Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101966556
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Entry
101966556 CDS
T10664
Symbol
Atrx
Name
(RefSeq) transcriptional regulator ATRX isoform X3
KO
K10779
transcriptional regulator ATRX
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
101966556 (Atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
iti03000
]
101966556 (Atrx)
03036 Chromosome and associated proteins [BR:
iti03036
]
101966556 (Atrx)
Transcription factors [BR:
iti03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
101966556 (Atrx)
Chromosome and associated proteins [BR:
iti03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
101966556 (Atrx)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ATRX_C
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
101966556
NCBI-ProteinID:
XP_013219305
UniProt:
A0A287CYU5
LinkDB
All DBs
Position
X:42229198..42451804
Genome browser
AA seq
2458 aa
AA seq
DB search
MTAEPMSESKLNTLVQKLHDFLAHSSEESEETSSPPRLVMNQSIDKTSGSANNSDMMENN
KEEGTSSSEKSKPSGSSRSKRKPSVVTKYVESDDEKPLDETVNEDVSNENSENDITMQSL
PKGTVIVQPEPVLNEDKDDFKGPEFRSRSKMKTENLKKRGEDGLHGIVSCTACGQQVNHF
QKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCK
KCILRNLGRKELSTIMDENNQWYCYICHPEPLLDLVTACNSVFENLEQLLQQNKKKIKID
SEKSTKVCEHAPKFSPKKNTSNCNGEEKKLDDSCSGSVTYNYSALTVPKEMIKKAKKLIE
TTANMNSSYVKFLKQATDNSEISSATKLRQLKAFKSVLADIKKAHLALEEDLNSEIQALD
AVNKEKNTKEHKVVDAKSETKVRKGEKIFALERKDISKSDGKLSRKQVDNEHMDQSIPIE
EQRANRSTGGEHKKSDRKEEPQYEPANTSEDLDMDIVSVPSSVPEDIFENLETAMEIQSS
TDFQGDGNSGTEQELESSSVKLNIPSKDNRGVKGADCQEVPQDKDGPKSSGLNPKSEKCG
PGQENTDNEHLTENEVPLLLEESDLRRSPRVKTTPLRRQTETNPATSNSDEESNEVVKEK
QKLSVPIRKKDKRNSSDSAIDNPKPNKLPKSKQSEIVDQNSDSDEMLAILKEVSSRMSHS
SSSDTDINETQTNHKTLYDLKTQKGKDDKGKRKRKSSTSGSDFDIKKGKSAKSSIISKKK
RQNQSESSNYDSELEKEIKSMSKIGAVRTTKKRFSNRKDYDSSEDEKNSKKGMDNQGQKS
LKTAQEGSSDDAERKQNFSSAESTIEKDKTIVELRDRLSKKQQPSVSSDVADKPSSGKEE
SLNSLGDKKIVETKEKSKHLRTKTCKKVQGGLSDVADKFPKKEQSDDSSEEDKKQNKKGT
EEKEKTIDLKKKVMKIERHYESSSDSTEKLPEGEESCHFPKGLKQSKSDTTDGEKKGKKM
KDKISKKKDELSDNVEKVPGKGDSCDSSEDKKIKNRASGREKKRRNLPEKSSRKRQDFSS
SDTEKCSMKQDGCDSSDKKPKRIELRERRNLNSKRNTKEIQSGSSSSDAEESSEDNKKQK
KQRASAKKKAGNVKEKKRNPLRTSNKRKQADITSSSSDVGDDDQNSVGEGSSDEQKIKPV
TENLVLSSHTGFCQSSGDEALCKSVPVTVDDDDDDNDPENRIAKKMLLEEIKANLSSDED
GSSDDEPEGGKKRTGKQNEENPGDEEAKNQVNSESDSDSEESKKPRYRHKLLRHKLTVSD
GESGEDKKTNPKENKEVKGRNRRKVSSEESEESDFQESGVSEEVSESEDEQRPRTRSAKK
AELEENQRSYKQKKKRRRIKIQEDSSSENKSHSEEEVKEEEEEEEEEEEDENDDSKSPGK
GRKKIRKILKDDKLRTETQNALKEEEERRKRIAEREREREKLREVIEIEDASPTKCPITT
KLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKSPGSGCILAHC
MGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEVSE
LATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDF
VVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKE
FRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVL
AVRMTPIQCKLYQYYLDHLTGVGNSNEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDYIS
KENKGYFDEDSMDEFIASDSDETSMSLSSDDYTKKKKTKGKKGKKDSSSSGSGSDNDVEV
IKVWNSRSRGGGEGNMDEAGNNPSVSLKLEDSKATSSSNPSSPAPDWYKDFVTDADAEVL
EHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASREKTEDKDKPLIYKGE
GKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVII
FDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVDQQQ
VERHFTMNELTELYTFEPDLLDDPNSEKKKKRDTPMLPKDTILAELLQIHKEHIVGYHEH
DSLLDHKEEEELTEEERKAAWAEYEAEKKGLTMRFNIPTGTNLPPVTFNAQTPYIPFNLG
ALSAMSNQQLEDLINQGREKVVEATNSVTAVRIQPLEDIISAVWKENMNLSEAQVQALAL
SRQASQELDVKRREAIYNDVLTKQQMLISCVQRILMNRRLQQQYNQQQQQQMTYQQATLG
HLMMPKPPNLIMNPSNYQQIDMRGMYQSVAGGMQPPPLQRAPPPMRSKNPGPSQGKSM
NT seq
7377 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgagcccatgagtgaaagcaagttgaatacattggtgcagaagcttcatgac
ttcctggcacactcatcagaagaatctgaagaaacaagttctcctccacgacttgtgatg
aaccaaagcattgataaaaccagtggttctgcaaataattctgatatgatggaaaataac
aaggaagagggaaccagctcttcagaaaaatccaaaccttcaggatcatcacgatcaaag
aggaaaccttcagttgtaacaaagtatgtagaatctgatgatgaaaaacctttggatgaa
actgtgaatgaagatgtttctaatgaaaattcagaaaatgatattactatgcaaagtttg
ccaaaaggtacagtgattgtacaaccagagccagtgctgaatgaagacaaagatgatttt
aaagggcctgaatttagaagcagaagtaaaatgaaaactgaaaatctcaaaaaacgcgga
gaagatgggcttcatggaatcgtgagctgcacagcttgtggacagcaggtcaatcatttt
caaaaagattccatttatagacacccttcactgcaagtccttatttgtaagaattgcttt
aagtattacatgagtgatgatattagccgtgactcagatggaatggatgaacaatgtaga
tggtgtgcagaaggcgggaacttgatttgttgtgacttttgccataatgccttctgtaag
aaatgcattctccgtaaccttggtagaaaggagctatctactataatggatgaaaataac
caatggtattgctacatttgtcacccagagcctttattggacttggtcactgcatgtaac
agtgtatttgagaacttagaacaattgttgcagcaaaataagaagaagataaaaattgac
agtgaaaagagtactaaagtatgtgaacatgcacccaaattttctccaaagaagaatact
tcaaattgcaatggagaagaaaagaaattagatgattcgtgttctggctctgtaacctac
aattattcagcactaactgtgcccaaagagatgattaaaaaggcaaaaaaattgattgag
accacagccaacatgaactccagttatgttaagtttttgaagcaggcaacagataattca
gaaatcagttctgctacaaagttacgtcagcttaaggcttttaaatctgtgttggctgat
atcaagaaggctcatcttgcattagaggaagatttgaattcagagattcaagctttggat
gctgtaaacaaagagaaaaataccaaagagcataaagttgtagatgctaagtcggaaaca
aaagtacgaaaaggagaaaaaatctttgctttggaaaggaaggatatttcaaagtcagac
ggtaaactgtccagaaaacaggtagataatgagcacatggatcagagtatcccaatagag
gaacaaagagcaaatagaagtactggtggtgagcataagaaatctgataggaaagaggaa
cctcagtatgaacctgctaatacttctgaagacttagacatggatattgtgtctgttcct
tcctcagttccagaggatatttttgagaatcttgagactgccatggaaattcagagttca
actgattttcagggggatggcaatagtggaactgagcaagaattggagagttcatctgta
aaattaaatattccttcaaaagacaacagaggagttaaaggtgctgattgccaggaagtt
ccacaagataaagatggccctaaaagttctggtttgaaccccaagtcagagaaatgtgga
cctggacaggaaaacaccgacaatgagcatttaactgaaaatgaagttcctttactttta
gaagaatctgatcttcgaagatccccacgtgttaagactacacccttgaggcgacagaca
gaaaccaaccctgcaacatctaattcagatgaagaaagtaacgaagtagttaaggagaaa
