Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101966335
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Entry
101966335 CDS
T10664
Symbol
Vps36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101966335 (Vps36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iti04131
]
101966335 (Vps36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
iti04147
]
101966335 (Vps36)
Membrane trafficking [BR:
iti04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
101966335 (Vps36)
Exosome [BR:
iti04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101966335 (Vps36)
Exosomal proteins of colorectal cancer cells
101966335 (Vps36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
MA3
Xre-like-HTH
Motif
Other DBs
NCBI-GeneID:
101966335
NCBI-ProteinID:
XP_013216206
LinkDB
All DBs
Position
Unknown
AA seq
328 aa
AA seq
DB search
MAIPLSHIVFIEEQAAGIGKSAKIVVHLHPAPPTKEPGPFQSSKNSYIKLSFKEHGQIEF
YRRLSEEMTQRRWENMPVSQSIQTNRGPQPGRVRAVGIVGIERKLEEKRKETDKNISEAF
EDLSKLMIKAKEMVELSKSIANKIKEKQGDITEDETIRFKSYLLSMGIANPVTRETYGSG
TQYHMQLAKQLAGILQVPLEERGGIMSLTEVYCLVNRARGMELLSPEDLVNACKMLEALK
LPLRLRVFDSGVMVIELQSHKEEEMVAAALETVSEKGSLTSEEFAKLVGMSVLLAKERLL
LAEKMGHLCRDDSVEGLRFYPNLFMTQS
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggccattcctctgtcccacattgtattcattgaggaacaggcagctggaattgggaag
agtgccaaaatagtggttcatctgcacccagctcctcctaccaaagaacctggcccattc
cagagtagtaaaaactcctatatcaaactctccttcaaagagcatggccagattgagttt
tacaggcgtttatcagaggaaatgacacaaagaagatgggagaacatgccagtgtctcag
tcaatacaaacaaatagaggaccccagccaggaagagtaagagctgtaggaattgtaggt
attgaaaggaaactggaagaaaaaagaaaagaaactgacaaaaatatttctgaggccttt
gaagacctcagcaagctaatgatcaaggctaaggaaatggtggagttatcaaaatcaatt
gctaataaaattaaagagaagcagggtgacatcacagaagatgagaccatcaggtttaag
tcctacttgctgagcatgggaatagctaacccagttaccagagaaacctacggctcagga
acacagtaccacatgcagctggccaaacagctggctggaatattgcaggtgcctttagag
gaacgaggcggaataatgtcactcacagaggtgtactgtttagtaaaccgggctcgagga
atggaattgctctcaccagaagatttagtgaatgcatgcaagatgctagaagcactgaaa
ttgcctctcagactccgggtttttgacagtggtgtcatggtaattgagcttcagtcccac
aaggaagaggaaatggtagccgcggccctggagacagtttcagaaaaaggatccctaaca
tcagaagagtttgccaagctcgtgggaatgtctgtcctcctggccaaagaaaggttactg
cttgcagagaagatgggtcatctttgccgagatgactcagtggaaggcttgcggttttac
ccaaatttatttatgacacagagctaa
DBGET
integrated database retrieval system
