Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101967382
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Entry
101967382 CDS
T10664
Symbol
Rorb
Name
(RefSeq) nuclear receptor ROR-beta isoform X1
KO
K08533
RAR-related orphan receptor beta
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
101967382 (Rorb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
iti03000
]
101967382 (Rorb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
iti03310
]
101967382 (Rorb)
Transcription factors [BR:
iti03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
101967382 (Rorb)
Nuclear receptors [BR:
iti03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
101967382 (Rorb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
101967382
NCBI-ProteinID:
XP_005324165
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All DBs
Position
Unknown
AA seq
470 aa
AA seq
DB search
MCENQLKTKADATAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQ
RNCLIDRTNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQ
QQSGEAEALARVYSSSISNSLSNLSNETSGTYANGHVIDLPKSEGYYSVDSGQPSPDQSG
LDMTGIKQIKQEPIYDLTSVPNLFTYSSFNNGQLAPGITMTEIDRIAQNIIKSHLETCQY
TMEELHQLAWQTHTYEEIKAYQSKSREALWQQCAIQITHAIQYVVEFAKRITGFMELCQN
DQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSDDLVNEAFDFAKNL
CSLQLTEEEIALFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLDDETLAKL
IAKIPTITAVCNLHGEKLQVFKQSHPDIVNTLFPPLYKELFNPDCATVCK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgagaaccagctcaaaactaaagctgacgccactgcacaaattgaagtgatacca
tgcaaaatttgtggcgataaatcctccgggattcactacggagtcatcacgtgtgaaggc
tgcaagggattcttcaggaggagccagcagaacaatgcctcttactcctgcccaaggcag
agaaactgtttaattgacagaaccaacagaaaccgttgccaacactgccgactgcagaag
tgtcttgccctaggaatgtcgagagatgctgtgaagttcgggaggatgtccaagaagcag
agggacagcctgtatgctgaggtgcagaagcaccagcagcggctgcaggagcagcggcag
cagcagagcggggaggcggaagcccttgccagggtgtatagcagcagcatcagcaacagc
ctgagcaacctgagcaatgagaccagcggcacttacgccaacgggcatgtcatcgacctg
cccaagtctgaaggttactacagcgtagactccggtcagccatcccccgatcaatcagga
cttgacatgactggaatcaaacagataaagcaagaacctatctatgacctcacctccgta
cccaacttgtttacctatagctctttcaacaacgggcagttagcaccagggataacgatg
acagaaatcgatcgaattgcacagaacatcattaagtcccacttggagacatgtcagtac
accatggaagagctgcaccagctggcatggcagacccacacctatgaagaaatcaaagcc
tatcaaagcaagtccagggaagcactgtggcagcaatgtgccatccagatcactcatgcc
atccagtacgtggtggagtttgcaaagcggataacaggcttcatggaactctgccaaaat
gatcagatactgcttctgaaatcaggttgcttggaagtggttttagtgagaatgtgccgt
gccttcaacccattaaacaacactgttctgtttgaaggaaaatatggaggaatgcaaatg
ttcaaagccttaggttctgatgacctagtgaatgaagcatttgactttgcaaagaatttg
tgttccttgcaactgaccgaagaagagattgctttgttctcatctgctgttctgatatct
ccagaccgagcctggctgatagaaccaaggaaggtccagaaacttcaggaaaaaatttat
tttgcacttcaacatgtgattcagaagaatcacctggatgatgagaccttggcaaagtta
atagccaagataccaaccatcacggcagtttgcaacttgcacggggagaagctgcaggta
tttaagcaatctcatcctgacatagtgaatacactgtttcctccattatacaaggagctc
tttaaccctgactgtgccaccgtctgcaaatga
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