caaaaactatcagttccaatcaggaaaaaggacaagcgaaattcttctgacagtgctata
gataatcctaagcctaataaattgcctaagtccaagcaatcagagattgtggatcaaaat
tcagattctgatgaaatgttagcaatcctcaaagaggtaagcagcaggatgagtcacagt
tcttcttcagatactgatattaatgaaactcagacaaaccataagactctgtatgattta
aagactcaaaaagggaaagatgataaaggaaaaaggaaacgaaaaagttctacttctggc
tcagattttgatattaaaaaaggcaaatcagctaaaagctctataatttctaaaaagaaa
cgccaaaatcagtctgagtcttctaattatgactcagaattagaaaaagaaataaaaagc
atgagtaaaattggggctgtcagaacaaccaaaaaaagattttccaatagaaaagattat
gattcttctgaagatgaaaaaaacagcaaaaaagggatggataatcaagggcagaagagt
ttgaagactgcacaagaaggatcatctgatgatgctgaaaggaaacagaatttttcttca
gcagaaagcacaattgagaaagacaagaccatagtggaattaagagatcgactttctaag
aaacagcagccaagtgtttcttctgatgttgctgataagccttcttcagggaaagaggag
agtttaaattccctaggagacaaaaaaatagttgaaactaaagaaaagagcaagcatctg
agaaccaaaacatgtaaaaaagtacagggtggcttatctgatgttgctgataaattccca
aagaaagagcagagtgatgattcctctgaagaagataaaaagcagaacaaaaaggggact
gaagaaaaagaaaagactatagacttgaagaaaaaagtaatgaagatagaacggcattat
gaatcatcatctgatagcactgagaaattacctgagggagaagaaagttgtcattttcct
aagggcctaaaacaaagcaagagtgacacaactgatggagaaaagaaaggtaaaaaaatg
aaagataaaatttctaaaaagaaggatgagttatctgataatgttgaaaaggtaccaggg
aaaggagatagttgtgactcttcagaagataaaaagattaagaatagagcatcaggtaga
gagaagaaaagacgcaacttgcctgaaaagagttcaaggaagagacaagatttttcatca
tctgatactgagaaatgttccatgaaacaagatggttgtgactcttctgataagaaaccg
aaaagaatagaattgagggaaagaagaaatttaaattcaaagagaaataccaaggaaata
caaagtggctcatcatcttctgatgctgaggaaagttctgaagataataaaaagcagaag
aaacaaagagcttcagctaaaaagaaggcaggcaatgtcaaggaaaaaaagagaaacccc
ctaagaacaagcaataaaaggaagcaagcagacattacttcctcatcatctgatgtagga
gatgatgatcagaattctgtaggcgaggggagcagtgatgaacagaaaattaagcctgtg
actgaaaatttagtgctttcttcacacactggattttgccaatcttcaggagatgaagcc
ttatgtaaatcagtgcctgtcacagtggatgatgatgacgacgacaatgatcctgagaat
agaattgccaagaagatgcttttagaagaaattaaagccaatctttcctctgatgaggat
gggtcttcagatgatgaaccagaaggagggaaaaagagaactggaaaacaaaatgaagaa
aacccaggagatgaggaagcaaaaaatcaagtcaattctgaatcggattccgattctgaa
gaatctaaaaagccaagatacagacataagcttttgaggcacaaactgactgtgagtgat
ggagaatctggagaagacaaaaagacaaaccctaaagagaataaagaagtcaaaggcaga
aatagaaggaaggtgagcagtgaagagtcagaagagtctgattttcaggagtcaggagtt
agtgaagaagttagtgaatctgaagatgaacagcgacctagaacacggtctgcaaaaaag
gcagaattggaagaaaatcaacggagttataaacagaaaaagaaaagacgacgcattaag
attcaagaagattcatccagtgaaaacaagagccattctgaagaagaagtcaaagaagag
gaggaggaagaggaagaggaggaagaagatgaaaatgatgattccaagtctcctggaaaa
ggcagaaagaaaatccggaagattcttaaagatgataaactgagaacagaaacacaaaat
gctttgaaagaagaggaagagaggcgaaaacgtattgctgagagggagcgtgagcgagag
aaattgagagaggtgatagaaattgaagatgcttcacccaccaagtgtccaataacaacc
aaattggtcctagatgaagatgaagaaaccaaagaacctttagtgcaggttcatagaaat
atggttatcaaattgaaaccccaccaagtagatggtgttcagtttatgtgggattgctgt
tgtgagtctgtgaaaaagacaaagaaatctccaggttcaggatgcattcttgcacattgc
