Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101965093
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Entry
101965093 CDS
T10664
Symbol
Ltbr
Name
(RefSeq) tumor necrosis factor receptor superfamily member 3 isoform X1
KO
K03159
lymphotoxin beta receptor TNFR superfamily member 3
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04060
Cytokine-cytokine receptor interaction
iti04061
Viral protein interaction with cytokine and cytokine receptor
iti04064
NF-kappa B signaling pathway
iti04066
HIF-1 signaling pathway
iti04672
Intestinal immune network for IgA production
iti05166
Human T-cell leukemia virus 1 infection
iti05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
101965093 (Ltbr)
04066 HIF-1 signaling pathway
101965093 (Ltbr)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
101965093 (Ltbr)
04061 Viral protein interaction with cytokine and cytokine receptor
101965093 (Ltbr)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
101965093 (Ltbr)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
101965093 (Ltbr)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
101965093 (Ltbr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
iti04050
]
101965093 (Ltbr)
Cytokine receptors [BR:
iti04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
101965093 (Ltbr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Motif
Other DBs
NCBI-GeneID:
101965093
NCBI-ProteinID:
XP_005338415
UniProt:
I3MKS6
LinkDB
All DBs
Position
Unknown
AA seq
435 aa
AA seq
DB search
MRLPWAVFPCGLAWGSLLLGLCGLLVTSQPQLERPYRSENQTCRDQEKEYYEPKHQLCCS
RCPPGKYVTAECNHSQNTLCAMCAENSYNEHWNHLTICQMCRPCDPVLGFKEVAPCTSKR
KTECRCQPGMFCAQRAPECVFCNLLSECPPGTEVELKDEIREDDNNCIPCKAGHFQNTSS
RYAHCQPHTRCEDQGLVEEAPGTPESDTICRKPPEPLPPEMPETMLVLAILLPLVSFLLL
TTVLACTWKSHPSLCRKLGSLLKTHPEVMGEAEKTARRGGGDEGEESPSCPPPKANPHFP
DLVEPLLPNPGDLSPAPGGPPPTPALEEVVLQQQSPLIQTRELEAESGEQGHVAHGANGI
HVTGGSVTVTGNIYIYNGPVLGGTRGPGDPTAPPEPPYPIPEEGAPVSSELSTPYQEDGK
AWHLAETETMGCHAL
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgccctgggcggtctttccctgcggcctggcctgggggtcactcctgctgggc
ctctgcgggctcctagtgacatcccagccccagctggagcgcccatacagatcggagaac
caaacctgcagggaccaggaaaaggagtactacgagcccaagcatcagctctgctgctcc
cgctgccccccaggcaagtatgtcacagctgaatgcaaccacagccagaacacactttgt
gccatgtgcgctgaaaactcctacaatgagcactggaaccacctcaccatctgccagatg
tgccgtccctgtgacccagtgctgggcttcaaggaggttgcgccttgcaccagcaaacgc
aaaactgagtgccgctgccagccaggaatgttctgtgcccaacgagcccctgagtgtgtg
ttttgtaatctactttcagagtgcccgcccggcactgaagtcgagcttaaagatgaaatc
agggaggatgacaacaactgtatcccctgtaaggcaggacacttccagaacacttcctct
cgatacgcccactgccaaccccacaccaggtgtgaggaccaaggccttgtggaagaagct
ccaggcacccccgaatctgacacaatctgcagaaaaccaccagagccactgcctcctgag
atgccagaaaccatgctggtgctggccatcctgctgccattggtctcctttctgctcctc
accactgtcctcgcctgcacctggaagagccatccctctctctgcaggaaactgggatcc
ctgctcaagacgcatccagaggtaatgggggaggctgagaagacagcaagaaggggcgga
ggtgatgagggggaggaatccccttcgtgtcctcctccgaaagccaacccacatttccct
gacctggtagagccacttctgcccaaccctggagacttgtccccagcccctggcgggccc
ccaccaactccagctttggaggaagtggtgctacaacagcagagccctctgatccagacc
agggagttggaggctgagtctggggagcaaggccatgtggcccacggtgccaatggtatt
catgtcaccggtggctctgtgactgtcactggcaacatctacatctataatggtccagta
ctggggggaacacggggtcctggagaccccacagctccccctgagcctccataccccatt
cctgaagagggtgcccctgtatcttctgagctctctacaccctaccaagaagatggaaaa
gcttggcatctggctgagacagagacaatgggttgccatgccctctaa
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