Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101965728
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Entry
101965728 CDS
T10664
Symbol
Vcl
Name
(RefSeq) vinculin isoform X1
KO
K05700
vinculin
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04510
Focal adhesion
iti04520
Adherens junction
iti04670
Leukocyte transendothelial migration
iti04810
Regulation of actin cytoskeleton
iti04820
Cytoskeleton in muscle cells
iti05100
Bacterial invasion of epithelial cells
iti05146
Amoebiasis
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101965728 (Vcl)
04520 Adherens junction
101965728 (Vcl)
09142 Cell motility
04820 Cytoskeleton in muscle cells
101965728 (Vcl)
04810 Regulation of actin cytoskeleton
101965728 (Vcl)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
101965728 (Vcl)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
101965728 (Vcl)
09174 Infectious disease: parasitic
05146 Amoebiasis
101965728 (Vcl)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
iti04812
]
101965728 (Vcl)
04147 Exosome [BR:
iti04147
]
101965728 (Vcl)
Cytoskeleton proteins [BR:
iti04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
101965728 (Vcl)
Exosome [BR:
iti04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101965728 (Vcl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
VMAP-M0
Motif
Other DBs
NCBI-GeneID:
101965728
NCBI-ProteinID:
XP_005325950
UniProt:
A0A287D3A9
LinkDB
All DBs
Position
Unknown
AA seq
1134 aa
AA seq
DB search
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE
TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAE
INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPSASPGDAGEQAIR
QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGL
DVLTAKVENAARKLEAMTNSKQSIAKKIDAAQNWLADPNGGPEGEEQIRGALAEARKIAE
LCDDPKERDDILRSLGEISALTSKLADLRRQGKGDSPEARALAKQVATALQNLQTKTNRA
VANSRPAKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD
LLAKCDRVDQLTAQLADLAARGEGESPQARALASQLQDSLKDLKARMQEAMTQEVSDVFS
DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLGATAEKAAAVGTANKSTVEG
IQASVKTARELTPQVISAARILLRNPGNQAACEHFETMKNQWIDNVEKMTGLVDEAIDTK
SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQEP
DFPPPPPDLEQLRLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVINQPMMM
AARQLHDEARKWSSKPGIPAAEVGIGVVAEADAVDAVGFSVPSDMEDDYEPELLLMPSNQ
PVNQPILAAAQSLHREATKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAK
DIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNIS
DEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgtttcatacacgcacgattgagagcattctggagccggtggcgcagcagatc
tcgcacctggtgattatgcacgaggagggcgaggtggacggcaaagccatccctgacctc
accgcgcccgtggccgccgtgcaagcggccgtcagcaacctcgtccgggttggaaaagag
actgttcaaactaccgaggatcagatattgaagagagatatgccacccgcatttattaag
gttgagaatgcttgcaccaagcttgtccaagcagcccagatgcttcagtccgacccttac
tcagtgcctgctcgagattatctaattgatgggtcaaggggcatcctctctggcacatca
gatctactccttaccttcgatgaggctgaggttcgtaaaattatccgagtttgcaaagga
attttggaatatcttacagtggcagaggtcgtggagactatggaagatttggtcacttat
acaaagaatcttgggccaggaatgactaagatggccaagatgattgatgagagacagcag
