Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101966798
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Entry
101966798 CDS
T10664
Symbol
Tsen34
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34 isoform X1
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
Enzymes [BR:
iti01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
101966798 (Tsen34)
Transfer RNA biogenesis [BR:
iti03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
101966798 (Tsen34)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
LAT2
Motif
Other DBs
NCBI-GeneID:
101966798
NCBI-ProteinID:
XP_013221623
UniProt:
I3N256
LinkDB
All DBs
Position
Unknown
AA seq
310 aa
AA seq
DB search
MLVVEVENGRSLVWGAEAVQALRERLGVGGRTVGALPRGPRQNSRLGLPLLLMPEEARLL
AEIGAVTLVSVPRPDPARHGLALASFKRQQEQSFQEQSALAAEARETRRQELLEKISEGQ
AAKKQKLEQNSGSCESQQAPGSQVAEGNETGDSQASGEQEEAVSSSPQPGLSDGVDPLPR
SALLVQLATARPRPVKAKPLDWRVQSKDWPHAGRPAHELRYRIYKDLWERGFFLSAAGKF
GGDFLVYPGDPLRFHAHYIAQCWAPDDPIPLQDLVSAGRLGTSVRKTLLLCSPHGNGMVA
YTSLQWASLQ
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgctggtggtggaggtggagaacggccgctccctggtgtggggcgccgaggcggtgcag
gcgctgcgggagcgcctgggagtcgggggccgcacggtgggcgccctgccgcgcgggccg
cgccagaactcgcgcctgggcctcccgctgctgctcatgcccgaagaggcgcggctcctg
gccgagatcggcgccgtgaccctggtcagcgtcccgcgccccgaccccgcccgccacggc
ctcgctctggcatccttcaaacgccagcaagagcagagcttccaggagcaaagtgccttg
gcagccgaggcccgtgagacccggcgtcaggagctgctggagaagatttcagaggggcag
gctgccaagaagcagaagctggaacagaattcggggtcctgcgagagccagcaggccccc
gggagccaggttgctgaagggaacgagactggagatagccaggcttcgggggagcaggag
gaagcagtttcctcctctccccagccagggctttctgatggggtagaccccctgcccaga
tctgccctgctggtccagctggccactgccaggcctcgacctgttaaggctaagcctctg
gactggcgcgtccagtccaaagactggccccatgctggccgtcctgctcatgagttgcgc
tacaggatctacaaagacttgtgggagagaggcttcttcctaagtgctgctggcaagttc
gggggtgacttcctcgtctatcctggtgacccactccgtttccatgctcactacattgcc
cagtgctgggcccctgatgaccccatcccactccaggatctggtctctgccggccgcctt
ggaaccagcgtcagaaagaccctcctgttgtgttctccacacggaaatggtatggtggcc
tacacctccctgcagtgggccagcctgcagtga
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integrated database retrieval system