atgggacttggtaagactttacaggttgtaagttttcttcatacagttcttttgtgtgac
aaattggattttagcacagctttagtggtttgtcctcttaatactgctttgaattggatg
aatgaatttgagaagtggcaagagggattaaaagatgatgagaagctcgaggtctctgaa
ttagcaactgtgaaacgtcctcaggagagaagctacatgctacagaggtggcaagaagat
ggtggtgttatgatcatagggtatgagatgtacagaaatcttgctcaaggaaggaatgtg
aagagtcgtaaacttaaagaaatatttaataaagctttggttgatccaggccctgacttt
gttgtttgtgatgaaggccatattctaaaaaatgaagcatctgctgtttcaaaagctatg
aattctatacgatcaaggaggaggattattttaacaggaacaccgcttcaaaataaccta
attgagtatcattgcatggttaactttatcaaggaaaatttgcttggatccattaaggag
ttcaggaatagatttataaatccaattcaaaatggtcagtgtgcagattctaccatggta
gatgtcagagtgatgaaaaaacgtgctcacattctctacgagatgttagctggatgtgtt
cagaggaaagattatacagcattaacaaagtttttgcctccaaaacatgaatatgtgtta
gctgtgagaatgactcctattcagtgcaagctttatcagtactacttagatcacttaaca
ggtgtaggtaatagtaatgaaggtggaagaggaaaggcaggtgcaaaacttttccaagat
tttcaaatgttaagtagaatctggactcatccttggtgtttgcagctggactacataagc
aaagaaaataagggatattttgatgaagatagtatggatgaatttatagcttcagattct
gacgaaacttccatgagtttaagctccgatgattatacaaaaaagaagaaaacaaagggg
aagaaggggaaaaaagacagtagctcaagtggaagtggcagtgacaatgatgttgaagtg
atcaaagtttggaattcaagatctcgaggaggtggtgaaggaaatatggatgaagcagga
aacaacccttcagtttctttaaagctggaagatagtaaagctacttcctcttctaatcca
agcagcccagctccagactggtacaaagattttgttacagatgctgatgctgaggtttta
gagcattctggaaaaatggtacttctctttgaaattcttcgaatggcagaggaaattggg
gataaagttcttgttttcagccagtcactcatatctctggacctgattgaagattttctt
gaattggctagtagagagaaaacagaagataaagacaaaccccttatttataaaggtgag
gggaaatggctccgaaatattgactactaccgtttagatggttctactactgcacaatca
aggaagaaatgggctgaagaatttaatgatgaaactaatgtgagagggcggttgtttatc
atttccaccaaagcaggatctcttggaattaatctggtagctgctaatcgagtaattata
tttgatgcttcttggaatccatcttatgacatccagagtatattcagagtttatcgcttt
ggacaaactaagcctgtttatgtgtataggttcttagctcagggaaccatggaagataag
atatatgatcggcaagtaactaagcagtcattatcttttcgagtcgttgatcaacaacag
gttgagcgccattttactatgaatgagcttactgaactttatacttttgagccagactta
ttagatgaccctaattcagaaaagaagaagaagagggatactcccatgctgccaaaggat
actatacttgcagaacttcttcaaatacataaagaacacattgtaggatatcatgaacat
gattctcttttggaccacaaagaagaggaggagttgactgaagaagaaagaaaagcagct
tgggctgaatatgaagcagaaaagaagggactgaccatgcgtttcaacataccaactggg
accaatttaccccctgtcactttcaatgctcagactccttatattcctttcaatttggga
gccctgtcagcaatgagtaatcaacagctggaggacctcattaaccaaggaagagaaaaa
gttgtagaagctacaaacagtgtgacagcagtgaggattcagcctcttgaagatataatt
tcagctgtttggaaagaaaacatgaatctctcagaggcccaagtacaggcattagcatta
agtagacaagccagccaggagcttgatgtaaaacgaagagaggcaatctacaatgatgta
ctgacaaaacaacagatgttaatcagctgtgttcagcgaatactgatgaacaggaggctc
cagcagcagtacaatcagcagcaacagcaacaaatgacttatcagcaagcaactctaggt
cacctcatgatgccaaagcctccaaatttaatcatgaatccttctaactaccagcagatt
gatatgagaggaatgtatcagtccgtggctggtggtatgcagccaccacccttacagcga
gcaccacccccaatgagaagcaaaaatccaggaccttcccaagggaaatcaatgtga
DBGET
integrated database retrieval system
