Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101966418
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Entry
101966418 CDS
T10664
Symbol
Cfap54
Name
(RefSeq) cilia- and flagella-associated protein 54
KO
K25553
cilia- and flagella-associated protein 54
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
iti03037
]
101966418 (Cfap54)
Cilium and associated proteins [BR:
iti03037
]
Motile cilia and associated proteins
Sperm associated proteins
101966418 (Cfap54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFAP54_N
Motif
Other DBs
NCBI-GeneID:
101966418
NCBI-ProteinID:
XP_040137749
LinkDB
All DBs
Position
Unknown
AA seq
3219 aa
AA seq
DB search
MKKRSTVWIRDGKNSAVILAGSLFQSFFLFSAHTAVPMGNRTNNLQSIIPFWIQFFTPLP
SRGRCVSRNARGMLGGLETVARQPRAYTPQAGRGRVNMAAQGTSSSPLSGTSATSTSPQE
LPSTTPLTSTAISESPRESKASSPSPQPQRASPEDPLPIAAFYGPLDAKNPLLASFEKEI
RELLGFMKKKQVLATTAEEKHEFHRRCATSLFNIWTKYAPRLPDDYYNEKLLKVGDSLCQ
MKEYKLALWQCYGRYLQQFCTNFDEDKADARQFKTVFFPKGFGDKTAALTFHALSAKNIC
NYQLLCDADVNLQNKESVSQCLSILFSLRLIMEVALPQEHLCWIIFNGTIYIYTICRKLM
IVGQSSKALEYLLWASMCMESSVSLLSVRYLTWRATLYTAVCQCYYDCQAGVHGEAFARR
GLAKIDELRQLELMSSSQSQDESKRYFREATIKMAVMIFKRGVFESRRKVKTIFRPKIRL
NLKEAQSLPWPRTITDRLLDEMFDNSASRFLAVLEALSDPNRRILQTGPVVSDEVELRDV
VSELFIAGKELLIISSIGPSGTIGFPNTPLTERTNVISLDAAVKFIKLAFTYEEWGLFES
LAMQLIYFLQRQDDPQSKQAEKDLTLLIAIEPLINLKKNKGLILPLDSYKEGESAQIYLK
HLVSHDSYVRNYGYSEDIFHLAAVLYVCVCNSPQDVQPDKEIVVDMIMFLWQKCKLGIQK
IIMSRNEYKKFTQKIHSNKWFYLLWQINEVIHNYKLEDIDIAVVAEVTLRLSEILEFLGS
PRRKFKKYPDVPLKTEIKIFPGTPKRIMEVLPILKKSPVEQLFFAYELLDKVIGVMNFNC
VLTTLPSGSPVIDHCYVKYAPEVDGNCYKPITANTFIMDLHLELIQAQHRIAVVLLDQLQ
VLQIPTSSKNISAKGSEKQKQSRSDDCFTELTVMNKIKKNKLSKAIYLMQKALVLYEKEE
TCTTSQKFLMEAYSLIEKVEAEQNALYSYQKCLEGLKRKKTRIPPPPLLLSRTHCSVTLK
PTPFISDVKVAWYCILGCKAQGSYGKVRLNNNHLPNSGEVIPADGKSIFEVKGLETNEKY
IFAVAAYSSNGKLVGDAIGETTKPILVYPPLSAVTARMYLTQVAYQVDNYELAKKVFSPV
WDYFVASPLQDEQSSICLRNIMTITQRRLYSDILAETSSILLYLFLRNIFVTSDIKIKEE
NLFCDNIKGSEVFPAQQVARLTECERILVALELSIFLNDSSYVLQAVTQCYGLLAPIIYH
NIVLVPVVQILIKCLVVLQGVLNVVHLKKNISSFESIQHMIACCIYYVIKILRSWKEYDM
AAMVINYGKKMLDITTECRSLFGKNDPEEIPDEGSSKKSVKTKKPQQILLPEKLNEQLTL
LETHLLKLIKQYVAAELSGGEDPIFLYPVVLNWSVKGAVKEVMKFKHRPRFLEFFTQVML
KCLNDEKFSLLLEITIPVLDFLKRRNESLIGQRRIKYRDNFAYKKANVPSKKFKAVVLEI
GRNTDISSRKRNIKKETLRDFYSKNPNILEIPENERNKRPDVRKIAQRYLMIHMNPLILD
YIKRKRFHQIVLEEMPWRAQMNLYLAITCYNLLLQKLGECTKTKPGISHTMVSFRSCDPN
