Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101966189
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Entry
101966189 CDS
T10664
Symbol
Cdh5
Name
(RefSeq) cadherin-5
KO
K06533
cadherin 5, type 2, VE-cadherin
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04514
Cell adhesion molecules
iti04520
Adherens junction
iti04670
Leukocyte transendothelial migration
iti05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
101966189 (Cdh5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
101966189 (Cdh5)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
101966189 (Cdh5)
09160 Human Diseases
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
101966189 (Cdh5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
iti04515
]
101966189 (Cdh5)
04090 CD molecules [BR:
iti04090
]
101966189 (Cdh5)
Cell adhesion molecules [BR:
iti04515
]
Cadherins
Major cadherins
101966189 (Cdh5)
CD molecules [BR:
iti04090
]
Proteins
101966189 (Cdh5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_2
Cadherin_3
Stevor
Motif
Other DBs
NCBI-GeneID:
101966189
NCBI-ProteinID:
XP_005318316
UniProt:
I3M7K0
LinkDB
All DBs
Position
Unknown
AA seq
784 aa
AA seq
DB search
MQRLTMLVAALGAYLGLLVTAAVAGSNPTQPDTPGILPIHQRQKRAWIWNQMHIEEEKNS
SLPHHVGKIKSSVNRKNTKYVLQGDSAGKVFRVDAETGDVYAFERLDREKVTEYQLTALI
VDKETNKNLEPPSSFTIKVHDVNDNWPVFTHRLFNASVPEMSAVGTSVTRVTAVDADDPT
VSDHATITYQVLKGEEYFAIDNSGLIFTTIKNLDREKQARYEIVVEARDAQGLHGESGTA
TVLITLQDVNDNFPIFTQSKYTFTVPEDIRVGSPLGFLSVHDPDEPQNRMTKYSIVQGEY
RDTFTIETDPTRNEGIIKPMKPLDYELIRQYVFTIEATDPTINLRYLSGISVSNKARVII
NITDVDEPPVFQQHFYHFQLRENQKKPLIGSVMAVDPDEARRSIGYAIRRTSDKGQFFRI
TKQGHIFNEKEVDRETYPWYNLTVEAKELDSSGVSTGKESIVQVHIEVLDENDNAPMFAQ
PYEPKVCENVAAGKLVVQISAIDKDITPRNVKFKYALSTEDSNFTLTDNHDNTANVTVKY
GQFDRERAKMHYLPILISDNGNPSLTSTNMLSIAVCKCNEWGEFTFCEEAAAQMGVSIQA
LVAIFLCILTITVITLLIFLRRRLRKQARAHGKSVPEIHEQLVTYDEEGGGEMDTTSYDV
SVLNSVRHGGTKPPRPALDAQPAVYTQVQKPPRLAPGGHGGPGEMATMIEVKKDEADQDG
GGPPYDTLHIYGYEGSESIAESLSSLGTDSSDSDIDYDFLNDWGPRFKMLAELYGSDPRE
QLVY
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggctcacgatgctggtggctgctttgggtgcctacctaggcctgctggtgaca
gcagctgtggcaggctctaaccctacccaaccggacactcctggcattctgcctattcac
cagcgtcagaaaagagcctggatttggaaccagatgcacattgaggaagagaaaaactcc
tcattgccccaccatgtgggcaagatcaaatctagcgtgaatcgcaagaacaccaagtat
gtgctccaaggagactccgctggcaaggtcttccgagtcgatgcagagacaggggacgtg
tatgcttttgagagactggaccgggagaaagtcaccgaataccagctcacagccctcatt
gtagacaaggaaaccaacaaaaacctggaacctccttccagcttcactatcaaagttcat
gatgtaaatgacaactggcctgtgttcacgcaccggttgttcaacgcatctgtgcctgag
atgtcagctgtgggaacctcggtcacgcgtgtgacagcagtggatgcagatgaccccacg
gtgtcagaccatgccaccatcacgtaccaagtcctgaagggggaagagtattttgccatc
gataattctggactcattttcaccacaatcaaaaacttggaccgagagaagcaggccagg
tacgagatcgtggtagaggcccgagatgcccagggcctccatggagaatcaggcacagcc
acggtgctaatcactctgcaagacgtcaatgacaacttccccatcttcactcagagcaag
tacacctttacggtgcctgaagacatccgtgtgggcagccctctgggctttctatctgtt
catgacccagacgagcctcagaacaggatgaccaagtacagcatcgtgcagggcgaatac
agggacaccttcaccatcgagacggatcccacccgcaacgagggcatcatcaaacccatg
aagcccctggactatgaactcatcaggcagtacgtgttcaccatcgaggccacggacccc
accatcaacctccggtacctgagtggcatctccgtcagcaacaaagcccgtgtcatcatc
aacatcacagacgtggacgagccccccgtcttccagcaacacttctaccacttccagctg
cgggaaaaccagaagaaacctctgatcggctccgtgatggctgtagatcccgatgaggcc
cggcgcagcattggatacgccatccgcaggaccagtgacaaaggccagttcttccgcata
accaaacaggggcacattttcaatgagaaagaagtggacagagaaacctacccctggtat
aacctgactgtggaggccaaagaactggattctagtggggtctccacaggtaaagaatcc
atcgtgcaggtccacattgaagttttagatgagaatgacaacgctccgatgttcgcccag
ccctatgagcccaaagtgtgtgagaatgtggccgcgggcaagctggttgtgcagatctct
gcaatagacaaggacataactccacggaacgtcaagttcaaatacgccctgagtactgag
gacagcaacttcaccctcacggataatcatgataacacagccaatgtcacagtcaaatat
gggcagtttgaccgggaacgtgccaagatgcattacctgcccatacttatctcggacaat
gggaacccgagcctgaccagcaccaacatgctgtccatagccgtgtgcaagtgcaacgag
tggggagagttcaccttctgtgaggaggcggctgcccagatgggcgtcagcatccaggct
ctagtagccatcttcctctgcatcctcaccatcacagtgatcaccctgctcatcttcctg
cggaggcggctccggaagcaggcccgtgctcacggtaagagcgtgccagagatccacgag
cagctggtcacttacgacgaagagggcggcggcgagatggacaccaccagctatgacgtg
tcagtgctgaactcggtgcgccacggcgggaccaagcccccacggcccgcgctggacgcc
cagccggccgtctacacccaggtgcagaagccaccacggctggctccaggaggacacggc
gggcccggggagatggccaccatgatcgaggtgaagaaggacgaagcggaccaggatggc
ggcgggcccccctacgacacgctgcacatctatggctatgagggctccgagtccatcgcc
gagtcgctcagctccctcggcactgattcctctgactcagatattgattacgacttcctc
aatgactggggtcccaggttcaagatgctggcggagctctacggctccgacccccgcgag
cagctggtgtattag
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integrated database retrieval system
