Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101965432
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Entry
101965432 CDS
T10664
Symbol
Robo1
Name
(RefSeq) roundabout homolog 1
KO
K06753
roundabout, axon guidance receptor 1
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04360
Axon guidance
iti04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
101965432 (Robo1)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
101965432 (Robo1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
iti04515
]
101965432 (Robo1)
Cell adhesion molecules [BR:
iti04515
]
Immunoglobulin superfamily
ROBO family
101965432 (Robo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_PDGFR_d4
Unc5_NetrinR_N
Big_4
DUF7908
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
101965432
NCBI-ProteinID:
XP_040143132
LinkDB
All DBs
Position
Unknown
AA seq
1637 aa
AA seq
DB search
MKWKHLPFLVIISLLSVSKHHLFLAQLIPDPEDLERGNDHGTPIPTSDNDDNSLGYTGSR
LRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRM
LLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHNASLEVAILRDDFRQNPSDVM
VAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAGKYVC
VGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPVPTVRWRKDDG
DLPKSRYEIRDDHTLKIRKVMAGDMGSYTCVAENMVGKAEASATLTVQEPPHFVVKPRDQ
VVALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDLTITNVQR
SDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPVIRQGPVNQTVAVDGTLVLSCVATG
SPVPTILWRKDGILVSTQDSRIKQLETGVLQIRYAKLGDTGRYTCIASTPSGEATWSAYI
EVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNTVTLSWQPNLNSGATPTSYIIEAFS
HASGSSWQTVAENVKTETFAIKGLKPSAIYLFLVRAANAYGISDPSQISDPVKTQDVPPT
SQGVDHKQVQRELGNVVLHLHNPTILSSSSIEVHWTVDQQSQYIQGYKILYRPSGANHGE
SEWLVFEVRTPTKNSVVIPDLRKGVNYEIKARPFFNEFQGADSEIKFAKTLEEAPSAPPQ
SVTVSKNDGNGTSILVSWQPPPEDTQNGMVQEYKVWCLGNETRYHINKTVDGSTFSVVIP
SLVPGIRYSVEVAASTGAGPGVKSEPQFIQLDSHGNPVSPEDQVSLAQQISDVVKQPAFI
AGIGAACWIILMVFSIWLYRHRKKRNGLTSTYAGIRKVPSFTFTPTVTYQRGGEAVSSGG
RPGLLNISEPAAQPWLADTWPNTGNSHNDCSINCCTAGNGNSDSNLTTYSRPADCIANYN
NQLDNKQTNLMLPESTVYGDVDLSNKINEMKTFNSPNLKDGRFVNPSGQPTPYATTQLIQ
SNLTNNMNNGSGDSSEKHWKPPGQQKQEVAPIQYNIMEQNKLNKDYRANDTVPPTIPYNQ
SYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKVPKQGGMNWADLLPPPPAHPPPHGNSE
EYSISVDESYDQEMPCPVPPARMYLQQDELEEEEDERGPTPPVRGAASSPAAVSYSHQST
ATLTPSPQEELQPMLQDCPEEIGHMQHPPDRRRQPASPPPPPRPISPPHTYGYISGPLVS
DMDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTPASSVGDLESSVTGSMINGWGSASEE
DNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMQDAGGRRHFHASQCPRP
TSPVSTDSNMSAAVMQKARPAKKQKHQPGHLRREAYTDDLSPLSLSCFPRPVMVPKLPSA
ETRTDRSSDRKGGNYKGREVLDGRQVADLRTNPGDPREAQEQQNDGKGRGNKAAKRDLPP
