGMAEVAVRMQEPIVLGPRTLQVSWTVDGPVQLVQGFRVSWRAAGPNGGSWTVL
DLQTPSQQSTVLRGLPPGTQIQIKVQAQGQEGLGAESPFVTRNIPEEAPSGPPQGVAVAL
GGDGNSSITVSWEPPLPSQQNGVITEYQIWCLGNDSRFHLNRSVAGWARSVMLRGLLPGL
LYHTLVAAATSAGVGVTSAPVLVQLPSPPGVEPGLEVGPGLAERLARVLRDPAFLAGSGA
ACGALLLGLCAALYRRRKQRKELSHYTASFAYTPAVSFPHSEGLSGASSRPPIGLGPASY
PWLADSWPHPSRSPSAQEPRGSCCPSNPDPDDRYYNEAGISLYLAQTARGTAAPGEGPVY
STIDPAGEELQTFHGGFPQQPSGDPGTWSQYAPPEWSQGDSGARGGKVKLLGKPVQMPSL
NWPEALPPPPPSCELSCPEGPEEDLEGSSESEEWCPPMPERSHPIEPSSSGGCLVAPPQG
ENPSPTPSYGQQSTATLTPSPPDPPQPPSDLPHLHQMPRRVPLGPSSPLSVSQPTLSSYE
GKPAGLSAGLTSSHHLGPSPVPSTTSSAPGRTRQVPGEMTPPLQGPGARIRKKSKALHYK
REHSPGDLPPPPLPPPEEEVSWALGLRAAGSMSSLEREHSGERRVVQVVPLGAQRGPHPD
EEAWLPYGRPSFLSRGQATSNCSTAGSNSSRGSGSSRGSRGPGRSRSRSRSHSQSQRPGQ
KRREEPR
NT seq
4164 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgctacctgctcaaaacgctgcttcagatgaacttgttcgcggactccctggcc
ggggacatctctaactccagtgagctgctcttcggcggattcaattcctcgctggcggcg
ctcaaccacagtacgcggcctcccagcgccccctctctcaacgagacaagaattgagcca
gaagacgctatgccgcgcatcgtggagcagccaccagatctattggtctcccggggcgag
ccggccacactgccctgtcgcgctgagggccggcctcgacccaatatcgagtggtacaag
aatggagcacgcgtggccacggcacgcgaggatccgcgcgcgcaccgcctgctgctgccc
agcggcgccctcttcttcccgaaaattgtgcatgggcgccgtgctcgaccggatgaggga
atctacacttgtgtggcgcgcaactacctgggggttgcagctagtagaaacgcctctttg
gaagtagcagtcctccgtgatgatttccggcagtctcctggaaacgtggtggtggcagtg
ggggagccagcagtaatggaatgtgtgccccccaggggccacccagaacctttggtgact
tggaagaaggacagtgcaaggcttaaagaggaggagggaaggattacgattcgtggaggg
aagctgatgatgtcatacacgctcaagagcgatgctgggatgtatgtgtgtgtggcatcc
aacatggcaggagaacgggagagtggggcagctgaacttgtggtactggagcgtccctca
ttcctgcgaagaccagtaaaccaggtggtcctggttgatgcccctgtgaattttctatgt
gaggcgcagggggatcccccacctcatctacactggcgcaaggaggatggggaactgtcc
acaggcaggtatgagatccggagtgaccacagcctttggattgggcgagtgagtgctgaa
gatgagggaacttatacctgtgtggcggagaacagcgtgggccgtgtggaagcatcgggt
tccctcagtgttcacgtcccaccccagttggtaacccagccccaagaccagatggcagct
cctggagagaatgtggctttccagtgtgagaccaaaggaaaccccccacctgccatcttc
tggcagaaagagggaagtcaagtcctgcttttccctagccagtcacttcagcctacaggg
cgcttctcagtctctccaagaggacagctcaacatcactgaagtgcagagtgaggatgct
ggctactatgtatgccaggctgtcagtgtggctggcagcatcctggccaaggccctgttg
gagataaaaggagcctccttggatgggctccctcccgtcatcctccagggaccagccaat
cagacactaatccttggctcctctgtgtggctgccatgcagagtgactgggaaccctcag
cccaatgtccgatggaagaaggatggacagtggctgcagggggatgaccaccagttcaat
ctaatggccaatggcaccctgtacatcaccagtatgcaggagatggatatgggtttctac
agctgtgtggccaagaattccataggagaggccatatggagtggctggcttaggaagcga
gaagattggggagcatcaccagatcctcctacagaactgagtaccctgccaggccctccc
tctcagccagtggtcactgagatcaccaagaacagcattaccctgacctggaagcccaat
