Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101967097
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Entry
101967097 CDS
T10664
Symbol
Tars1
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
101967097 (Tars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
iti01007
]
101967097 (Tars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
iti03016
]
101967097 (Tars1)
Enzymes [BR:
iti01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
101967097 (Tars1)
Amino acid related enzymes [BR:
iti01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
101967097 (Tars1)
Transfer RNA biogenesis [BR:
iti03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
101967097 (Tars1)
Prokaryotic type
101967097 (Tars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
101967097
NCBI-ProteinID:
XP_005325709
LinkDB
All DBs
Position
Unknown
AA seq
722 aa
AA seq
DB search
MSEEARGPSGKMGSEEKPVDAVEEKRKEGGKKKNKEGSGDGGRAELNPWPEYINTRLEMY
NKLKAEHDSILAEKAEKDSKPIKVTLPDGKQVNAESWKTTPYQIACGISQGLADNTVIAK
VNKVVWDLDRPLEGDCTLELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGCLCYGPPIEN
GFYYDMYLEEGGVSSNDFSSLETLCKKIIKEKQAFERLEVKKETLLEMFKYNKFKCRILN
EKVNTPTTTVYRCGPLIDLCRGPHVRHTGKIKALKIHKNSSTYWEGKADMETLQRIYGIS
FPDPKMLKEWEKFQEEAKNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNTLVEFIR
SEYRKRGFQEVVTPNIFNSRLWMTSGHWQHYSENMFSFEVEKEQFALKPMNCPGHCLMFD
HRPRSWRELPLRVADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAMEQIEDEIKGCLD
FLRTVYNVFGFSFKLNLSTRPEKFLGDIEVWNQAEKQLENSLNEFGEKWELNPGDGAFYG
PKIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTFVSHDGDDKKRPVIIHRAILGSVERMI
AILTENYGGKWPFWLSPRQVMVVPVGPTCDEYAQQVRQQFHDAKFMADIDLDPGCTLNKK
IRNAQLAQYNFILVVGEKEKTSGTVNIRTRDNKVHGERTVSETIERLRQLKQSRSKQAEE
EF
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaggaggccaggggcccttcagggaagatgggcagcgaagagaagccggtagat
gcagttgaagagaagcgaaaagaaggaggcaagaagaagaacaaagaaggatctggagat
ggaggtcgagcagagttgaatccttggcctgaatatattaacacacgtcttgagatgtat
aataaactaaaagcagagcatgattccattctagcagaaaaggcagaaaaagatagcaag
ccgattaaagtcacactacccgatggtaaacaggtcaatgcagaatcctggaaaactaca
ccttatcaaattgcttgtggaattagtcaaggcctggctgacaacactgttattgctaaa
gtgaacaaagttgtttgggacctagaccgcccactggagggagattgtactttggagctt
ctcaaatttgaggatgaggaagcacaagcagtatattggcattcaagtgctcacatcatg
ggtgaggccatggaaagagtctatggtggatgtttatgttatggtccaccaatagagaat
ggattctattatgacatgtacctcgaagaggggggtgtatccagcaatgatttctcttct
ttggaaactttatgtaagaaaatcattaaagaaaaacaagcttttgaaagattggaagtt
aaaaaggaaactttattggaaatgtttaagtacaacaagttcaagtgccggatattgaat
gaaaaagtaaatactccaactacaacggtctataggtgtggtcccttgatagatctctgc
cggggtcctcatgtcagacacactggcaaaattaaggctttaaaaatacacaaaaattct
tccacatactgggaaggcaaagcagatatggagaccctccagagaatttatggcatttca
ttccctgatcccaaaatgttgaaagaatgggagaagttccaagaggaggctaaaaaccga
gatcatagaaaaattgggagggatcaagaactatatttcttccatgagctcagccctgga
agttgctttttcctgcccaagggagcttacatttataatacacttgtggagttcatcagg
agtgaatataggaaaagaggatttcaggaggtagtcaccccaaacatcttcaatagccga
ctctggatgacctcaggccactggcaacactacagtgagaacatgttctcctttgaggtg
gagaaggagcaattcgctcttaaacccatgaactgcccaggacactgccttatgtttgat
catcgtccaagatcctggcgagagctgcctctgcgggtagctgattttggggtacttcat
aggaatgagctatcaggagcactcacaggactcacccgggtacgaagattccaacaggat
gatgcacacatattctgtgccatggagcagattgaggatgaaataaaaggttgtttggat
tttctgcgtacagtatataatgtatttggattttcttttaaattaaacctttctactcgc
ccagaaaaattccttggagatattgaagtttggaatcaagctgagaagcaacttgaaaac
agcctgaatgaatttggtgaaaagtgggagttaaatcctggtgatggagctttctatggt
ccaaagattgacatacagataaaagatgcaattggtcgataccaccagtgtgcaacaatt
cagctagattttcagttgcccatcagatttaatcttacttttgtaagccatgatggtgat
gacaaaaaaaggccagtgattattcatcgagccatcttggggtcagtggaaagaatgatt
gctatcctcactgaaaactatgggggcaaatggcctttctggctatctcctcgccaggta
atggtagttccagtggggccaacatgtgatgaatatgcccaacaggtacgacaacaattc
catgatgctaagttcatggcagacattgatctggatccaggctgtaccttgaataagaag
atcagaaatgcacagttagcacagtataacttcatcctagttgttggtgaaaaagagaaa
accagtggcactgttaatatccgtacaagagacaataaggtccatggtgaacgtactgtt
tctgaaaccattgaacggctacggcaactcaagcaatcccgcagcaaacaggcagaagaa
gaattttaa
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