AKTHLIQEDILPYCRPTFPTSNNPRDPSSSSSMSSRGSGSRQREQANVGRRNIAEMQVLG
GYERGEDNNEELEETES
NT seq
4914 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggaaacatcttccttttttggtcataatatcactcctcagcgtgtcaaaacat
catctgtttctggctcagcttattccagaccctgaagacctagagagggggaacgaccac
gggacgccaatccccacctctgataacgatgacaattcgctgggctacacaggctcccgt
cttcgacaggaagattttccacctcgcattgttgaacacccttctgacctaattgtctca
aaaggagaacctgcaactctgaactgtaaagctgaaggccgtcccacacccactattgaa
tggtacaaaggcggggagagagtggaaacagacaaagatgaccctcgctcacaccgaatg
ttgctgccaagtggatctttatttttcttacgtatagtacatggaagaaaaagtaggcct
gacgaaggggtctacgtgtgtgtggcaaggaattaccttggagaggctgtgagccacaac
gcatcgctggaggtggctatactacgggatgacttcagacaaaacccctccgatgttatg
gtggcagtaggggagcctgctgtcatggaatgccagcctccacgaggccatccggagccc
accatctcctggaagaaggatggctctccactggatgacaaagatgaaagaataactata
cgaggaggaaagctaatgattacttacacccgtaaaagtgatgctggcaaatatgtttgt
gttgggaccaatatggtcggggaacgtgagagtgaagtagcagagctcactgttttagag
agaccatcctttgtgaagagacctagtaacttggcagtgaccgtggatgacagtgcagaa
tttaagtgtgaggcccgaggagaccctgtgcctacagtccgatggaggaaagatgatgga
gacttgcccaaatccagatatgaaatccgagatgatcataccttgaaaattcggaaggtc
atggctggtgacatgggatcatatacttgtgttgcagaaaatatggtcggaaaagctgaa
gcatcagccactctgactgttcaagaacctccacattttgttgtgaaacctcgtgaccag
gttgtcgccttaggacgaactgtcacttttcagtgtgaagcaacaggaaaccctcaacca
gctattttttggaggagagaagggagtcagaatctgcttttctcataccagccaccacaa
tcatccagccggttttctgtctctcagactggtgacctcactattactaatgttcagaga
tctgatgttggttattatatctgccagactttgaatgttgctggaagtatcatcacgaaa
gcatatttggaagttactgatgtgattgcagaccggcctcccccagtcattcgacaaggt
cctgtgaatcagaccgtagctgtggatggtactttagtcctcagctgtgtggccacaggc
agtccagtgcccacaattctgtggagaaaggatggaatccttgtttcaacccaagattcc
cgaatcaaacagctggagacaggagtgttgcagatccgatatgcaaagctgggtgacact
ggtcggtacacctgcattgcatcgacccccagtggtgaggccacgtggagtgcttacatt
gaagtccaagaatttggagttccagttcaacctccgagacctactgacccaaatttaatc
cctagtgccccttcaaaacctgaagtcacagatgtcagcagaaacacagtcactttatca
tggcaaccaaatttgaattcaggagcaactccaacatcttatattatagaagccttcagc
catgcatctggtagcagctggcagaccgtagcagagaatgtgaaaacagaaacatttgcc
attaaaggactcaaacctagtgcaatttaccttttccttgtgagggcagctaacgcttat
ggaattagtgatccaagccaaatatcagacccggtgaaaacacaagatgttccaccgacg
agtcagggggtggaccacaagcaggtccagagagaactgggaaacgtcgtcctgcacctc
cacaatcccaccatcctttcttcctcatcaattgaagtgcactggacagtggaccaacaa
tctcagtatattcaaggatacaaaattctctatcggccatctggagccaaccatggtgaa
tcggagtggttagtttttgaagtgagaactccaaccaaaaatagtgtggttatccctgat
ctcagaaagggagtcaactatgaaattaaggctcgccctttttttaatgaatttcaagga
gcagatagcgaaatcaagtttgccaaaaccttagaagaagcaccaagtgccccaccccaa
agtgtaactgtatcaaagaatgatggaaatggaacatcaattcttgtcagctggcagcca