MFSLYNSGTVLPTAKLTLENYKTMLDFLLTAKRRKANLPSDAEEFSTFVNSKASEDNMSK
TQPVYELVSQSALSVREKDRAHLELDSFMRIFLYCRRAMVLAHRGGYWTLLQNCCRAFWN
FTQELQILLKQAVDLYKTFPVSQDTFLCISVLPFYLGAELLIDMLIHLQNIDSVKFIEDK
GEFIVPSCYGNIKHDNGGSSLSFEHPLDDVNVVDLKWIHDFVLKSLEVLYQVEKWETLVS
LAIQFNIISHERYTEQVTPLLVYAQRQLLLRIQKFKGPDITQQACARYEAEYGEKITCRN
FIGKQLKIDPSISKTIDIGDGTNFLQVIIYSEYNRAKQIICVPVDVTDTLRCFRETLEKS
KYHNRSIRHSRKLLSLFLAQTQGDRTGINNLKLTPGKVEFCLGTEEMHMSTPPNLSQEHF
RVFSSVEKSKLPYSQLGLVISSYHQSIDVLHASNQRSLKVQALHTLGNLLIFAEKKRAAF
KCWCQALDDIFRKPDVLHTWKEFVPSSTSAPNSCSPQTFKDYSEEFLSKVGIWGCLQGAV
ISAKIAQFIITLNVNKRISCCIFSALLFQGLLRTTLPHPKAERCYAQYEITQLLPGIELF
SDRHRADICSVVASLYYIIRELHYAKQNLMVVAALVVSVKIRCKGVLSLALRCCIPSRFN
LKSFFSLQIEVLTDLHFFSEAFYELTLIFYGKNMPCPVPSGFKATGKIKLFQSFDSGKPL
TNKENIQALDELINRGSPVVLVMIGQQHLLNKFYMVKAHFLISMAATINSVPENSLKAIY
HGANHGSFERNKPTLSNLKELYIKDDGGSLYQLTKFKDEFTLNMLKTVLLMEAEERLNFL
VSEVEHPGHKDLSHCCAAELEIVVEARLHLAAIALQRHRAAYSAAIVYSTLKLLQDSKLF
KKNVTKDDAEKPLSPGTSTSENKDDEFLDPVSLNAREYFNIHLWLRCRLALVTAFVSQIR
GIGIVKENDMTDCLSLIRELYVEAKSAEDLELQAEFLMQAVILGLQEKHLKADIITDLQD
IIHLLEGKEFLSPRSLLTLAKSLVLLDDLTKAEKFKESPYSKPDKLQFLTQAHNIIIEQM
LTFGETIDLHLSNTEYKNLLQPLKNIYLPHVMLLAKIKMRIGHTLAKQVYNSNKKKDSSK
WLPALHLFDVALRLCKITAMEEYEVEAEILFQKGKIERQIMMEEKSPTLQLESLYEAIQL
SLKNDQNSGLIRDSYLELALWYLYLKKPKRKSSATPLALKLLFRRHSSIKESTIDIIEIY
NSLVWIAIRAAAQVSEAVLAINLLIGKKNARTDEVNQMVLPNIPEFATVDILSSYTDYLL
ASAKPVSGISLPDDTLLTSLYNSELILREKEMHFFLKRHLQLYSSSCIDEFPKELFLGLE
KPHLAERVLYDTIAKIYHDSSLQSIFSSKLLSSTSSVDVTSSEMVVPTVNKELCFQWYIP
PLERPPKEGEPMVLLLCAYNTKLLKSSDIKLSSWGNIFVDSFWIPLNRVISVHEKLSNLA
QIAELSLPATPENTANEDIYKVDETEEKPIGKDIENMILECCSEILALFLSDREPTPLTE
VPFDISLPSIFNLERLFDLANGCIISGGSLFNWIVSIIS
NT seq
9660 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaagaagtacagtctggattcgtgatggtaaaaattcagctgtaatactcgct
ggctctctgttccaaagtttctttctattctcagctcatacagcggtgcccatgggcaac
aggacaaataaccttcagagcatcattcctttctggatccagttctttactcctctgccc
tccaggggccgctgtgtttcccggaatgcgcgcgggatgcttggtggcctcgagaccgtc
gccaggcaaccgcgtgcgtacaccccgcaggccggccggggtcgcgtcaatatggcggcg
cagggcaccagctctagccctctgtcgggcacgtctgccacatccacgtcgccccaagaa
ctgccatcgaccacacccctgacttcgactgcaatttcagagtcgccccgggagtcgaag
gcgagctccccgagcccgcagcctcaacgagccagtcccgaggacccgttgcccatcgcc
gcgttttatgggccgttggacgctaaaaacccgctcctcgcctctttcgagaaggaaatt
cgggagttgttaggctttatgaagaaaaagcaggttttagcgacgacggcggaagagaag
