KEGG   Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101966341
Entry
101966341         CDS       T10664                                 
Name
(RefSeq) histone-binding protein RBBP4-like
  KO
K10752  histone-binding protein RBBP4
Organism
iti  Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03082  ATP-dependent chromatin remodeling
iti03083  Polycomb repressive complex
iti04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:iti00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    101966341
   03083 Polycomb repressive complex
    101966341
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    101966341
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:iti03036]
    101966341
Chromosome and associated proteins [BR:iti03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     101966341
  Histone modification proteins
   HAT complexes
    HATB complex
     101966341
   HDAC complexes
    Sin3A-HDAC complex
     101966341
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     101966341
    PRC2.2
     101966341
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     101966341
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    101966341
  Chromatin remodeling factors
   NuRD complex
    101966341
   NuRF complex
    101966341
   NuRF complex (fruit fly)
    101966341
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 CAF1C_H4-bd WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 EIF3I WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML WD_LRWD1 WD40_MABP1-WDR62_2nd Beta-prop_DCAF12 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_RIG_1st eIF2A WD40_MABP1-WDR62_1st MIOS_WD40 Beta-prop_DCAF4 Beta-prop_IFT140_1st Beta-prop_SPT8 NBCH_WD40 TAF1C_beta-prop Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 101966341
NCBI-ProteinID: XP_040148283
LinkDB
Position
Unknown
AA seq 425 aa
MADKEAAFDHTVEERVINEEYKIWKKNTPFLYDLLMTHALEWSSLTAQWLPDVTRPEGKD
FSIHPLVLGTSTSDEQNHLVIASVQLPNDDAQFDVSHYDSEKGELGGFGSVSGKIEIEIK
INQEGEVNRAHYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG
YGLSWNPNLSGHLLSALDDHAICLWDISVIPKEGKVVDAKTIFTGHTAEVEDVSWHLLHE
SLFGSVADDQKLMIWNIRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDCRLHVWDLSKIGEEQSPEDAE
DGPPEVLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWKMAENIYNDEDPEGSVDP
EGQGS
NT seq 1278 nt   +upstreamnt  +downstreamnt
atggctgacaaggaagcagcctttgaccacacagtggaagaacgtgtgatcaatgaggag
tacaaaatatggaaaaagaacaccccttttctttacgatttgttgatgacccatgctctg
gagtggtccagcctaacagcacagtggcttccagatgtaaccagaccagaaggaaaagat
ttcagcattcatccacttgtcctggggacatccacatcagatgagcaaaaccaccttgtg
atagccagtgtacagctccctaatgatgatgctcaatttgatgtatcacactacgacagt
gagaaaggagaattaggaggttttggctcagttagtgggaaaattgaaatagaaatcaag
atcaaccaggaaggagaagtaaatagggctcattatatgccccagaacccttgcatcatt
gcaacaaagactccatccagtgatgttcttgtttttgactatacaaaacatccttctaaa
ccagacccttctggagagtgcaacccagatttgcgtctccgtggacatcagaaggaaggg
tatgggctttcttggaacccaaatctcagtgggcacttacttagtgctttagatgaccat
gccatctgcctatgggatatcagtgtcatcccaaaggaaggaaaagtggttgatgcgaag
accatctttacagggcacacagcagaagtagaagatgtttcctggcatctgctccatgag
tccctgtttgggtcagttgctgatgatcagaaacttatgatttggaatattcgttcaaac
aatacttccaaaccaagccactcagtagatgctcacactgctgaagtgaactgcctctct
ttcaatccttatagtgagttcatacttgccacaggatcagctgataagactgttgccttg
tgggatctgagaaatctgaaacttaagttgcattcctttgaatcacataaggatgaaata
tttcaggttcaatggtcacctcacaatgagactattctggcttctagtggtactgattgt
agactgcatgtctgggatttaagtaaaattggagaagaacaatccccagaagatgcagaa
gatggcccaccagaagtattgtttattcatggtggtcacactgccaagatatctgatttc
tcctggaatcccaatgaaccttgggtgatttgttctgtatcagaagacaatatcatgcaa
gtgtggaagatggcagagaacatctataatgatgaagatcctgaaggaagtgtggatcct
gaaggacaaggatcctag

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