KEGG   Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101967780
Entry
101967780         CDS       T10664                                 
Symbol
Itgb1
Name
(RefSeq) integrin beta-1 isoform X1
  KO
K05719  integrin beta 1
Organism
iti  Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03271  Virion - Rotavirus
iti04015  Rap1 signaling pathway
iti04145  Phagosome
iti04151  PI3K-Akt signaling pathway
iti04360  Axon guidance
iti04510  Focal adhesion
iti04512  ECM-receptor interaction
iti04514  Cell adhesion molecules
iti04530  Tight junction
iti04611  Platelet activation
iti04670  Leukocyte transendothelial migration
iti04810  Regulation of actin cytoskeleton
iti04820  Cytoskeleton in muscle cells
iti05100  Bacterial invasion of epithelial cells
iti05133  Pertussis
iti05135  Yersinia infection
iti05140  Leishmaniasis
iti05145  Toxoplasmosis
iti05165  Human papillomavirus infection
iti05200  Pathways in cancer
iti05205  Proteoglycans in cancer
iti05222  Small cell lung cancer
iti05410  Hypertrophic cardiomyopathy
iti05412  Arrhythmogenic right ventricular cardiomyopathy
iti05414  Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:iti00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03271 Virion - Rotavirus
    101967780 (Itgb1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04015 Rap1 signaling pathway
    101967780 (Itgb1)
   04151 PI3K-Akt signaling pathway
    101967780 (Itgb1)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    101967780 (Itgb1)
   04514 Cell adhesion molecules
    101967780 (Itgb1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    101967780 (Itgb1)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    101967780 (Itgb1)
   04530 Tight junction
    101967780 (Itgb1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    101967780 (Itgb1)
   04810 Regulation of actin cytoskeleton
    101967780 (Itgb1)
 09150 Organismal Systems
  09151 Immune system
   04611 Platelet activation
    101967780 (Itgb1)
   04670 Leukocyte transendothelial migration
    101967780 (Itgb1)
  09158 Development and regeneration
   04360 Axon guidance
    101967780 (Itgb1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    101967780 (Itgb1)
   05205 Proteoglycans in cancer
    101967780 (Itgb1)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    101967780 (Itgb1)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    101967780 (Itgb1)
  09171 Infectious disease: bacterial
   05135 Yersinia infection
    101967780 (Itgb1)
   05133 Pertussis
    101967780 (Itgb1)
   05100 Bacterial invasion of epithelial cells
    101967780 (Itgb1)
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    101967780 (Itgb1)
   05140 Leishmaniasis
    101967780 (Itgb1)
  09166 Cardiovascular disease
   05410 Hypertrophic cardiomyopathy
    101967780 (Itgb1)
   05412 Arrhythmogenic right ventricular cardiomyopathy
    101967780 (Itgb1)
   05414 Dilated cardiomyopathy
    101967780 (Itgb1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:iti04131]
    101967780 (Itgb1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:iti04147]
    101967780 (Itgb1)
   04515 Cell adhesion molecules [BR:iti04515]
    101967780 (Itgb1)
   04090 CD molecules [BR:iti04090]
    101967780 (Itgb1)
Membrane trafficking [BR:iti04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    101967780 (Itgb1)
Exosome [BR:iti04147]
 Exosomal proteins
  Proteins found in most exosomes
   101967780 (Itgb1)
Cell adhesion molecules [BR:iti04515]
 Integrins
  Integrin beta subunits
   101967780 (Itgb1)
CD molecules [BR:iti04090]
 Proteins
  101967780 (Itgb1)
