Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101966132
Help
Entry
101966132 CDS
T10664
Symbol
Clec16a
Name
(RefSeq) protein CLEC16A isoform X4
KO
K19513
protein CLEC16A
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iti04131
]
101966132 (Clec16a)
03029 Mitochondrial biogenesis [BR:
iti03029
]
101966132 (Clec16a)
Membrane trafficking [BR:
iti04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
101966132 (Clec16a)
Mitochondrial biogenesis [BR:
iti03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
101966132 (Clec16a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLEC16A_C
FPL
Flu_NS2
DUF6136
Drc1-Sld2
Motif
Other DBs
NCBI-GeneID:
101966132
NCBI-ProteinID:
XP_005327239
LinkDB
All DBs
Position
Unknown
AA seq
1034 aa
AA seq
DB search
MFGRSRSWVGGGHGKSSRNIHSLDHLKYLYHVLTKNTTVTEQNRNLLVETIRSITEILIW
GDQNDSSVFDFFLEKNMFVFFLNILRQKSGRYVCVQLLQTLNILFENISHETSLYYLLSN
NYVNSIIVHKFDFSDEEIMAYYISFLKTLSLKLNNHTVHFFYNEHTNDFALYTEAIKFFN
HPESMVRIAVRTITLNVYKVDNQAMLHYIRDKTAVPYFSNLVWFIGSHVIELDTCVQTDE
EHRNRGKLSDLVAEHLDHLHYLNDILIINCEFLNDVLSDHLLNRLFLPLYVSSLESPDKG
GERPKISLPVSLYLLSQVFLIIHHAPLVNSLAEVILNGELSEVYAKTEQDVQRNSAKPSI
RCFIKPTESLERSLEMNKHKGKRRVQKRPNYKNVGEEEDEEKGAAEDAQEDAEKAKEIEM
VIMERKLSELAASSSLQEQNTTDEEKSAAATCSAGVQWSRPFLDMVFHALDSPDDDYHAL
FVLCLLYAMSHNKGIDPEKLERIQLPVPNEAEKTTYNHLLTERLIRIMNNAAQPDGKIRL
ATLELSCLLLKQQVLAASGCIMKDVHLACLQGAREESVHLARHFYKGEDIFLDMFEDEYR
SMTMKPMNVEYLMMDASILLPPTGTPLTGIDFVKRLPCGDVEKTRRAIRVFFMLRSLSLQ
LRGEPETQLPLTREEDLIKTDDVLDLNNSDLIACTVITKDGGMVQRFLAVDIYQMSLVEP
DVSRLGWGVVKFAGLLQDMQVTGEYDDSRALNITIHKPTSSPHSKPFPILQATFVFSDHI
RCIIAKQRLAVGRIQARRMKMQRIAALLDLPIQPRTEVLGFGLGSSASTQHLPFRFYDQC
RRGSSDPTVQRSVFASVDKVPGFAVAQCINQHSSPSLSSPSPPSASGSPSGSGNTSHCDS
GGSSSTPSAAQSPTDVPTTPEQPPPPPHLPDQLGTGREAEADAKPSRSLARGPELETAHL
SPSLLPAQQPTISLLYEDTADTLSVEAPTLVPPVDPHSLRALTGRPQPPTPATAGTETPD
EEAAWAEPEGPAEH
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgtttggccgctcgcggagctgggtgggcgggggccacggcaagtcctcccgcaacatc
cactccttggaccacctcaagtatctataccacgttttgactaagaacaccacagtcaca
gagcagaaccggaacctgctggtggagaccatccgttctatcaccgagatcctgatttgg
ggagatcagaatgacagctctgtatttgacttcttcctggagaagaacatgtttgttttc
ttcttgaacatcctgaggcagaaatcgggccgctatgtgtgcgttcagctgctgcagact
ttgaacatcctctttgagaatatcagtcacgagacttcactttattacctgctgtccaat
aactatgtgaactccatcatcgtccacaagttcgacttttctgacgaggagatcatggcg
tattacatatcgttcctgaaaacgctctcgctcaagctcaacaaccacactgtccacttc
ttttacaacgagcataccaatgactttgccctgtacacagaagccatcaagttttttaat
catcccgaaagcatggttcgaattgctgtgaggaccatcaccctgaatgtctacaaagtg
gacaaccaggccatgctgcactacatcagggacaagaccgccgtcccctacttctccaac
