Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101967077
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Entry
101967077 CDS
T10664
Symbol
Trim27
Name
(RefSeq) zinc finger protein RFP
KO
K12009
tripartite motif-containing protein 27 [EC:
2.3.2.27
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
iti04121
]
101967077 (Trim27)
Enzymes [BR:
iti01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101967077 (Trim27)
Ubiquitin system [BR:
iti04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
101967077 (Trim27)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-Tbcl_FmdE
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
101967077
NCBI-ProteinID:
XP_005341976
UniProt:
A0A287CSH1
LinkDB
All DBs
Position
Unknown
AA seq
513 aa
AA seq
DB search
MASGSVAECLQQETTCPVCLQYFVEPMMLDCGHNICCACLARCWGAAETNVSCPQCRETF
PQRHMRPNRHLANVTQLVKQLRTERPSGPGGEMGVCEKHREPLKLYCEEDQMPICVVCDR
SREHRGHSVLPLEEAVEGFKEQIQNQLDHLKRVKDLKKRRRAQGEQARAELLSLTQMERE
KIVWEFEQLYHSLKEHEYRLLARLEELDLAIYNSINGAITQFSCNISHLSSLIAQLEEKQ
QQPTRELLQDIGDTLSRAERIRIPEPWITPPDLQEKIHIFAQKCLFLTESLKQFTEKMQS
DMEKIQELREAQLYSVDVTLDPDTAYPSLILSDNLRQVRYSYLQQDLPDNPERFNLFPCV
LGSPCFIAGRHYWEVEVGDKAKWTIGVCEDSVCRKGGVTSAPQNGFWAVSLWYGKEYWAL
TSPMTALPLRTPLQRVGIFLDYDAGEVSFYNVTERCHTFTFSHATFCGPVRPYFSLSYSG
GKSAAPLIICPMSGIDGFSGHVGSHGHSMETSP
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgggagcgtggccgagtgcctacagcaagagaccacttgcccggtgtgtctg
caatacttcgtcgagcccatgatgctcgattgtggccacaacatctgttgcgcgtgccta
gcccgctgctggggcgcagcggagactaacgtgtcttgtccgcagtgccgagagaccttc
ccgcagcggcacatgcggcccaaccggcatctagccaacgtgacccagttggtgaagcag
ctgcgcaccgagcgaccgtcagggcccggcggcgagatgggcgtgtgtgaaaagcatcgc
gagcccctgaagctgtactgcgaggaggaccagatgcccatttgcgtagtgtgcgaccgc
tcccgggagcatcgcggccacagcgtgctaccgctcgaggaggcggtggagggcttcaag
gaacaaatccaaaaccaactggaccatctaaaaagagtaaaagacttaaagaagagacgc
cgggcacagggggagcaggcacgagctgaactcttgagcctaacccagatggaaagggaa
aagattgtttgggagtttgagcaactgtatcactccttgaaggagcatgagtatcgcctt
ctggcccgccttgaggaactagacttggccatctataacagtatcaatggtgccatcacc
cagttctcttgcaacatctcccacctcagcagcctgattgcccagctagaagagaagcag
cagcagcccaccagggagctcctgcaggacatcggggatacattaagcagggctgaaaga
atcaggatccctgaaccttggatcacacctccagatctgcaagagaaaatccacattttt
gcccaaaaatgtctattcttaacggagagtctgaagcaattcacagaaaaaatgcagtca
gatatggagaaaatccaagaattgcgagaggctcagttatattcagtggacgtgactctg
gatccagatacagcttaccccagcctgatcctttctgataatctgcggcaagtgcgatat
agttacctccaacaggatttgcctgacaaccctgagcggttcaatctttttccctgtgtc
ttgggctctccatgtttcatcgctgggagacattattgggaggtagaggtgggagataaa
gccaagtggaccataggtgtctgtgaagactctgtatgcagaaaaggtggagtaacctca
gccccccagaatggattctgggcagtgtcattgtggtatgggaaagaatactgggcactt
acgtccccaatgactgcccttcccctgcggacccctctccagcgggtaggaattttcttg
gactatgatgctggtgaggtctccttctacaatgtgacagagaggtgtcacacctttact
ttctctcatgctaccttctgtgggcctgtccggccctacttcagtctgagttactcggga
gggaagagcgcagctcctctgatcatctgccccatgagtgggatcgatgggttttctggc
catgttgggagtcatggtcattccatggagacatccccttga
DBGET
integrated database retrieval system
