Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101965818
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Entry
101965818 CDS
T10664
Symbol
Trim21
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM21
KO
K10651
tripartite motif-containing protein 21 [EC:
2.3.2.27
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti05322
Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09160 Human Diseases
09163 Immune disease
05322 Systemic lupus erythematosus
101965818 (Trim21)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
iti03019
]
101965818 (Trim21)
04131 Membrane trafficking [BR:
iti04131
]
101965818 (Trim21)
04121 Ubiquitin system [BR:
iti04121
]
101965818 (Trim21)
Enzymes [BR:
iti01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101965818 (Trim21)
Messenger RNA biogenesis [BR:
iti03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101965818 (Trim21)
Membrane trafficking [BR:
iti04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
101965818 (Trim21)
Ubiquitin system [BR:
iti04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
101965818 (Trim21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-C3HC4
zf-B_box
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_2
zf-RING_6
zf-RING_5
zf-RING_4
U-box
RING_XB3-XBAT31
zf-Nse
Sina_RING
zf-rbx1
zf-RING_10
zf-C3HC4_5
zf-RING_11
Baculo_IE-1
zf-UDP
Motif
Other DBs
NCBI-GeneID:
101965818
NCBI-ProteinID:
XP_005323371
UniProt:
I3M569
LinkDB
All DBs
Position
Unknown
AA seq
477 aa
AA seq
DB search
MASAIPLEMMWEEVTCAICLDPMVDPVNIECGHSFCQECISQVGKDGGSVCPVCRQHFML
RHLRPNRQLANMVENLRRIGQDAKKETQGARCAVHGEKLHLFCEKDGQALCWVCAQSKKH
RDHTMVPIEEAAQEYQEKLQKALEKLRRKQELTEKLEVDLAMKRADWKRQIETHKSRIHA
EFMQQKIFLDEEEQRQMQKLEKDEMEQLRILGETEAELARQSQTLQELISELEWKSRGSA
LELLQEVKVVLERSESWNLKKLDIDSPDLRSICHVPGLKKMLRSYGVYITLDQDTANPWL
ILSEDRRQVRLGNTRQDVPENEERFDNYPIVLSAQSFNSGKHYWEVDVTGKEAWDLGVCR
NSVRRKGQFLVDTENGFWTIWLWNKKYEAGTCPQTPLHLQVPPCQVGIFLNYEDGIISFY
NITDHGSLIYTFSECAFTEPLRPFFNPGFNNGGGNSGPLALCPLKTGWSKSGVPSQP
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagcaatacccctggaaatgatgtgggaagaggtcacatgcgctatctgcctc
gatcccatggtggatcctgtgaacatcgaatgtggccacagcttctgccaagaatgcatc
tctcaggttgggaaagatggaggcagtgtctgtcctgtgtgccggcagcactttatgctc
aggcacctcagacccaaccggcagctagccaacatggtggaaaaccttcgacgaataggc
caggatgccaagaaagagacacagggagcacgctgtgctgtgcatggagagaaacttcac
ctgttctgtgagaaagatgggcaggccctttgctgggtgtgtgcccaatccaagaaacac
cgtgaccacaccatggtccctattgaggaggctgctcaggaataccaggagaagctccaa
aaggcattagagaaactgagaaggaagcaggagttgacagagaagttggaagtggatctt
gcaatgaagagagcagactggaagaggcagattgagacacacaaatcaaggattcatgca
gagtttatgcagcagaaaatcttcctggatgaagaagaacagaggcagatgcagaagctg
gagaaggatgagatggaacaacttagaatcctgggagagacggaagctgaactggcccgg
caaagccagaccctgcaagagctgatctcggagctggagtggaagagtcggggctcagca
ctggagctcctgcaggaggtgaaagttgtcctggaaaggagtgagtcctggaacctgaag
aagctggacattgactccccagacctaagaagtatctgtcatgtgccaggactaaagaaa
atgctgaggagctatggagtatacatcactctggatcaagacacagccaatccatggctc
atcctttcagaggacaggagacaagtgagacttggaaacacccgacaggatgtaccagaa
aatgaagagagatttgataattaccctatagtcctcagtgcccagagcttcaactctgga
aaacactactgggaggtagatgtgacgggaaaggaggcctgggacctgggggtctgcaga
aactctgtacggaggaaggggcaatttttggtcgatactgagaatggtttctggacaatt
tggttgtggaacaaaaagtatgaggctggcacttgtccccagactcccctccatcttcag
gtgcctccgtgccaagttgggatttttttgaattatgaggatggcatcatctccttctat
aacatcactgatcatggctccctcatctacaccttctctgaatgtgccttcacggaaccc
ctgcggcccttcttcaaccctggtttcaataatggaggaggaaattcaggccctctggcc
ctctgcccgctgaaaacgggatggtcaaaatcgggtgtcccttctcagccatga
DBGET
integrated database retrieval system