cacgaattccatcggcgttgtgccacctctttgtttaatatctggaccaaatacgccccc
cggctgccagatgactattacaacgaaaagcttctgaaggttggagatagcctttgtcaa
atgaaagaatacaaactggctctttggcagtgctatggaagatatcttcagcagttttgt
accaattttgatgaggataaagcagatgcgagacaattcaaaactgtcttttttccaaaa
ggctttggagataaaactgctgcacttacatttcatgctttgagtgccaaaaatatttgc
aattaccagctgctctgtgatgctgatgtcaacctgcagaataaagaatctgtgagccag
tgtctgtctatcttgttctccttaaggctcatcatggaggtagctctcccacaagagcac
ctttgttggattatcttcaatggcaccatttatatttacaccatttgcaggaaactgatg
atcgtaggtcagtcctccaaggccttggaatacctgctgtgggccagcatgtgtatggag
tcctcggtctcgctcctgtctgtcaggtacttgacatggagagccaccctttacactgct
gtttgccagtgctactatgactgccaagcgggtgtccatggggaggcatttgctcggcgt
ggattagctaaaattgatgagttaaggcaactggaattaatgagttcttcacaatcacag
gatgaatccaaaagatattttagagaggctacgataaagatggcggtgatgatcttcaaa
agaggagtatttgaatctagaagaaaagtcaaaactatctttagaccaaagataagactt
aatctaaaggaagctcagagtttgccgtggccacgtaccatcacagaccggctgttagat
gaaatgtttgataactccgcatcccgctttctggctgtcttggaggctctttctgatcca
aacaggcgaatactacaaactggtcctgttgtatctgatgaagtggaacttcgtgatgtt
gtctcagaactgtttatagctgggaaagaacttttaataatttcaagtattggtccgagt
ggaacgattggttttcccaacacacctcttacggaaagaacaaatgttatttctctggat
gctgctgtaaagtttataaaattagcatttacttatgaagaatggggtttatttgaatct
ttagctatgcagcttatttattttctccagaggcaggatgatccacagtcaaagcaagca
gagaaggatttaactcttctgattgcaatcgaaccactaatcaacctaaagaaaaacaaa
ggtttgatacttcctttggacagttataaagaaggagagtcagctcaaatttatttaaag
catctagtttcacatgattcttatgtgaggaattatggatattcagaagatatttttcat
ttggcagctgtcctgtatgtctgtgtctgtaactctccccaggatgttcagcctgataaa
gaaatagttgtggacatgataatgttcctatggcagaaatgcaaattaggaattcagaag
atcattatgtccagaaacgagtataaaaaattcacccagaaaatccacagtaataagtgg
ttttatcttctgtggcagataaatgaagtgattcacaactataaattggaagacattgac
attgcagtggtggcagaggtcacattacgattaagtgaaatattagagtttttaggaagc
ccaagaagaaaatttaaaaaatatccagatgtacctttaaaaacagagattaagatattc
cctgggactccaaaaagaatcatggaagttcttccaatattaaagaaaagtcctgtggaa
caattgttttttgcttatgaacttcttgacaaagtaattggtgtgatgaattttaattgt
gttttaactactttgccaagtggatcaccagtaattgaccactgctatgtcaagtatgcc
cctgaggttgatggaaattgttacaaaccaatcacagcaaatactttcataatggatttg
catcttgaactaattcaagctcagcacaggatagctgttgtacttctcgaccaattgcaa
gttttgcagattccaacttcgagcaaaaacatttctgccaaaggttcagaaaagcaaaaa
caatccagaagtgatgattgttttacagaattaactgtaatgaataaaataaagaagaac
aaactatccaaagcaatttacttaatgcagaaagctcttgtattatatgagaaagaggaa
