Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101967260
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Entry
101967260 CDS
T10664
Symbol
Vps50
Name
(RefSeq) syndetin isoform X2
KO
K23288
syndetin
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iti04131
]
101967260 (Vps50)
Membrane trafficking [BR:
iti04131
]
Protein recycling
Others
EARP complex
101967260 (Vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
101967260
NCBI-ProteinID:
XP_005340589
UniProt:
A0A287D7C6
LinkDB
All DBs
Position
Unknown
AA seq
964 aa
AA seq
DB search
MQKIKSLMTRQGLKSPPESLSDLGAIESLRVPGKEEFRELREQPSDPQAEQELINSIEQV
YFSADSFDIVRYELEKLPPVLNLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDSEETVSASEG
SNVMGTEETNFDRGYVKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIIS
RLMQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLDELRMFLENETWELCPVKSNFSI
LQLHEFKFMEQSRSPSVSPSKQPVSTSSKTVTLFEQYCSGGNPFEIQASHKDEETEDVLA
SNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSVSRETLKSRKKSDYSLN
KVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDSL
ESTGLGLSSSRLRTTLNRIQESLIDLEVSADPTATLTAAEERKEKVPSPHLSHLVVLTSG
DSLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAVKKPFLQQFYSQTVSTASELRKPI
YWIVAGKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDALLKEFEQFNRRLNEVSKRVRIP
LPVSNTLWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDK
EFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLAAIDDID
RPKR
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaataaaatctctcatgacccgacagggtctgaaaagccctccagagagcctc
agtgatctcggtgctattgagagtctccgggtccctggaaaggaggaattccgggaactt
cgagaacagccaagtgaccctcaagctgaacaagagctaattaatagtattgaacaagta
tatttttctgcagactcatttgatattgtcagatatgagctggagaagctcccacctgtt
ctcaatttgcaagaattagaggagtatagagacaaattgaaacaacagcaagctgcagtc
tctaaaaaagtagcagatttaatccttgaaaaacagcctgcttatgtgaaggaacttgaa
agagttacctcattgcagacaggtctccagttagctgcagttatctgcacaaatgggagg
agacacttgaatattgcaaaggaaggttttactcaagctagtttaggccttcttgcaaat
caaaggaaacgtcagttgctgattggacttctgaaatctctgagaactataaaaacattg
caaagaacagatgtacgcttaagtgaaatgctggaggaggaagactatccaggagctatt
cagttgtgcctggaatgtcagaaagctgccagtacttttaaacattatagttgtataagt
gagctgaattcaaagctgcaagatactttagaacaaattgaggaacaattggatgtagct
ctttccaaaatctgcaagaattttgacattaatcattataccaaggttcaacaagcttat
cgacttcttggaaaaacacagactgcaatggatcaacttcatatgcactttacccaagcc
attcacaatactgtgtttcaagttgtccttggttatgtggaattatgtgcaggaaacact
gatacaaaattccaaaagctgcagtataaagatctctgtacgcatgtgacaccagacagc
tatattccgtgtcttgctgacctgtgtaaagcactgtgggaagtaatgctcagctattac
aggactatggaatggcatgaaaagcatgacagtgaggaaactgtttcagcatctgaagga
agtaatgtgatgggtactgaagaaaccaactttgatcgtggctatgtgaaaaagaagtta
gaacatggacttacacgaatatggcaggatgttcagctgaaagtgaaaacctacttgctt
ggaactgatttgtctatattcaaatatgatgacttcatctttgttttggatataatcagc
aggttgatgcaagttggagaagaattttgtggtagcaagtctgaagttttgcaagaatct
ataagaaaacaaagcgtcaactatttcaagaactaccatagaacacgacttgatgaactg
agaatgttcttagagaatgagacctgggaactttgtcctgttaagtcaaatttcagcatt
ttgcaacttcatgaatttaaattcatggaacagtctcgttccccatcagtttcacctagt
aagcagccagtctcaacttcttcgaaaacagttaccttgtttgagcaatactgtagtggt
gggaatccatttgaaattcaggccagccacaaagatgaagaaacagaagatgtcttggct
tctaatgggtatgaatctgatgaacaagaaaagagtgcctatcaggaatatgacagtgac
agtgatgttcctgaggaactcaagcgagattatgtggatgagcagacaggagatgctcct
gtgaaaagtgtttctcgagaaactctaaaaagtcggaagaaatcagattacagtctaaat
aaagtgaacgcacccatcttaacaaatacgacattgaatgtaataaggcttgttgggaaa
tatatgcagatgatgaacattcttaagcctattgcctttgatgttatccatttcatgtct
cagctgtttgattattacttatatgcaatatataccttttttggccggaatgattcattg
gaatcaacaggacttggtcttagtagtagtagattaagaacaactctcaacagaatacaa
gaaagccttattgatttggaagtttcagctgatcctactgccacactcacagcagcagaa
gaaagaaaggagaaggtacccagcccacacctcagtcaccttgtggttttgacatctggg
gattcattgtatgggttggcagaaagagtagtagccacggaatccctggtattcctggct
gaacagtttgaattccttcagccacatctggatgctgtgatgccagcagtcaaaaagccc
tttctgcagcagttttattctcagacagtctcaactgctagtgaactacgcaaaccaatt
tattggattgtagccggtaaagccatcgattatgaacagatgctgctcctaatggctaat
gtgaaatgggatgtaaaagaaatcatgtcacagcataacatatacgtagatgcattgtta
aaggaatttgagcagtttaacagaaggttaaatgaagtttctaagagagttcggataccc
ttgcctgtgtctaatacactttgggaacattgtatacgattggctaataggactattgtg
gaaggatatgccaacgtcaagaagtgcagtaatgagggtcgtgccttgatgcaattggat
tttcaacagtttttaatgaaacttgaaaagctaacagatattagacccattcctgataaa
gaatttgtggaaacctatatcaaagcctactacctaactgagaatgacatggaacgctgg
atcaaagagcacagggaatattcaacaaagcagctgaccaatctggtgaatgtttgccta
ggatcccatatcaataagaaagcaagacagaaacttttagcagctatagatgatatagac
cgacctaaaagataa
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integrated database retrieval system