ccacaggctggggctacagtcacctcttatgtgatagaggccttcagccaagcagctggc
aacacatggcggacagtggcagatggtgtgcagctggagacacatacagtcagcggtctg
cagcccaataccatctacctgttcctggttcgagctgtgggaacctggggcctcagtgaa
cccagccctgtctctgagcctgtccgcacccaggacagtcatccaaccaggccagtggag
gatccatggagaggccaacggggaatggctgaagtggctgtgcgaatgcaggagcccata
gtcctagggccccggactctgcaggtgtcctggactgtggatggcccggtccagctggta
caaggtttccgggtatcctggagggcagcaggccctaatgggggaagctggacagtgctg
gatctacagaccccaagccagcaaagtactgtgctaagaggactcccaccagggacccaa
atccagattaaggtgcaagcccaaggccaggaggggctgggggctgaaagcccctttgtg
accaggaacattcctgaggaggctcccagtggtcccccccagggagtggcagtagccttg
gggggtgatggcaacagcagtatcactgtgtcctgggagcctccactgccctctcaacaa
aatggggtcatcactgaataccagatctggtgcctgggcaatgatagtcgtttccacctc
aaccggtctgtggcgggctgggcacgttccgtgatgctgcggggactcctgccgggtctg
ctctaccataccctggtcgcggcggccaccagcgctggcgtgggcgtgaccagtgccccg
gtgctagtgcagctaccgtccccgccgggagtggagcctgggctcgaggtgggcccgggg
ctggcggagcggctggcgagggtgctgcgggatcctgccttccttgcaggcagcggtgcg
gcctgcggggcgttgctgctcgggctctgcgccgccctctaccggcgccggaagcagcgc
aaagagctcagccactacacggcctcctttgcctacacacccgcagtgtccttcccacac
tcagagggactctctggagccagttccaggccacccataggccttggccctgcctcctac
ccatggctggcagactcgtggccccacccttctcgaagcccttcagcccaggaacctagg
ggaagctgctgccccagcaatcctgacccagatgacagatactataatgaagcaggaatc
tccctatatttggctcagactgcccggggcactgctgcccctggtgagggtcctgtctat
agcaccattgacccagcaggggaagagctgcagaccttccatgggggattcccccaacaa
ccatcaggggacccaggcacctggagccagtatgctcctccagaatggagccaaggggac
agtggagccaggggaggcaaagtgaagcttctggggaaacctgtgcagatgccctctctg
aactggccagaagccttgccaccacctcccccttcctgtgaactgagctgtccagagggg
cctgaggaggatctggagggcagctcagagtcagaagaatggtgcccaccaatgcctgag
agaagccacccgattgagcccagctccagtggagggtgcctggttgctccaccccaaggg
gaaaacccctctcccacaccctcctatggacagcagtccacagccactcttaccccctca
cctcctgaccctccccagccccctagtgatcttccccatctccatcagatgcccaggagg
gtgccccttgggccaagttcccctctcagtgtgtcccagcccactctgagtagctatgaa
gggaagcctgctggcctgagtgctggcctcacatcctcccaccatctcggccccagccct
gtccccagtacaaccagcagtgccccaggaagaacccggcaggtacctggagagatgact
cctccacttcaaggaccaggtgcccgaatccggaagaaatccaaggctcttcattataag
agggaacacagccctggggacttgcccccaccacccctgccaccgccagaagaggaggta
agctgggccttggggctgagagcagcaggcagcatgtcctccttggagcgagagcacagt
ggggagaggagagttgtgcaggtggtgcctctgggggcccagcggggaccccatccagat
gaagaggcctggctcccatatggcagaccaagcttcctgtcccgtggccaggccaccagc
aactgttccactgctggcagcaactcttccaggggttctggcagctctcggggctctcgg
ggtcctggacggagcaggagccggagccggagccacagccagagccaaaggccaggacag
aaacgtcgagaggaaccaagatga
DBGET
integrated database retrieval system
