Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101966010
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Entry
101966010 CDS
T10664
Symbol
Ppp1r42
Name
(RefSeq) protein phosphatase 1 regulatory subunit 42 isoform X1
KO
K17579
protein phosphatase 1 regulatory subunit 42
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
iti01009
]
101966010 (Ppp1r42)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
iti04812
]
101966010 (Ppp1r42)
Protein phosphatases and associated proteins [BR:
iti01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101966010 (Ppp1r42)
Cytoskeleton proteins [BR:
iti04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
101966010 (Ppp1r42)
Microtubules
Tubulin-binding proteins
101966010 (Ppp1r42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_9
LRR_8
LRR_14
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
101966010
NCBI-ProteinID:
XP_005323050
LinkDB
All DBs
Position
Unknown
AA seq
335 aa
AA seq
DB search
MVRLTLELIAKNSNLKPRKEETIAQCLKKLTHINFSDKNIDAIEDLSFCKNLSVLYLYDN
RISEITNLNYATNLTHLYLQNNCISYIENLRSLKKLEKLYLGGNYIAVIEGLEGLEELRE
LHVESQKLPLGEKLLFDPRTLRSLAKSLSILNISNNNIDDIRDLEILENLYHLTAVDNQI
IHIKDLEFLLNKLVKLCKMDLNGNPVCIKPKYRDRIILVSKSLEFLDGKEIKNVERQFLV
NWKASKEARKISKKRNSKNECEINSYISNFETMHHIVPVYYPQVGKPKLVFFSDSQRFLL
NGNTSPESCQEDNTKIIEDMGNLSLKESETLLTKK
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggttcgactgaccttggaactaattgcgaaaaacagcaatcttaaaccccgaaaagaa
gaaaccattgcacaatgcctgaagaaattaactcatataaatttttcagacaaaaatata
gatgcaattgaagacctgtctttttgcaaaaatcttagcgttttatatttatatgataat
cgtattagtgaaatcactaacctgaattatgccacaaatctgacccatctataccttcaa
aacaattgtatttcatatatagagaacctcagatcattaaagaaactggaaaaactatac
ctgggaggcaattacattgctgtcatagaaggtttggaaggattggaagaactaagagaa
cttcatgttgagagtcagaagcttccccttggagaaaagcttctatttgatccaagaact
cttcgttctctggcaaaatccctctccatactgaatatcagcaacaataatattgatgac
ataagagacttagaaatactggagaatctttatcacctcacagcagtggacaaccaaatt
atacatataaaggatttggagtttttactgaataagctggtgaaattatgtaaaatggat
ctaaatggaaatcctgtttgtatcaaaccaaaatacagggacagaataatattggtgtcc
aaatcattggaatttcttgatggaaaggaaataaaaaatgtggaaagacaattcctagta
aattggaaagcatccaaagaagctagaaaaatcagcaagaaaaggaacagtaaaaatgag
tgtgaaatcaactcttatataagtaactttgaaacaatgcatcacatagttcctgtttat
tacccacaggtgggtaagccaaaattagtctttttctccgactcacagagatttctttta
aatggaaatacatctccagaaagctgccaagaagataacactaaaattattgaagatatg
gggaatctctctttgaaggaatctgaaaccttgctaacaaaaaaatga
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