Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101967683
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Entry
101967683 CDS
T10664
Name
(RefSeq) synphilin-1
KO
K04558
synphilin-1
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti05012
Parkinson disease
iti05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05012 Parkinson disease
101967683
05022 Pathways of neurodegeneration - multiple diseases
101967683
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Paralog
GFIT
Motif
Pfam:
SNCAIP_SNCA_bd
Ank_4
Ank_2
Ank
Ank_5
Ank_3
Motif
Other DBs
NCBI-GeneID:
101967683
NCBI-ProteinID:
XP_040129282
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All DBs
Position
Unknown
AA seq
961 aa
AA seq
DB search
MEAPEYLDLDEIDFSDDISYSVTSLKTIPELCRRCDSQNEDRSVSSSSWNCGVSTLITNA
QKPTGIAEVYSKFRPVKRVSPLKHQPETLENNESDDQKNHKVEYPKVGESDQGPQPEELG
PEDGVGGLPSKSSESSTALGELEHYDLDMDEILDVPYIKSSQQLASFTKVTSEKRILGLC
TTINGLSGKASSTGSTENSPSSMTPFCVLSPVKSPHLRKASTVLRDQHKLSTEESESSPP
LVTCGSAYEPESQNKDFLNKAFSDLHSRKIEKTMPDCQLRGFHLQSAATESKLEEPVKVM
SWTSSQGPEERNEYLKKVKSILNIVKEGQISLLPHLAADNLDKIHDENGNNLLHIAASQG
HAECLQHLTSLMGEDCLNERNTEKLTPAGLAIKVTGWGLGSPQLKSVFYVFKFLEAKVLD
GRERRVIYQANSNEHITCQRLPISITSCFEILRLRSNLLSNKIKLQTLVEYGANVTMQNH
AGEKPSQSAERQGHTLCSRYLVVVETCMSLASQVVKLTKQLKEQTMERVTLQNQLQQLLE
AQKSEGKSLPSSPSSPSSPASRKSQWKSSDAEDESTAKSKPGVQEGIQVLGNLSASSRAR
AKAKDEDSDKILRQLLGKEISENVCTQEKLSLEFQDAQTTSRNLKKIPLEKRELKLARLR
QLMQRSLSESDTDSNNSEDPKNTPVRKADRPRPQPIVESVESIDSTESLHLMIKKHSLAS
GRRFPFSTKASKSLEGHSPSPTSESSEPDLEPQCPVSGNTPPSQPSGEPTQCSPDSTAAQ
KVAMSPKSALKSPSSKRRTSQNLKLRVTFEEPVVQMEQTNLELNGEKDKDKGRTLQRTPT
SSESGEQLKRPFGTFRSIMETLSGNQNNNNNYQAATQLKTSTLPLTSLGRKMTDAKGNPA
SSASKGKNKAEMYSSCIHLSSNRLIEEHLRNYARHNDINRTMKKSYSIKHIDEPESKELF
L
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atggaagcccctgaatatcttgatttggatgaaattgacttcagtgatgacatatcttat
tcagtcacatcactcaagaccatcccagagctgtgccgaagatgtgattcacaaaatgaa
gacagatcagtttctagctctagctggaattgtggagtctcaactcttattacaaatgca
caaaagcccacaggaattgctgaggtatacagtaaattccgtccagtgaagcgagtttcc
ccactcaaacatcagccagagacgctagaaaacaatgaaagtgatgaccaaaagaaccat
aaagtggagtaccccaaagtgggtgagtctgaccagggcccccagcctgaggagctcggc
cctgaagatggagtgggaggcttgcccagtaagagctccgagtccagcactgcactgggc
gaactggaacattacgacctcgacatggatgagattctggatgtgccttacattaaatcc
agtcaacagcttgcctcttttaccaaggtgacttcagaaaaaagaattttgggtttatgc
acaaccatcaatggcctttctggcaaagcctcctctacaggaagcactgagaactcacca
tccagtatgaccccattctgtgttctttctcctgtgaaaagccctcacttgagaaaagca
tcaactgtcctccgcgaccagcacaagctctccactgaagagtctgagagctcacctcct
ctggttacatgtggctctgcatatgagccagaaagccagaataaagacttcttaaacaag
gcctttagtgacctgcatagccgaaagattgagaagacaatgccggactgtcagctccgg
ggcttccacctgcaatctgcagcaacagaatccaaactggaagagccggtcaaggtcatg
agctggaccagctcccaaggcccagaagaaaggaatgagtatctgaaaaaagtaaaaagc
atcttgaacatcgtgaaagaaggacaaatatctctcctgccacatctagctgcagacaat
ctagacaaaatccatgatgaaaatggaaacaacctgttacacatcgctgcatcgcaggga
cacgcagaatgtctccagcacctcacttctttgatgggggaagattgcctcaatgagcgg
aataccgagaaattgacaccagcaggcctggccatcaaggtgactggttgggggcttggc
tctcctcagctaaagtcagttttctatgttttcaaattccttgaagctaaagtattagac
gggagggaaagaagagtgatttatcaagcaaacagtaatgaacacatcacatgtcagaga
ttacccatctctatcactagctgctttgagattttgagactgcgttccaatttgttgtcc
aataagattaagctccaaaccctggtagagtatggagcaaacgtcaccatgcagaatcac
gctggggaaaagccctcccagagcgctgaacgtcaggggcacaccctgtgctcccggtac
ctggtggtggtcgagacctgcatgtcactagcctcacaggtggtaaagttaaccaagcag
ctaaaggaacagacaatggagcgtgtcacactgcagaaccaactccagcaacttctagaa
gcccagaaatcagagggcaagtctctcccttcctcacccagctcaccctcctcaccagct
tccagaaagtcccagtggaaatcttccgacgctgaagatgagtctacagccaaaagcaaa
ccaggagtccaagaagggattcaggtccttggaaacctgtcagcatccagccgagctagg
gccaaagcaaaagacgaagattctgataaaatcctgcgccagttattgggaaaagaaatc
tcagagaacgtttgtacccaagagaagctgtctttggaattccaggatgctcagacaacc
tctagaaacttgaaaaagattcctctagagaagagggaactcaagttagccaggctgagg
cagctgatgcagaggtcactgagtgagtctgacacagactccaacaactctgaggacccc
aaaaacacccctgtgcgaaaggctgacaggccccggccacagcccattgtggagagcgtg
gagagtatagacagcacagaaagcttacacctgatgataaagaagcactccttggcatca
ggacgcaggtttccttttagtaccaaggcctctaaatccctagagggccatagcccatct
cccacctcagagagcagcgaaccagacttggaaccccagtgtccagtctcggggaacact
cctccaagccagccctctggagagcccactcagtgcagccctgacagcactgcggcccag
aaggtcgccatgagtcccaagagcgccctcaagtctccctcttccaaacgccggacatct
cagaacttgaaactcagagttacctttgaggagcctgtggtgcagatggagcaaactaac
cttgaactgaatggagaaaaagacaaagataagggcaggaccctccagcggacccccaca
agtagtgaatcaggggaacaactgaaaaggccttttggaacctttcggtccatcatggag
acgctgagtggcaaccagaacaataacaacaactatcaggcagccacccagctgaagacc
tctacgttgcccttaacctcacttggaaggaagatgacagacgccaagggaaaccctgcg
agttctgctagcaaaggaaagaataaggcagagatgtacagcagctgcatccatctttcc
tctaacaggctgattgaagagcatctgcgtaactatgcacgacataatgacatcaataga
acaatgaagaaatcttacagcataaagcacattgatgagccagagtcaaaagaactcttt
ttgtaa
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