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail Integrin_b_cyt EGF_integrin PSI_integrin I-EGF_1 EGF_2 vWA_SIBA-E
Other DBs
NCBI-GeneID: 101967780
NCBI-ProteinID: XP_005330879
LinkDB
Position
Unknown
AA seq 801 aa
MNLQLVFWIGLISSVCCVFGQTDKNRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPT
SARCDDLEALKKKGCHPDDIENPRGSKTIKKNKNVTNRSKGTAEKLQPEDITQIQPQQLV
LQLRSGEPQMFTLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDF
RIGFGSFVEKTVMPYISTTPAKLRNPCTSEQNCTSPFSYKNVLSLTDKGEIFNELVGKQR
ISGNLDSPEGGFDAIMQVAVCGSSIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQ
CHLENNVYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTL
SANSSNVIQLIIDAYNSLSSEVILENSKLPEGVTINYKSYCKNGVNGTGENGRKCSNISI
GDEVQFEISITANKCPNKKSETIKIKPLGFTEEVEIILEFICECECQNEGIPKSPKCHEG
NGTFECGACRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRK
RDNTNEIYSGKFCECDNFNCDRSNGLICGGNGVCRCRVCECYPNYTGSACDCSLDTTPCM
AVNGQICNGRGICECGVCKCTDPKFQGQTCETCQTCLGVCAEHKECVQCRAFNKGEKKDR
CAQECSHFNLTKVESRDKLPQPVQVDPLSHCKEKDVDDCWFYFTYSVNGNNEAIVHVVET
PDCPTGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTQEN
PIYKSPINNFKNPNYGRKAGL
NT seq 2406 nt   +upstreamnt  +downstreamnt
atgaatttacaactggttttctggattggactgatcagttcagtatgctgcgtgtttggt
caaacagataaaaatagatgtttgaaagcaaatgccaaatcatgtggagaatgtatacaa
gctgggccaaattgtgggtggtgcacaaattcaacatttttacaagaaggaatgcctact
tctgcacgatgtgatgatttagaagccttaaaaaagaagggttgccatccagatgacata
gaaaatcccagaggctccaaaactataaagaaaaataaaaatgtaacaaaccggagcaaa
ggaacagcagagaagctccagccagaagatattactcagatccagccacagcagttggtt
ttgcaattgcgatcaggagagccacagatgtttacattaaaattcaagagagctgaagac
tatcccattgatctttattaccttatggacctctcttattcaatgaaagatgatttggag
aatgtaaaaagtcttggaacagatctgatgaatgaaatgaggaggattacttcagacttc
cgaattggatttggctcatttgtggagaaaactgtgatgccttacattagtacaacacca
gcgaagctcaggaacccttgtacaagtgaacagaactgtaccagtccatttagctacaaa
aatgtactcagtcttactgataaaggggaaatatttaatgaacttgtgggtaaacaacgt
atatctggaaatttggattctccagaaggtggttttgatgcaatcatgcaagttgcagtt
tgtggatcatcaattggctggaggaatgttacacggctactggtattttccacggatgct
ggatttcactttgctggagatgggaaacttggtggcattgttttaccaaatgatggacag
tgtcacctagaaaataatgtgtacacaatgagccattattatgattatccctctattgct
caccttgtccagaaactcagtgaaaataatattcagacgatttttgcagtgactgaagaa
tttcagcctgtttacaaggaactgaaaaatttgatccctaagtcagcagtcggaacattg
tctgcaaattctagcaatgtgatacagttgatcattgatgcttacaattccctttcctca
gaagtcattttggaaaacagcaagttgccagaaggagtaacaataaattacaaatcctac
tgcaagaatggggtgaatggaactggggaaaatgggcgaaaatgttccaatatttccatt
ggagatgaggttcaatttgaaattagcataactgcaaataaatgtccaaataagaaatct
gaaaccattaaaattaagcctctgggcttcactgaggaagtagagattattcttgagttc
atctgtgaatgtgaatgccaaaatgaaggtatccctaaaagtccaaagtgtcatgaagga
aatggaacatttgagtgtggagcttgtaggtgcaacgagggacgtgttggtagacattgt
gaatgtagtacagatgaagttaacagtgaggacatggatgcatactgcaggaaagaaaac
agttcagaaatctgtagtaacaatggagagtgcgtctgtggacagtgtgtttgtaggaag
agggataatacaaatgaaatttattctggcaaattctgcgagtgtgataatttcaactgt
gatagatccaatggcttaatttgtggaggcaatggtgtttgcaggtgtcgtgtgtgtgaa
tgctaccccaactacactggcagtgcgtgtgactgttctttggatactacgccatgtatg
gccgtaaatggacagatctgcaatggccggggcatctgtgagtgtggtgtctgtaaatgt
acagatccaaagtttcaaggacaaacttgcgaaacatgtcagacctgccttggcgtctgt
gctgagcataaagaatgtgttcagtgcagagcattcaacaaaggagaaaagaaagacaga
tgtgcacaagaatgttcacatttcaacctgaccaaggtagaaagtcgggacaaattacct
cagccagtacaggttgatcccctgtcccactgtaaggagaaggatgttgatgactgctgg
ttctacttcacatattcagtgaatgggaacaatgaagccattgttcatgttgtggagact
ccagactgtcccactggtccagacatcattccaattgtagctggtgtggttgctggaatt
gttctcattggccttgcattactgctgatttggaagcttttaatgataattcatgacaga
agggaatttgctaaattcgaaaaggagaaaatgaatgccaagtgggacacgcaagaaaat
ccgatttacaagagtcctattaataatttcaagaatccaaactatggacgtaaagctggt
ctctaa

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