Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101967423
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Entry
101967423 CDS
T10664
Symbol
Col9a2
Name
(RefSeq) collagen alpha-2(IX) chain
KO
K08131
collagen type IX alpha
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04151
PI3K-Akt signaling pathway
iti04510
Focal adhesion
iti04512
ECM-receptor interaction
iti04820
Cytoskeleton in muscle cells
iti04974
Protein digestion and absorption
iti05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
101967423 (Col9a2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101967423 (Col9a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101967423 (Col9a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
101967423 (Col9a2)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
101967423 (Col9a2)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
101967423 (Col9a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
iti00535
]
101967423 (Col9a2)
Proteoglycans [BR:
iti00535
]
Extracellular matrix (ECM) proteoglycans
Others
101967423 (Col9a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
101967423
NCBI-ProteinID:
XP_005317923
UniProt:
I3M6W1
LinkDB
All DBs
Position
Unknown
AA seq
688 aa
AA seq
DB search
MAAAAAPRGLLILLQVLGLALAQIRGPPGEPGPPGPPGPPGVPGSDGIDGDKGPPGKAGP
PGSKGEPGKPGPDGPDGKPGIDGVTGAKGEPGSVGNPGVKGQPGLPGPPGLPGPGFAGPP
GPPGPVGLPGEIGIPGPKGDPGPEGPSGPPGPPGKPGRPGTIQGLEGSADFLCPTNCPAG
VKGPPGLQGVKGHPGRRGILGDPGRQGKPGPKGDVGASGEQGIPGPPGPQGIRGYPGMAG
PKGETGLRGYKGMVGSIGAPGSPGEEGPRGPPGRAGEKGDVGSQGAPGPQGITGPKGATG
PPGIDGKDGTPGIPGMKGHVGQAGRPGSPGHQGLAGVPGQPGTKGGPGDKGEPGQQGLPG
FSGPPGKEGEPGPRGEIGPRGIVGQKGDQGERGPVGQPGPQGRQGPKGEQGAPGIPGPQG
LPGIKGDKGSPGKPGPRGGVGDPGVAGLPGEKGEKGESGEPGSKGQPGVRGEQGYPGPSG
DAGAPGVQGYPGLPGPRGQAGDRGVPGLPGRQGVAGRAASDQHIEDVVLKMMQEQLAEVA
VSAKREALGSVGMMGPPGPPGPPGYPGKQGPNGHPGPRGIPGVVGAVGQIGNTGPKGKRG
EKGDQGEVGRGHPGMPGPPGIPGLPGRPGQAINGKDGDRGSPGAPGEAGRPGLPGPVGLP
GFCEPAACLGASAYASARLTEPGSIKGP
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgcggcagccccccgcggcctccttattctcctacaggtgctcgggctcgcc
ctggctcagatcagaggaccgccaggagagcccgggcccccaggccctcctgggccgcca
ggagtacctggatctgatggcatcgacggtgacaagggaccccctgggaaagctggccct
ccgggatccaagggagagcctggcaaacctgggccagatgggcccgatgggaagcctggg
attgatggtgtaactggagccaaaggagagcctggttctgtggggaatcctggagtcaag
ggccaacccgggctcccaggcccccctggcctgccaggccctggttttgctggacctcct
ggacctccaggacctgttggcctccctggtgagattggaatcccaggccccaagggggat
ccaggaccagagggaccatcagggcccccaggcccccctgggaaaccgggacgcccagga
accattcagggcctggaaggcagtgctgacttcctgtgtccaaccaactgtccagctggt
gtgaaagggcccccagggctgcagggagtaaaggggcatcctggcagacggggcattctg
ggtgatcctggccgccagggaaagccgggtcccaagggagatgtgggtgcctctggagag
caaggcatccctggaccaccgggtccccagggcattaggggctacccaggaatggcagga
cctaagggagaaacgggtcttcgtgggtataaaggcatggtgggctccattggtgctcct
gggtcaccgggtgaggaaggtccaagagggccaccaggtcgagctggggagaagggtgat
gtgggtagccaaggtgcaccaggaccccaggggataacaggcccaaagggagcaactggc
cccccaggcatcgatggcaaggatggaaccccaggcatacctggcatgaagggccacgta
ggacaggcaggacgaccaggaagcccaggccaccagggcttagcaggtgtgccgggccag
ccagggacaaaaggaggtcctggagataagggtgagcctggccagcagggtctccctgga
ttttctggtccccctgggaaggagggagagccaggacccagaggagaaattggtcctcgg
ggcatcgtgggacagaagggtgaccagggtgaaagggggccagtgggacagccaggtccc
caaggacgacagggccccaagggagagcagggagcccctggaatcccaggaccccaaggc
ttgccaggcatcaagggagataagggctccccaggaaagcccgggccccgcggcggagtg
ggagacccgggggtggccggcctcccgggggagaaaggcgagaagggcgaatctggtgag
ccggggtccaagggacagccaggagtccgcggagagcagggctaccctggccccagcggg
gatgctggcgccccaggagtgcagggttaccctgggctgcctggccctcgaggacaggct
ggagaccgaggcgtgccaggactgccagggagacagggcgtggcgggccgagctgctagt
gaccagcacatcgaagatgtggtgctgaagatgatgcaagagcaactggcagaggtggct
gtgagtgccaagcgggaagcccttggctcagttgggatgatgggtcctccaggaccacct
ggcccgcctggatacccaggcaagcagggcccgaatgggcaccctggccctcgaggaatt
ccaggagtcgtgggagctgtgggtcagattggcaatactgggcccaagggaaagcgtgga
gagaagggtgaccaaggagaagtagggcgtgggcaccctgggatgcctgggcccccaggg
atcccaggactccctggccggcctgggcaggcaatcaacggcaaggatggagacagaggg
tccccaggggctccaggagaagcaggccgacctggcctgccaggccctgtgggactgcca
ggtttctgtgagcctgcagcctgcctgggggcttcagcctatgcctcagcccgactcact
gagccgggatccatcaaggggccatga
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