acctgtacaacttcacagaaatttttgatggaagcatattctttaattgagaaagttgaa
gcagaacaaaatgccctatattcatatcagaaatgtttggaaggcttaaaaaggaagaag
accaggattcctcctccccctcttctgctatcccgaacacattgttctgtgacactgaaa
cctactccatttatttctgatgttaaggtggcctggtactgcattttgggttgtaaagca
caaggaagctatgggaaagtgaggctcaataacaaccatctcccaaattcaggagaagtg
attccagctgatggtaaaagcatttttgaagtgaaaggtttggaaactaatgaaaaatat
atatttgcggttgctgcttattcttctaatgggaagcttgttggggatgctattggggag
acaactaaaccaattttggtttatccacctctttctgctgttactgctcggatgtatctg
acacaggttgcctatcaggttgataactatgagttggctaagaaagttttctcaccagtt
tgggattattttgttgcctcaccactccaggatgaacaatcctctatttgtttgagaaat
ataatgactattacacagagaagattatattcagatattttggcagagacttcttcaatc
cttttatacctttttcttagaaatatctttgtcacaagtgacattaaaattaaagaagaa
aatcttttctgtgataatatcaaaggcagtgaggttttccctgctcagcaagttgctaga
ctgactgaatgtgagagaatattagtggcattggaacttagcatctttttgaatgattcc
agttatgtccttcaagctgtgactcagtgttatggcctccttgctcctataatatatcac
aatattgttttggtacctgttgtacagatcttgataaagtgcttagtggttttgcaagga
gttctgaatgttgtccacttgaagaaaaatatttcgagttttgaaagtatacagcacatg
atagcttgttgtatctactatgtaataaagattctacgttcatggaaggaatatgatatg
gcagcaatggttataaattatggaaaaaagatgttggacatcacaacagagtgcaggtca
ctatttggtaagaatgatccagaagaaataccagatgagggttcgtctaagaaatctgta
aaaactaagaagccacaacagatattgttgcctgaaaaattaaatgaacaattgaccttg
ttggagacacacctactcaaactgataaaacaatatgttgcggctgaactctcaggagga
gaagaccctatatttctttaccctgtggttttaaattggtcagtgaaaggtgctgtgaaa
gaagttatgaaatttaagcacagacctagattcctggaattttttactcaagttatgctt
aaatgcctgaatgatgaaaaattttcccttttgttggagataacaattcctgtccttgac
ttcttgaaaaggaggaatgaatccctaattggacaaagaagaataaaatatagggacaat
tttgcttataaaaaggcaaatgtaccttcaaagaagtttaaagctgtagtactagagatt
ggaagaaatacagatatatcatcaaggaaaagaaacattaaaaaggaaactctaagagat
ttttattcaaaaaatccaaatattttggaaattccagaaaatgaaagaaataagagaccc
gatgttagaaaaatagcacaacgatacctgatgattcacatgaatccactaatattagat
tatattaaaagaaaaaggtttcatcaaatagttcttgaagagatgccctggagagctcag
atgaacctgtatctggcaatcacatgctacaacctgcttttacaaaagctaggagagtgc
acgaagacgaaacctggcatttcacacacaatggtcagtttccgatcatgtgatcctaat
atgttctcactatataattcaggaacagtattgccaacggcaaaactgactctggaaaat
tataaaacaatgcttgatttcctacttacagctaaaagaagaaaggccaacttaccatca
gatgctgaagaattttctacatttgtgaattccaaagctagtgaagataatatgtctaag
acacaaccagtttatgaattggtctctcaatcagctcttagtgtcagagaaaaggaccga
gcacatttggaactggattcttttatgagaatctttttatattgcaggagagccatggtt
