Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101967625
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Entry
101967625 CDS
T10664
Symbol
Top3a
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03440
Homologous recombination
iti03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101967625 (Top3a)
03460 Fanconi anemia pathway
101967625 (Top3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
iti03032
]
101967625 (Top3a)
03400 DNA repair and recombination proteins [BR:
iti03400
]
101967625 (Top3a)
Enzymes [BR:
iti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
101967625 (Top3a)
DNA replication proteins [BR:
iti03032
]
Eukaryotic type
DNA Topoisomerases
101967625 (Top3a)
DNA repair and recombination proteins [BR:
iti03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
101967625 (Top3a)
FA (Fanconi anemia) pathway
101967625 (Top3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Zn_ribbon_recom
Motif
Other DBs
NCBI-GeneID:
101967625
NCBI-ProteinID:
XP_005339523
LinkDB
All DBs
Position
Unknown
AA seq
1011 aa
AA seq
DB search
MIFPVTRYVFRWLRQSTCRDLSRSAMEVAFRGVRKVLCVAEKNDAAKGIADLLSNGRMRR
REGLSKFNKIYEFDYHLYGQSVTMVMTSVSGHLLAHDFQMQFRKWQSCNPLVLFEAEIEK
YCPENFIDIKKTLERETRQCQALVIWTDCDREGENIGFEIIHVCKAVKPGLQVLRARFSE
ITPRAVRTACENLTEPDQRISDAVDVRQELDLRIGAAFTRFQTLRLQKIFPEVLAEQLIS
YGSCQFPTLGFVVERFKAIQAFVPEIFHRIKVTHDHKDGTVEFNWKRHRLFNHTACLVLY
QLCMEDPLATVVEIRSKPKSKWRPQALDTVELEKLASRKLKINAKETMRIAEKLYTQGYI
SYPRTETNIFPKDLNLMALVEQQTPDPHWGAFAQSILERGGPTPRNGNKSDQAHPPIHPT
KYTSNLQGDERRLYEFIVRHFLACCSQDAQGQETTVEIDIAQERFVAHGLMILARNYLDV
YPYDHWSDKLLPVYEQGSRFQPSTVEMVDGETSPPQLLTEADLIALMEKHGIGTDATHAE
HIETIKARMYVGLTSDKRFLPGHLGMGLVEGYDSMGYEMSKPDLRAELEADLKLICEGKK
DKFVVLRQQVQKYKQVFIEAVAKAKKLDEALSQYFGEGAEVAQQEEIYPTMPEPIQKCPQ
CNRDMVLKTKKSGGFYLSCTGFPECRSAIWFPDSVLEASRDGSVCSVCQPPPVYRLKLKF
KRGSLPPTMPLEFVGCIGGCDETLKEIMGLRFSRGPPRASQPASQPSGYLQASQSLNRMD
TSQHSQPQPPASRQTRTSKALIQTLPPPAATVENNSITCNCGQEAVLLTVRKEGPNRGRQ
FYKCSSNSCNFFLWADSSHLGEGEAPTSSSRPPGSSLGHPPGSLGGFSRPGSGSGSGSSG
NTSCLCNQPAVTRTVQKDGPNKGRQFHTCAKPREQQCGFFQWTDENVAPGEAGTFAALPW
PRGRGRTQGSEARSRRPRAGSSDTESTAKRPRKCSLCHQPGHTRPFCPQNR
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgatcttcccagtcacccgatacgtgttccgttggctgcgacagtctacatgccgtgac
ttgtcccgctccgccatggaagttgccttccgaggcgtgcggaaagtcctctgtgtggcc
gagaaaaatgacgcggccaagggtatcgcggacctgctgtccaacggtcgcatgaggcgg
agagaaggactttctaaattcaacaagatctatgaatttgactatcatctttatggacag
agtgttaccatggtgatgacttcggtttctgggcatttactagctcatgatttccagatg
cagtttcgaaaatggcaaagctgcaaccccctagtcctctttgaagctgaaattgaaaag
tactgcccagagaattttatagacatcaagaaaactctagaacgagaaacacggcagtgt
caggccttagtgatctggactgactgtgacagagaaggtgaaaacattgggtttgagatt
