KEGG   Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101965283
Entry
101965283         CDS       T10664                                 
Symbol
Polr2d
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
iti  Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03020  RNA polymerase
iti03420  Nucleotide excision repair
iti05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:iti00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    101965283 (Polr2d)
  09124 Replication and repair
   03420 Nucleotide excision repair
    101965283 (Polr2d)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    101965283 (Polr2d)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:iti03021]
    101965283 (Polr2d)
   03400 DNA repair and recombination proteins [BR:iti03400]
    101965283 (Polr2d)
Transcription machinery [BR:iti03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     101965283 (Polr2d)
DNA repair and recombination proteins [BR:iti03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      101965283 (Polr2d)
SSDB
Motif
Pfam: RNA_pol_Rpb4 Tfb4 Maelstrom
Other DBs
NCBI-GeneID: 101965283
NCBI-ProteinID: XP_005315923
UniProt: I3N6B3
LinkDB
Position
Unknown
AA seq 142 aa
MAAGGSDPRAGDVEEDASQLIFPKEFETAETLLNSEVHMLLEHRKQQNESAEDEQELSGV
FMKTLNYTSRFSHFKNRETIASVRSLLLQKKLHKFELACLANLCPETAEESKALIPSLEG
RFEDEELQQILDDIQTKRSFQY
NT seq 429 nt   +upstreamnt  +downstreamnt
atggcggccggcggcagtgatccacgggctggtgatgtggaagaggacgcctcacagctt
atctttcccaaagagtttgaaacagcagagactcttctaaattcagaagttcatatgctt
ctggagcatcgaaagcaacaaaatgagagtgcagaggatgagcaggaactctcaggagtc
ttcatgaaaactttaaactacacttcccgtttcagtcatttcaaaaatagagagaccatt
gcaagtgtccgtagcttgctgctccagaaaaagctacataagtttgagttggcttgtttg
gccaacctttgcccagagactgctgaagagtccaaggctctgattccaagcctggagggg
cgatttgaagatgaggaactgcagcagattcttgatgatatccagacaaagcgcagtttc
cagtattaa

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