cttgctcatcgtggtggctattggactctgcttcagaactgctgtcgggccttttggaac
tttactcaggagctgcaaatacttcttaaacaggcagtagatctttataaaacatttcct
gttagccaggatactttcctctgtatctcagttttaccattctatttgggagcagaatta
cttattgacatgttaatacatctacaaaatatcgattctgtaaagttcattgaagacaaa
ggagagttcattgttccaagctgttatgggaatattaaacatgataatggtggttctagc
ctttcttttgagcatcctttggatgatgtaaatgtggttgatttgaaatggatccatgac
tttgtattaaaatctctggaagttttatatcaagtggaaaaatgggaaacactagtatcg
cttgccattcaattcaacataatttcacatgagaggtacacagagcaggtgacaccactt
ctggtatatgcacagcgccaattgcttctgagaatacagaagttcaagggcccagatatt
acccagcaagcttgtgcaagatatgaggccgagtatggagagaagattacctgccgaaat
ttcattggaaagcagctcaagattgatccttcaatcagtaagacaatagatataggggat
ggtacaaatttcctacaagtgattatctattcagagtataacagagccaaacagatcatc
tgtgtgcccgtggatgtgacagacactttgagatgctttagagagaccctggaaaaatcc
aaataccataacagatcaatccgacacagcagaaagttgctttcattatttctggcacag
acacaaggagatagaacaggaatcaacaatttaaaactcacgcctgggaaggtggaattt
tgtctgggaacagaagagatgcacatgtcaacacctcctaatctttctcaggagcacttc
agagtttttagttcagtggagaaaagcaaacttccctattcacagctgggattggtaatt
tcttcttatcaccaaagtattgatgttctccatgccagcaatcaaagaagtcttaaagtt
caggcactgcatacacttggaaatcttctcatctttgcagaaaagaaaagggctgctttt
aagtgttggtgtcaagctcttgatgatatattcagaaaaccagatgtgctacatacatgg
aaagaatttgttccctcctccaccagtgcccccaacagttgttcacctcagaccttcaaa
gactacagtgaggaatttctatcaaaagttggcatttgggggtgtcttcaaggtgcagtc
atatccgcaaagatagctcaatttattataaccctgaacgttaacaagagaatcagctgc
tgcattttttctgcattactctttcagggtttgcttcgaaccacacttccacatcctaaa
gctgaacgttgttatgctcagtatgaaatcactcagcttctcccaggcattgaactcttc
tccgatagacacagggctgatatctgctctgtagttgcaagcttgtattacatcatacgt
gaactgcactatgctaagcaaaatctaatggtggtggcagctctggtggtttctgtgaaa
atccgatgtaaaggggtcctgtcgctcgctctgagatgttgtattccatcgagatttaac
ttaaaatcttttttttctttacagatagaagtcctaacagatttgcacttcttttctgag
gccttttatgagttaaccctgatattttatgggaaaaatatgccttgcccagtgccttct
ggttttaaagctactggaaaaattaagttgtttcagtcatttgattcaggaaaacctctt
accaacaaagaaaacatacaggcacttgatgaattaataaatagaggctcgcctgtagtt
ctggttatgattggccaacagcatcttctaaataaattttatatggttaaggcacacttt
ctcataagtatggctgcaacaataaattctgtaccagaaaattcactgaaagctatctac
cacggagctaaccacggtagctttgagaggaacaaaccaactctctctaacttgaaagag
ctatatataaaggatgatggaggctcattgtatcagcttacaaaatttaaagatgaattc
actcttaacatgctaaagacagttttactgatggaagctgaagagaggctaaacttcctt
gtgtccgaggtggaacatccaggccacaaggacctgtctcattgttgtgctgctgagttg
