Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101965679
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Entry
101965679 CDS
T10664
Symbol
Sfpq
Name
(RefSeq) splicing factor, proline- and glutamine-rich
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
iti01009
]
101965679 (Sfpq)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
iti03021
]
101965679 (Sfpq)
03041 Spliceosome [BR:
iti03041
]
101965679 (Sfpq)
Protein phosphatases and associated proteins [BR:
iti01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101965679 (Sfpq)
Transcription machinery [BR:
iti03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
101965679 (Sfpq)
Spliceosome [BR:
iti03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
101965679 (Sfpq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
Motif
Other DBs
NCBI-GeneID:
101965679
NCBI-ProteinID:
XP_040145101
LinkDB
All DBs
Position
Unknown
AA seq
526 aa
AA seq
DB search
MSRDRFRSRGGGGGGFHRRGGGGGRGGLHDFRSPPPGMGLNQNRGPMGPGPAPHRGGGEP
RGGRQHHPPYHQQHHQGPPPGGPGGRSEEKISDSEGFKANLSLLRRPGEKTYTQRCRLFV
GNLPADITEDEFKRLFAKYGEPGEVFINKGKGFGFIKLESRALAEIAKAELDDTPMRGRQ
LRVRFATHAAALSVRNLSPYVSNELLEEAFSQFGPIERAVVIVDDRGRSTGKGIVEFASK
PAARKAFERCSEGVFLLTTTPRPVIVEPLEQLDDEDGLPEKLAQKNPMYQKERETPPRFA
QHGTFEYEYSQRWKSLDEMEKQQREQVEKNMKDAKDKLESEMEDAYHEHQANLLRQDLMR
RQEELRRMEELHNQEMQKRKEMQLRQEEERRRREEEMMIRQREMEEQMRRQREESYSRMG
YMDPRERDMRMGGGGAMNMGDPYGSGGQKFPPLGGGGGIGYEANPGVPPATMSGSMMGSD
MRTERFGQGGAGPVGGQGPRGMGPGTPAGYGRGREEYEGPNKKPRF
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgggatcggttccgaagtcgcggcggtggcggtggcggtttccaccgtcgcgga
ggaggcggtggtcgtggcggtctccacgatttccgctctccgccgcccggcatgggcctc
aatcagaaccgcggccccatgggcccaggcccagcgccgcaccgaggaggcggggagccc
cgtgggggccgccagcaccacccgccctaccaccagcagcaccaccagggtcccccgccc
ggcgggcccggcggccgcagcgaggagaagatctccgactcggaggggtttaaagctaac
ttgtctctcttgaggaggcctggagagaaaacctacacacagcgttgtcggttgtttgtt
gggaatctccccgctgatatcacagaggatgaattcaaaagactatttgcaaaatacgga
gaaccaggagaagtttttatcaataaaggcaaaggattcggatttattaaacttgaatct
agagccttggctgaaattgccaaagctgaacttgatgatacacccatgagaggtagacag
cttcgggttcgctttgccacacatgctgctgccctctctgttcgtaatctttcaccttat
gtttccaatgaactgttggaagaagcctttagccagtttggtcctattgaaagggctgtt
gtaattgtggatgatcgtggtagatctacagggaaaggcattgttgaatttgcttctaaa
ccagcagcaagaaaagcatttgaacgatgcagtgaaggtgttttcctactgacaacaact
cctcgtccagtcattgtggaaccacttgaacaattagatgatgaagatggtcttcctgaa
aaacttgcgcagaagaatccaatgtatcaaaaggagagagaaacgccacctcgctttgct
cagcatggcacatttgagtatgaatattctcagaggtggaagtccttggatgaaatggaa
aaacagcaaagggaacaagttgaaaaaaacatgaaggatgcaaaagacaagttggaaagt
gaaatggaagatgcctatcatgagcatcaggcaaatcttttgcgccaagatctgatgaga
cgccaggaagaattaagacgaatggaagaacttcacaatcaagaaatgcagaaacgtaaa
gaaatgcagttgaggcaagaggaggaacgacgtagaagggaggaagagatgatgattcgc
caacgtgagatggaagaacaaatgagacgccaaagagaagaaagttatagccggatgggc
tacatggatccaagagaaagagacatgagaatgggtggtggaggagcaatgaacatggga
gatccctatggttcaggaggccagaaatttccacctctaggtggtggtggtggcataggt
tatgaagctaatcctggagttccaccagcaactatgagtggttccatgatgggaagcgac
atgcgtactgagcgctttgggcagggaggtgcggggcctgtgggtggacagggtcctaga
ggaatgggccctggaactccagcaggatatggtagagggagagaagagtatgaaggccca
aacaaaaaaccccgattttag
DBGET
integrated database retrieval system