gagttgactcaccaggagcaccgagtaatgttggtgaactcaatgaacactgtgaaagag
ttgcttccagttctcatttcagctatgaagatttttgtaacaactaaaaattcaaaaaac
caaggaatagaagaagctttgaaaaatcgcaattttactgtggaaaagatgagtgctgaa
attaatgagatcatccgtgtattacaactcacttcttgggatgaagatgcctgggccagc
aaagacactgaagccatgaagagagcattggcctccatagactccaaactgaatcaggcc
aaaggttggctccgtgaccccagtgcctccccaggggatgctggtgaacaggccatcagg
cagatcttagatgaagctggaaaagttggtgaactttgtgcaggcaaggaacgcagggag
atcctgggaacctgcaaaatgctagggcagatgactgatcaagtggctgacctccgagct
agaggtcaaggagcttcaccagtggccatgcagaaagcccagcaggtatctcaaggtcta
gatgtgctcacagcaaaggtggagaatgcagctcgaaagttggaagccatgacaaactca
aagcagagcatagcaaagaagattgatgctgctcagaattggcttgcagatccaaatggt
ggacctgaaggagaagaacagatccgaggggctttggctgaagctcggaaaatagcagaa
ttgtgtgatgatcctaaagagagagatgacattcttcgttcccttggagaaatatctgct
ctgacttctaaattagcagatttacgaaggcaggggaaaggagattccccagaggctcga
gcattggccaaacaggtggccacggcccttcagaacctgcagaccaaaaccaacagggct
gtggcaaacagcagacctgccaaagcagctgtccaccttgagggcaaaattgagcaagca
cagcgatggattgataatcctacagtggatgaccggggagtcggtcaggctgctatccgg
gggcttgtggctgaaggacatcgtctggctaatgtcatgatggggccttatcgtcaagat
cttcttgccaagtgtgaccgtgtggaccagttgacagctcagctggctgacctggctgcc
agaggggaaggggaaagtcctcaggccagagcacttgcatcacagctccaagactcctta
aaggatctgaaagccaggatgcaggaggctatgactcaggaggtgtcagatgttttcagt
gataccacaactcctatcaagctattggcagtggcggctactgcccctcctgatgcaccc
aatagggaagaggtatttgatgagagggcagcaaactttgaaaaccattcaggaaggctt
ggagctacagcagagaaggcggctgctgttggtactgctaataaatcaacagtggaaggc
attcaggcatcagtgaagactgctcgagaactcacaccccaggtcatctcagctgctcgc
atcttactgaggaaccctggaaatcaagccgcttgtgaacattttgaaaccatgaagaac
cagtggattgataatgttgaaaaaatgacagggctggtggacgaagccattgataccaaa
tctctgttggatgcttctgaagaagcaattaaaaaagatctggacaagtgtaaggtagcc
atggccaacattcagcctcagatgctggttgctggggcaacaagcattgctcgtcgggcc
aaccgaatcctgctggtggcgaagagggaggtggagaactctgaggatcccaagttccgt
gaggctgtgaaagctgcctctgatgaattgagcaaaacaatctcccctatggtgatggat
gcaaaggctgtggctggaaacatttctgaccctggcctgcaaaagagcttcctggactct
ggatatcggatcctgggagctgtggccaaggtcagagaagccttccaacctcaggaacct
gacttcccacctcctccacctgaccttgaacagctccgactaacagatgagcttgctcct
cccaaaccacctctgcctgagggtgaggtccctccacccaggcccccaccaccagaggaa
aaggatgaagagtttcctgagcagaaagccggggaggtgattaatcagccaatgatgatg
gctgccaggcagctccatgatgaagctcgaaaatggtccagcaagccgggtatcccagct
gctgaggtgggtataggagttgtagctgaggcagatgcggttgatgctgttgggttctct
gtcccctctgacatggaagacgattacgaacctgagctactgttaatgccatccaatcag
cctgtcaaccagcccattctggccgcggctcagtccttgcatcgggaagctaccaagtgg
tctagtaagggcaatgatatcattgcagcagccaagcgcatggctctgctgatggctgag
atgtctcggctggtaagagggggcagtggtaccaagcgggcactcattcagtgtgccaag
gacattgccaaggcctcagatgaagtgactcggttggccaaggaagttgccaagcagtgc
acagataagcggattagaaccaacctcttacaggtatgtgagcgaatcccaactataagc
acccagctcaaaatcctgtctactgtaaaggccaccatgctgggccggaccaacatcagt
gacgaggaatctgagcaggccacagagatgctagttcacaatgcccagaacctcatgcag
tccgtgaaggagactgtaagagaagcagaagctgcttcaatcaaaattcgaacagatgct
ggatttacactgcgctgggtcagaaagactccctggtaccagtag
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integrated database retrieval system
