Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101965665
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Entry
101965665 CDS
T10664
Symbol
Atg4d
Name
(RefSeq) cysteine protease ATG4D isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04136
Autophagy - other
iti04140
Autophagy - animal
iti04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
101965665 (Atg4d)
04140 Autophagy - animal
101965665 (Atg4d)
04136 Autophagy - other
101965665 (Atg4d)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
iti01002
]
101965665 (Atg4d)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iti04131
]
101965665 (Atg4d)
03029 Mitochondrial biogenesis [BR:
iti03029
]
101965665 (Atg4d)
Peptidases and inhibitors [BR:
iti01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
101965665 (Atg4d)
Membrane trafficking [BR:
iti04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
101965665 (Atg4d)
Mitochondrial biogenesis [BR:
iti03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
101965665 (Atg4d)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
101965665
NCBI-ProteinID:
XP_005336189
UniProt:
I3MW53
LinkDB
All DBs
Position
Unknown
AA seq
474 aa
AA seq
DB search
MNSVSPAAAQYRSGSPEDARRPEGRRPRVPRVPDPNGLGPSGASGPTLASPGAAPVEPDE
VDKFKAKFLTAWNNVKYGWAVKSRTSFSKISSIHLCGRRYRFEGEGDIQRFQRDFMSRLW
LTYRRDFPPLAGGCLTSDCGWGCMLRSGQMMLAQGLLLHFLPRDWRWAEGTGLLPPELSG
VASPSRYRGPARWMSPHWAQGTPELEQERRHRQIVSWFADHPQAPFGLHRLVELGQSSGK
KAGDWYGPSLVAHILRKAVESCSEVTRLVVYVSQDCTVYKADVARLMARSDPTAEWKSVV
ILVPVRLGGETLNPVYVPCVKELLRSELCLGIMGGKPRHSLYFIGYQDDFLLYLDPHYCQ
PTVDVSQADFPLESFHCTSPRKMAFAKMDPSCTVGFYAGDRKEFEKLCSELTRVLSSSSA
TERYPMFTLAEGHAQDHSLDDLCSQLSQPATLRPPRTGRLLKAKRPSSEDFVFL
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaactcggtgtcgccggccgccgcgcagtaccggagcgggagcccggaggacgcgcgc
cggcccgagggccgcaggccgagggttcctcgagtcccggaccccaacggcctggggccc
tccggagccagcggtcccactcttgcctctcctggagctgccccagttgagccggacgaa
gtggacaagttcaaggccaagtttctgactgcctggaacaacgtcaaatatggttgggcg
gttaaaagccggaccagctttagcaagatctccagcattcacctctgtggccgccgctac
cgttttgagggtgaaggtgacatccaacgtttccagcgagactttatgtcacgcctgtgg
ctcacttaccgaagggactttccacccctggcggggggctgcctgacctccgattgtggc
tggggatgcatgttgcgcagtggccagatgatgctggcccagggcctgctactgcatttc
ctccccagagactggagatgggccgagggcacaggcttgcttccccctgagctgtcaggg
gtggcctctcccagccggtaccgtgggcctgcccgctggatgtcccctcactgggctcag
ggcacccctgagctggaacaggaacgtcggcaccggcagattgtgtcctggtttgctgac
cacccccaggcccctttcggtctacatcggctggtggagctgggacagagctcaggcaag
aaggcgggtgactggtatgggccatcgctggtggcacacatcctcaggaaagctgtggag
agctgctcagaggtcacccgcctggtagtgtatgtttctcaggactgcacagtttataag
gcggacgtggcacgcctgatggccaggtcggaccctacagctgagtggaagtctgtggtc
atcctggtgcctgtgcgactgggtggtgagacgctcaacccagtgtacgtgccctgcgta
aaggagctactgcggtcagaactgtgcttaggcatcatggggggcaagccacgacactca
ctgtacttcatcggctaccaggatgacttcctgctctacctggacccccactactgccag
ccaacagtggatgtcagccaggctgattttcccctggagtctttccattgtacctcaccc
cgcaagatggccttcgccaagatggaccctagctgtaccgtggggttctatgctggagac
aggaaggagtttgagaagctctgctcggagctgaccagggttctcagctcctcttcagcc
acagaacggtaccccatgttcaccctggcggagggccacgctcaggaccacagcctggat
gacctctgctcccagctttcccagccagccactctgcgcccccctcgcacagggcgcctc
ctcaaggccaaaaggccaagctccgaggactttgtgtttttataa
DBGET
integrated database retrieval system
