KEGG   Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101965097
Entry
101965097         CDS       T10664                                 
Symbol
Irf9
Name
(RefSeq) interferon regulatory factor 9 isoform X1
  KO
K04693  interferon regulatory factor 9
Organism
iti  Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04217  Necroptosis
iti04380  Osteoclast differentiation
iti04620  Toll-like receptor signaling pathway
iti04621  NOD-like receptor signaling pathway
iti04625  C-type lectin receptor signaling pathway
iti04630  JAK-STAT signaling pathway
iti05160  Hepatitis C
iti05162  Measles
iti05164  Influenza A
iti05165  Human papillomavirus infection
iti05167  Kaposi sarcoma-associated herpesvirus infection
iti05168  Herpes simplex virus 1 infection
iti05169  Epstein-Barr virus infection
iti05171  Coronavirus disease - COVID-19
iti05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:iti00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04630 JAK-STAT signaling pathway
    101965097 (Irf9)
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    101965097 (Irf9)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    101965097 (Irf9)
   04621 NOD-like receptor signaling pathway
    101965097 (Irf9)
   04625 C-type lectin receptor signaling pathway
    101965097 (Irf9)
  09158 Development and regeneration
   04380 Osteoclast differentiation
    101965097 (Irf9)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    101965097 (Irf9)
  09172 Infectious disease: viral
   05160 Hepatitis C
    101965097 (Irf9)
   05171 Coronavirus disease - COVID-19
    101965097 (Irf9)
   05164 Influenza A
    101965097 (Irf9)
   05162 Measles
    101965097 (Irf9)
   05168 Herpes simplex virus 1 infection
    101965097 (Irf9)
   05167 Kaposi sarcoma-associated herpesvirus infection
    101965097 (Irf9)
   05169 Epstein-Barr virus infection
    101965097 (Irf9)
   05165 Human papillomavirus infection
    101965097 (Irf9)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:iti03000]
    101965097 (Irf9)
Transcription factors [BR:iti03000]
 Eukaryotic type
  Helix-turn-helix
   Tryptophan clusters interferon-regulating factors
    101965097 (Irf9)
SSDB
Motif
Pfam: IRF-3 IRF CoV_nucleocap
Other DBs
NCBI-GeneID: 101965097
NCBI-ProteinID: XP_013219932
LinkDB
Position
Unknown
AA seq 435 aa
MCNTTIQRKWPHWGSSNITQRRMATGRARSTRKLRNWVVEQVESGNFPGVCWDDTNKTMF
RIPWKHAGKQDFREDQDAAFFKAWAIFKGKSKEGDIGGPAVWKTRLRCALNKSPEFEEVP
ERGCMDVAEPYKVYRLLPPGTLPAHPETQKSPSKRCHSSVSSEREEEEDTSNNCTLSPNY
LQDPLNNEVRTNGEASHSDSRSSSSSSSSSRNNSPESQEGVDTTEATVQEDQVSMEHLPP
LNSDYSLLLTFIYSGRVVGKAQVHSLDCRLVAEFSDSRSSMEQVVFPKPDPSEPIQRLLS
QIERGILVASNSRGLFVQRLCPIPISWNAPQAPPGPGPHLLPSNKCVELFRTTYFCRDLD
RYSQGLGPLPKFQVALHFWERSSDPNNTSQNLITVQMEQAFARHLLEKRSRQPLLSCCSL
GDPPAASPLYSSFLL
NT seq 1308 nt   +upstreamnt  +downstreamnt
atgtgcaacacaacgatccagaggaaatggcctcactggggaagcagcaacatcacacag
agaaggatggcaacaggcagggcacgttctacgcgaaagctccggaattgggtggtagag
caagtggagagtgggaatttcccgggagtgtgctgggatgacacaaataagaccatgttc
cggattccctggaagcacgcaggcaagcaggactttcgggaggaccaggatgctgccttc
ttcaaggcctgggctatatttaagggaaagtccaaggagggcgacataggaggccctgct
gtctggaagactcgcctgcgctgtgccctcaacaagagtccagaatttgaagaagttcct
gagagaggctgtatggatgttgctgaaccctacaaggtatatcggctgctgccaccaggc
actctccctgcccacccagagacccagaaatcaccatcaaagagatgccacagttccgtg
tcctctgagagggaggaggaggaggatacctcgaacaattgcacactcagtcccaactat
ctccaggaccccctcaataatgaggtaaggactaatggggaagcaagccactcagacagt
agaagcagtagcagtagcagcagcagcagcagaaacaacagccctgagtcacaggaaggt
gtggataccactgaggctactgttcaagaggatcaggtatccatggagcatctcccccct
ctgaactcagactactcgctgctgctcaccttcatctacagtggacgtgtggtaggtaaa
gcccaggtgcacagcctggactgccgccttgttgctgagttctcagactccaggagcagc
atggaacaggttgtatttcccaagcctgacccatcagagcccatccagcgcctcctgagc
cagattgagagaggcatcttggtggccagtaactccagaggtctctttgtacaacgcctt
tgccccatccccatctcctggaatgcacctcaggccccacctgggccaggcccgcatttg
ctacccagcaataagtgtgtggagctcttcaggaccacctatttctgcagagatttggac
aggtactcccagggcctgggccccctacccaagttccaggtagcactgcatttctgggag
aggagctctgaccccaacaatacctcacagaatcttatcacagtgcaaatggagcaggcc
tttgcccgacatttactggagaagaggagcaggcagccacttttatcctgctgtagtcta
ggggacccacctgctgcctcacctctctattcctcctttctcctttga

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