gagattgtggtggaagcccgtcttcatctggcagcaattgccctgcagagacaccgggca
gcatacagtgctgcaatagtatattccacacttaaacttctgcaagattcaaaacttttt
aaaaagaatgtaacgaaagatgatgcagagaagcccctttctccaggcacttctacctca
gaaaataaagatgatgagtttttggaccctgtttccctgaatgctcgagaatatttcaac
attcatctgtggttgaggtgccgcttagcactggtgactgcttttgtctcacaaattcgc
ggcattggaattgtgaaagagaacgatatgacagattgtttgagcctcatccgtgagtta
tacgtggaagcaaaaagtgcagaggacttagaactacaggctgaattcttgatgcaagct
gtaatccttggcctgcaagaaaagcatttaaaggcagacatcatcacagaccttcaggat
ataatacatttgcttgaaggaaaagaatttctttctcctcgatctttgttaactctggcg
aaaagccttgttctactggatgacttaacaaaagctgagaaattcaaggaatctccctat
tcaaaaccagacaagttacaatttttgacccaggctcacaacattattattgaacagatg
ctaacttttggggaaacaattgacttgcatttatcaaacactgaatataaaaatctatta
caacctttgaaaaatatctatcttcctcatgttatgttactggccaaaataaaaatgaga
attggacatacattagccaaacaggtatataacagtaataaaaagaaggactcctccaag
tggttacctgctcttcatctttttgatgttgcactgaggctctgtaagataacggctatg
gaggaatatgaggtagaagctgaaatcctctttcagaaaggcaaaatagaacgtcaaata
atgatggaagagaaatctccaactttgcaacttgagagtttatatgaagctatacaactc
agcttgaaaaatgatcaaaactcaggattgataagagattcctacctcgaactggcctta
tggtatttgtatctgaagaagccaaagagaaagagttcagcaacaccattagcactcaag
cttcttttcagaaggcatagttctattaaggaatcaacaatagatataatagaaatatac
aattcactggtctggattgcaataagggctgcggcacaggtcagtgaagctgtgctagca
attaacctacttattggaaagaagaatgctagaactgacgaagtcaatcaaatggtattg
ccaaatatcccagagtttgccactgtggacattttgtcttcatacacagattatttgctt
gcatctgcaaagccagtatctggaatttccttgccagatgatacgcttctcacatccctt
tacaactccgaactgattttacgtgaaaaagaaatgcatttttttcttaaaaggcactta
cagctgtattcgtcctcttgtattgatgaattcccaaaagaactttttctaggattggaa
aaaccacatcttgcagagagagtcctatatgacacaatagccaagatatatcatgacagt
tccctgcagtctatcttttcttcaaaacttctttccagtacatcttctgtggacgttacg
tcatcagaaatggtagtaccaactgtaaacaaagaactttgctttcagtggtacattcct
cccctggaaagacctccaaaggaaggagaacctatggttttattattgtgtgcatacaac
acaaagctcttgaagagttcagatattaaactttccagttggggcaacatatttgttgac
tctttctggattccactgaacagggttatttcagttcatgagaaactttctaatcttgca
caaatagctgaactatcattgccagcaactcctgaaaatactgcaaatgaggatatatat
aaagtggatgaaacagaagagaaaccaattggtaaagatatagaaaacatgattcttgaa
tgctgctctgaaatattagctctgtttttgagtgacagagagccaacaccattaactgag
gtaccatttgatatctcgctgccttctatattcaatcttgagagacttttcgatcttgct
aatggctgtattatatcaggaggaagccttttcaactggatagtgtcgattatttcatga
DBGET
integrated database retrieval system
