Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101965721
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Entry
101965721 CDS
T10664
Name
(RefSeq) protocadherin beta-17-like isoform X1
KO
K16494
protocadherin beta
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
Cell adhesion molecules [BR:
iti04515
]
Cadherins
Protocadherins
101965721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
101965721
NCBI-ProteinID:
XP_005324319
LinkDB
All DBs
Position
Unknown
AA seq
796 aa
AA seq
DB search
MESPLPKAPQKRQVTIIIFLFLLWEVGSVTVKYSILEETDSGSFVSNLENDLGLGIGELA
KRGAQILSQGNKQHLELEQKSGNLLLKEKLDREELCGDTDPCILHFQVLVKNPVQFIQGE
LLLQDVNDHAPEFLGKEILLKIAESSQPGTLFPLEIAQDLDVGSNTVQNYIISSNSYFHL
LTRNHSDGRKYPELVLEKALDREEQPEFRLTLTALDGGSPPRTGTCQVLILVLDINDNAP
EFAQGLYQVQIPENSPVGSLVIIVTARDLDAGIYGELTYSFFQSPNQVIQAFEINKASGE
IRLKKLLDFEEIDSYHIEIEASDGGGLSGKCTVVIEVMDVNDNAPEVTMSLLINDIPENS
PETVVAIFRISDPDSKDNGKMMCSIQDHLPFILKPTVENFYTLVTEGALDRETRAQYNIV
ITVTDLGTPRLKTKHNITVLVSDVNDNAPAFTQTSYTLLVRENNQPALHIGTISATDRDS
GTNAQITYSLLPNQDPHLPLASLVSINADNGQLFALRALDFEALQEFEFHVGATDQGSPA
LSSQALVRVVVLDDNDNSPFVLYPMQNASAPCTELVPRAAEQGYLVTKVVAVDGDSGQNA
WLSYQLLKATEPGLFGVWAHNGEVRTARLLSERDAARHRLVVLVKDNGEPPLSASVTLHV
LLVDGFSQPYLPLPEVAPERAQGDSLTVYLVIALASVSSLFLFSVLVFVVVRLCRRRRAA
PLGVCSMPEGHFPGHLVDVSGTGTLSQNYGYEVYLAGSSETSEFQVLKPMLPNLLGEGAD
KNTEENRNLRNHFGFN
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggagtctccgctccccaaagcgcctcagaaaaggcaagtgaccatcattattttcttg
tttctactatgggaggtgggcagtgtaaccgttaagtattccattctagaagaaacagac
agtggttcttttgtgtccaacctagaaaacgatctagggctgggcataggggagctggcc
aagaggggggcccagattctttcccaagggaacaaacagcacttagagcttgaacaaaag
agtgggaatttgctcctaaaagaaaaattggatcgagaggagttgtgcggggacacggat
ccatgtatactgcatttccaggtgttagtgaaaaacccggtgcagtttattcaaggtgaa
ctactcctccaagatgtaaatgaccatgccccagaattcttgggaaaggaaatcctcctt
aaaatcgcggaaagcagccaaccagggactctgtttcctttggaaatagctcaagatttg
gacgttggtagcaacacagttcagaactacataattagcagcaactcctattttcacctt
ctcactcgcaatcacagcgacggcaggaaatatcctgagctggtgctggaaaaagccctg
gaccgagaggagcaacccgagttcaggttaaccctcacagctctggatggtgggtctccg
cccagaactggaacttgccaggttctcatcctggttctggacatcaatgacaatgcccct
gaatttgctcaaggactctaccaggtgcagatcccagagaacagccctgtaggttccctt
gtcataatcgtcaccgctagagatttagatgctgggatctatggggagctcacctactca
tttttccaatccccaaatcaagtcattcaggcctttgaaataaataaagcctcaggagaa
attagattaaaaaaactgttggattttgaagaaattgactcttaccacatagaaattgag
gcctcagatggtggaggtctttcaggaaaatgcactgtcgtcatagaagtgatggatgta
aatgacaacgcccctgaagtgactatgtcattacttatcaatgatatcccagaaaattcc
ccagaaactgtagttgctattttcagaatttcagatccagactctaaagacaacggaaaa
atgatgtgttccattcaagaccatctaccctttattctgaaacccacagtagaaaacttc
tacactttggtcacagaaggagcactggacagagaaaccagagcccagtacaacatcgtc
atcaccgtcaccgacttggggacacccaggctgaaaaccaagcacaacataaccgtcctt
gtctccgacgtcaacgacaacgcccctgccttcacacaaacatcatacacactgttggtg
cgcgagaacaaccagcccgctctgcacataggcaccatcagtgccacagacagagactca
ggcaccaacgcgcagatcacctactcgctgctgccaaaccaggacccgcacctgcctcta
gcctcgctggtctccatcaacgcagacaatgggcagctgttcgcgctgagggcgctggac
ttcgaggccctgcaggaattcgagttccacgtgggcgccacagaccaaggctcgcccgcg
ctcagcagccaggcgctggtgcgagtggtggtgctggacgacaatgacaactcgcccttc
gtgctgtatccaatgcagaacgcctctgcgccctgcaccgagctggtgcccagggcggca
gagcagggctacctggtcaccaaggtggtggcagtggatggagactcgggccagaatgcc
tggctgtcataccagctgctcaaggccacggagccagggctgtttggcgtgtgggcgcac
aatggcgaggtgcgcacagccaggctgctgagcgagcgcgacgcggccaggcacaggctg
gtggtgctggtcaaggacaatggcgagcctccgctgtctgccagtgtcacgctgcacgtg
ctgctggtggatggcttctcccagccctacctgccgcttccggaagtggcgcccgagcgc
gcgcagggggactcgctcactgtctacttggtcatcgccttggcttcggtgtcatcgctc
ttcctcttctctgtgctggtgttcgtggttgtgaggctgtgcaggaggcgcagggcggcg
cctctgggtgtctgctctatgcctgagggccactttcctggccacctggtggatgtcagt
ggcaccgggaccctgtctcagaattatggatatgaagtttacctggcgggaagttctgag
actagtgagttccaagttcttaaaccaatgctccccaacttactgggtgaaggggctgat
aagaataccgaagaaaaccgtaacttgaggaatcattttgggttcaattag
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