Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101966732
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Entry
101966732 CDS
T10664
Name
(RefSeq) LOW QUALITY PROTEIN: sorting nexin-5-like
KO
K17920
sorting nexin-5/6/32
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101966732
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iti04131
]
101966732
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
iti04990
]
101966732
Membrane trafficking [BR:
iti04131
]
Endocytosis
Macropinocytosis
Sorting nexins
101966732
Domain-containing proteins not elsewhere classified [BR:
iti04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
101966732
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
DUF896
FAN1_HTH
Motif
Other DBs
NCBI-GeneID:
101966732
NCBI-ProteinID:
XP_040139627
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Position
X
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AA seq
386 aa
AA seq
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MNVLRSGSVDLNVDPSLQIDIPDALSERDKVKFTVHTKTTLPTFQSPEFSVTRQHEDFVW
LHDTLIETTDYAGLIIPPAPTKPDFDGPREKMQKXGSMTKEEFAKMKQELEAEYLAVFKK
TVSSHEIFLQQLSSHSVLSKDGNFHVFLEYDQDLSVRPKNTKEMFGGFFKSVVKSADEVL
FSGVKEVDDFFEQEKNFLINNYNKIKDSCAKADRMTRSHKNVADDYIHTAASLQSLALEE
PTVIKKYLLKVAELFEKLRKVEGCVSSDEDLKLTELLXYYMLNIEAAKDLLYRRTKSLID
YENSNKALDKARLKSKDVKLAEAHQQECCQKFEQLSESAKEELINFKRKRVAAFRKNLIE
MSELEIKHARNNVSLLQSCIDLFKNN
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgctgaggtctgggtctgtggacctgaatgttgatccctcacttcagattgac
atacctgatgcactcagtgagagagataaggtcaagtttacagtgcacaccaagactaca
ctgcccacttttcagagcccagagttttctgttacaagacaacatgaagacttcgtgtgg
ctacatgatacacttattgaaaccacagactatgctgggcttattattccccctgctcct
acaaaaccagatttcgatggtcctcgtgaaaagatgcagaaanctgggtctatgaccaaa
gaagagtttgcaaagatgaagcaagaactggaagctgaatatctcgctgtctttaagaag
actgtgtcctctcatgaaatatttcttcagcagctttcttctcattctgttctcagtaaa
gatggaaactttcatgttttcctggaatatgatcaggatctaagtgttaggccaaaaaat
accaaagaaatgtttggtggcttctttaaaagtgtggtaaaaagtgctgatgaagttctt
ttctctggagttaaggaggtagatgacttctttgagcaagagaagaacttccttattaac
aattacaacaagatcaaggattcctgtgctaaagctgacagaatgaccagatctcacaaa
aatgttgctgatgactatattcacactgcagcctccttgcagagcctggctttagaagaa
cccacagtcatcaaaaaatacctattgaaggttgctgaactctttgaaaaacttaggaaa
gtggagggttgtgtctcatcagatgaagatttaaagctgacagaacttctctgatactac
atgctcaatatagaggctgcaaaggatctcttatacagacgcaccaaatcccttattgac
tatgagaactcaaacaaagctctggataaagccaggttaaaaagcaaagatgtcaagttg
gctgaggcacaccaacaggaatgttgccagaaatttgaacagctttctgaatctgcaaaa
gaagaacttataaatttcaaacggaagagagtggcagcgtttagaaaaaacctaattgag
atgtctgaactggaaataaagcatgccagaaacaatgtctccctcttgcagagctgcatt
gacttattcaagaacaactga
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