ctggtctggttcatcgggagccacgtgatcgaactcgacacctgcgtgcagactgatgag
gagcacaggaatcggggcaagctgagcgacctggtggccgagcacctggaccacctgcac
tatctcaatgacatactgatcatcaactgtgagttcctcaatgacgtgctcagcgaccac
ctgctcaacaggctcttcctgcccctgtatgtgtcctccctggagagccccgacaaggga
ggagaacgaccgaaaatcagcctgcctgtgtctctctatctcctgtcacaggtcttcctg
atcatacatcacgcaccgctggtgaactccttagctgaggtcattctgaatggcgagctg
tctgaggtgtatgccaagactgagcaggacgttcagaggaattctgccaagcccagcatt
cggtgcttcattaaacccactgagtccctggagcggtcccttgagatgaacaagcacaag
ggcaagaggcgggtgcaaaagagacccaactacaaaaacgttggggaggaggaagacgag
gagaagggggccgccgaggatgcccaggaagacgccgagaaggctaaagagatcgagatg
gtgatcatggagcgcaagctctcggagctggccgccagctcctccctgcaggagcagaac
accaccgacgaggagaagagcgctgcggccacgtgctctgcgggcgtgcagtggagcaga
cccttcctggatatggtcttccacgccctggacagcccggacgacgactaccatgccctc
ttcgtgctctgcctcctgtacgccatgtctcataacaaaggcatagatcctgaaaaacta
gagcgaatccagctgccggtgccaaatgaagctgagaagaccacctataaccacctgctg
accgaaagactcatcaggatcatgaacaatgctgcccagccagatgggaagatccggctg
gcgacgctggagctgagctgcctgctcctgaagcagcaggtcctggctgcctcaggctgc
atcatgaaggacgtgcacctggcctgcctgcagggtgcaagagaagagagtgtccacctc
gcaagacatttttacaagggagaagacatttttttggacatgtttgaagatgagtataga
agcatgacgatgaagcccatgaatgtggagtacctcatgatggacgcctccatcctgctg
cccccgacaggcaccccgctgacaggcatcgactttgtgaagcgactgccgtgtggggac
gtggagaagacaaggagggccatccgggtgttcttcatgctgcgctccctgtcgctgcag
ctgcgaggggagccggagacccagctgccgctgactcgggaggaggacctgatcaagacc
gacgatgtcctggacctgaataacagtgacttgatcgcgtgcacagtgatcaccaaggac
ggtggcatggtccagcgattcctggctgtggacatttaccagatgagtttggtggagcct
gatgtgtcccggctcggctggggagtggtcaagttcgcaggccttctgcaggacatgcag
gtgaccggcgagtacgacgacagccgcgccctgaacatcaccatccacaagcccacctcc
agcccccactccaagcccttccccatcctccaggccaccttcgtcttctcggaccacatc
cgctgcatcatcgccaagcagcgcctggccgtggggcgcatccaggccaggcgcatgaag
atgcagaggatagccgccctcctggacctcccgatccagccaagaaccgaagtcctgggg
tttggactgggctcctccgcctccacccagcacctgcctttccgcttctatgaccagtgt
cgcaggggcagcagcgaccccaccgtgcagcgctctgtgtttgcatctgtggacaaggtg
ccgggcttcgccgtggcccagtgcataaaccagcacagctcgccctccctgtcatcgccg
tcaccaccgtctgccagtgggagccccagcggcagcgggaacaccagccactgtgactcg
gggggctcctcctccaccccctcagcagcccagagcccgacagatgtccccaccactcca
gagcagcctccgcctccgcctcaccttcccgaccagctggggaccggcagggaagcggaa
gcagacgccaagcccagcaggagcctggcccggggcccggagctggagaccgcacacctg
tcccccagcctgctgcccgcccagcagcccaccatctccctgctctacgaggacactgcc
gacactctgagcgtcgaggctccgaccctggtcccgcctgttgacccccacagcctccgt
gcccttactggcaggccccagccgcccacgccagccaccgcgggcaccgagacccccgac
gaggaggctgcgtgggcagagcccgaggggcccgccgagcactga
DBGET
integrated database retrieval system
