Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101967295
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Entry
101967295 CDS
T10664
Name
(RefSeq) BRCA1-associated protein isoform X1
KO
K10632
BRCA1-associated protein [EC:
2.3.2.27
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04014
Ras signaling pathway
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
101967295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
iti04121
]
101967295
Enzymes [BR:
iti01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101967295
Ubiquitin system [BR:
iti04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101967295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRAP2
zf-UBP
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_5
zf-RING_11
zf-RING_UBOX
zf_RING_Vps8_fungal
zf-ANAPC11
zf-C3HC4_3
RRM_1
zf-C3H2C3
Sec10_N
zf-RING_16
V_ATPase_I
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
101967295
NCBI-ProteinID:
XP_005329682
UniProt:
I3MED5
LinkDB
All DBs
Position
Unknown
AA seq
592 aa
AA seq
DB search
MSVSLVVIRLELAEHSAVPAGFGFSAAAGEMSNEEIKKKTLASAVACLEGKSPGEKATII
HQHLGRREMTDVIIETMKSNPDEVKDAMEEKKSSEASLTVQRSRDQSKDCINAAPDSPSK
QLPDQISFFSGNPSVEIVHGIMHLYKTNKMTSLKEDVRRSAMLCILTVPATMTSHDLMKF
VAPFNEVIEQMKIIRDSTPNQYMVLIKFSAQADADSFYMACNGRQFNSIEDDVCQLVYVE
RAEVLKSEDGASLPVMDLTELPKCTVCLERMDESVNGILTTLCNHSFHSQCLQRWDDTTC
PVCRYCQTPEPVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQL
TNHRVWDYAGDNYVHRLVASKTDGKIVQYECEGDTCQEEKIDALQLEYSYLLTSQLESQR
IYWENKIVRIEKDTAEEINNMKTKFKETIEKCDNLEHRLNDLLKEKQSVERKCTQLNTKV
AKLTTELQEEQEMNKCLRANQVLLQNKLKEEERLLKETCDQKDLQITEIQEQLRDVMFYL
ETQQQISHLPAETRQEIQEGQINIAMASTSSPSSSGGSGKLPSRKGRSKRGK
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgtcactggttgtcatccgactggagctcgcggaacactcggccgttcccgct
ggcttcggcttcagcgccgcggctggggaaatgtctaatgaggagatcaaaaagaagaca
cttgcttcagctgttgcctgtttagaagggaagtcaccaggggaaaaagcaacaatcatt
catcagcaccttggccgtcgggaaatgacagatgtaatcattgagaccatgaagtccaac
ccagatgaggtaaaagatgcaatggaagaaaagaagtcttcagaagcatccctcactgtg
cagagaagtagagatcaaagtaaagattgcataaatgcagctcctgattctccatccaaa
cagcttccagaccagatttcattcttcagtggaaatccttctgttgaaatagttcatggg
attatgcacctatataagacaaataagatgacctccttaaaagaagatgtgaggcgcagt
gccatgctgtgtattctcacagtccctgctacaatgaccagtcatgaccttatgaagttt
gtcgccccatttaatgaagtaattgaacaaatgaaaatcatcagagactctactccaaat
caatatatggtgctgataaagtttagtgcacaggctgatgcagatagtttttatatggca
tgcaatggtcgtcagttcaactcaatcgaagatgatgtttgccaactggtctatgtggaa
agggctgaagtgctgaaatctgaagatggtgccagcctccctgtgatggacctgactgag
ctccccaagtgcacggtgtgtctggaacgtatggacgagtctgtgaatggcatcctcacc
accttatgcaaccacagcttccacagccaatgtctgcagcgctgggacgacacgacgtgt
cctgtttgccggtactgtcaaacaccagagccagtagaagaaaataagtgttttgagtgt
ggtgttcaggaaaatttatggatttgtttaatttgcgggcacataggatgtgggcgatat
gtcagtcgacatgcttataagcactttgaagagacacagcacacatatgccatgcagctc
actaaccatcgagtctgggactatgctggagataattatgtccatcgactggttgcaagt
aaaacagatggaaaaatagtacagtatgaatgtgagggtgacacttgccaggaggagaaa
atagatgctttacagttagagtattcatatttactaacaagccagctggaatctcagcga
atctattgggaaaacaagatagtgcggatagagaaggacacagcagaggaaattaacaac
atgaagaccaaatttaaagaaacgattgagaagtgtgataatctggagcacagactcaat
gatctcctgaaagaaaagcagtctgtggaaaggaagtgcactcagctaaacacgaaagtg
gccaaactcacaactgagctccaggaggagcaggaaatgaataagtgtttgcgggccaac
caggtcctcctgcagaacaagctaaaggaggaggaaaggttgttgaaggagacctgtgac
caaaaagaccttcagatcaccgagatccaggagcagctacgtgatgtcatgttctacctt
gagactcagcagcagatcagccatctacctgctgagacccggcaggaaatacaggaagga
cagatcaacattgccatggcctccacctccagcccctcctcttcagggggcagtgggaag
ctgccctccaggaagggtcgaagcaagaggggcaagtga
DBGET
integrated database retrieval system