cctccagaagacactcaaaatggaatggttcaagaatataaggtttggtgtctgggcaat
gaaacccgataccatataaacaagacagtagatggttctaccttttctgtggttattccc
tccctggttcccgggatccggtacagtgtggaagtggcagccagcactggcgctggacct
ggggtgaaaagtgagcctcaattcatccagttagattctcatgggaaccctgtgtcacct
gaggaccaggtcagccttgctcagcagatttcagacgtggtgaagcagccagcgttcatc
gcaggaatcggagcagcctgctggatcatcctcatggtcttcagcatctggctctaccga
cacaggaagaagaggaacggacttactagtacttatgcgggtatcaggaaagtcccgtcc
tttaccttcacgccaacagtaacttatcagagaggaggcgaagctgtgagcagtggaggg
aggccaggacttctcaacatcagtgaacctgctgcacagccgtggctggcagacacgtgg
cctaatactggcaacagccacaatgactgctccatcaactgctgcaccgcgggcaatgga
aacagcgacagcaacctgaccacctacagccgcccagctgattgtatagcaaattataac
aaccaactggataacaaacaaacaaatctgatgctccctgagtcaactgtttatggtgat
gtggatcttagtaacaaaatcaatgagatgaaaaccttcaatagcccaaatctgaaggac
gggcgttttgtcaatccatcagggcagcccactccttatgccaccacccagctcatccag
tccaacctcaccaataacatgaacaatggcagcggggactccagcgagaagcactggaaa
ccacccggtcagcagaaacaagaagtggcaccaattcagtataacatcatggagcaaaac
aaactgaacaaagattatcgagcaaatgacacagttcctccaacgattccgtacaatcaa
tcatatgaccagaatacgggaggatcctacaacagttcggatcggggcagtagtacatct
ggaagtcaagggcacaagaaaggggcacggacacccaaggttcccaaacagggtggcatg
aactgggcagacctgcttcctcctcccccggcacatcctcctccccatggcaacagtgaa
gagtacagtatttctgtagatgaaagctatgatcaagaaatgccatgtcctgtaccacca
gcacggatgtatttgcagcaggatgaattagaagaggaggaagatgaaagaggccccaca
cctcctgtgcggggagcagcttcttctccagctgctgtgtcctatagccatcagtccact
gccactctgaccccgtccccacaggaagaactccagcccatgttgcaggattgcccagag
gagattggccatatgcaacacccacccgacaggcgaaggcagccagcgagtcctcctccg
cctccgcggccgatttctcccccgcacacctatggctacatttcaggacccctggtctca
gatatggatacggatgcgccagaagaggaagaagatgaagccgacatggaagttgccaaa
atgcaaactagaaggcttttattgcgtgggcttgagcagacccctgcctcaagcgttggg
gacctggagagctctgtcactgggtccatgatcaacggctggggttcagcctcagaggag
gacaacatctccagtgggcgttccagtgttagttcttccgatggctcctttttcactgat
gctgattttgcccaggcagtggcagcagctgcagagtatgctggtctgaaagtggcgcga
aggcagatgcaggatgctggtggtcgccgacattttcatgcatctcagtgcccaaggccc
acaagtcctgtgtctacagacagcaacatgagtgctgcagtcatgcagaaagccagacca
gccaagaaacaaaaacaccagccaggacatctgcgcagagaagcctacacggatgatctt
tcacctctttcattaagttgtttcccaagacctgtaatggtgccaaaactcccttctgct
gaaaccagaacagacagatcgtcagatcgaaaaggaggcaattacaaggggagagaagta
ttggacggaaggcaggttgctgacctgcgaacaaacccgggtgatcccagagaagcacag
gaacagcaaaatgatgggaaaggaagaggaaacaaggcagcaaagcgagaccttccacca
gcaaagactcatctcatccaagaggatattctaccttactgtagacctacttttccaaca
tcgaataatcccagagatcccagttcctcaagctcaatgtcatcaagaggatcaggaagc
agacaaagagaacaagcaaatgtaggtcgaagaaatattgcagaaatgcaagtacttgga
ggatatgaaagaggagaagataataatgaagaattagaggaaactgaaagctga
DBGET
integrated database retrieval system