atccatgtgtgcaaggctgtgaagcctggtctacaagtgttgagagcccgtttttctgag
atcacgccacgtgctgtcaggacagcctgtgaaaacctgactgagcctgatcaaagaatc
agtgatgctgtggatgtgaggcaggagctggacctaaggattggagctgccttcactaga
ttccagaccctgcggcttcagaagatttttcctgaggtgctggcagagcagctcattagc
tatggcagctgccagttcccgacactggggttcgtggtagaaaggttcaaagccattcag
gcttttgtgccagaaatcttccacaggattaaagtaactcatgatcacaaagatggtacc
gtagaattcaactggaaaagacatcgtctgtttaatcacacagcttgtcttgtcctctat
cagttatgtatggaggatcccctggcaactgtggtggagatcaggtctaagccaaagagc
aagtggaggcctcaagcattggacactgtggagctggagaagctggcttctcgcaagttg
aaaataaatgctaaggaaaccatgaggattgctgaaaagctctacactcaagggtacatc
agctatccccgaacagaaacaaatattttccccaaagacctaaacttgatggcactggtg
gaacagcagaccccagatccacactggggggcctttgctcagagcattctcgagcggggt
ggccccaccccacgcaacggaaacaagtctgatcaagctcaccctcccatccatcccacc
aagtacaccagcaacttgcagggagatgaacgtcgactatatgagttcatcgtccgtcat
tttctagcctgctgttcccaagatgctcaggggcaagagactactgtggagattgacatt
gctcaggaacgctttgtggcccatggtctcatgattctggcccgaaactacctggatgtg
tatccctatgatcactggagtgacaagctcctccctgtctatgagcaaggctctcgcttc
cagcccagcactgtggaaatggtggatggggagaccagcccaccacaactgctcactgag
gctgaccttatcgccctcatggagaagcatggcattggtactgatgcaactcacgcagag
cacattgagaccatcaaagctcggatgtatgttgggctcacctcagacaagcggtttctc
ccagggcacctgggcatgggacttgtggaaggttacgattctatgggctatgaaatgtcc
aagccagacctccgggccgagctggaagctgatctaaagctgatctgtgagggaaagaag
gacaaatttgtggttctaaggcagcaggtgcagaaatacaagcaggttttcattgaagca
gtggctaaggcaaagaaattggacgaggccttgtcccaatactttggggaaggggcagaa
gtggcccagcaagaagagatctacccaaccatgccagagcccatccagaagtgcccacag
tgcaacagggacatggtcctcaagactaagaagagtggcgggttctacctcagctgcacg
ggtttcccagagtgtcgatcagctatatggtttcctgactctgtgctagaggctagcaga
gacgggagtgtatgttcagtttgtcagccaccccctgtgtacaggttgaagttaaagttc
aagcgtggcagtcttcccccaaccatgccccttgagtttgttggttgtattggtggatgt
gatgaaaccctaaaggagatcatgggcctgagattttcacgggggccccccagagctagc
cagcctgccagccagccctctggctacctgcaggctagccagtccctgaacaggatggac
accagccagcacagccagccacagcctcctgccagcagacagactagaacctcaaaggct
ctgatccagactctcccaccacctgcagcaacagttgaaaacaactccattacctgcaac
tgcggccaagaagctgtgctgctcactgtccgaaaggagggccccaatcgaggccggcaa
ttctataaatgcagcagcaacagctgcaacttcttcctgtgggctgacagcagccatctt
ggagaaggagaggctcctacctctagttcaaggcccccaggcagctcactgggacaccca
ccaggctcattgggtgggttcagcagacccggcagtggcagtggcagtggcagcagtggc
aacacatcctgcctatgcaaccagcctgctgtcacacggactgtgcaaaaggatggaccc
aacaaaggacgccagttccatacatgtgccaagccaagagaacagcaatgtggcttcttt
cagtggactgatgagaatgtggccccaggggaggcagggacttttgcagcactaccctgg
ccaagaggcagaggaagaacgcagggatcagaggctaggagcagaagaccccgagctggc
tcctcagacacagagtccacggcaaagagaccccggaaatgcagtctttgccatcagcca
ggacacacccggcctttctgtcctcagaacagatga
DBGET
integrated database retrieval system
