Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101968002
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Entry
101968002 CDS
T10664
Symbol
Lamc1
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04151
PI3K-Akt signaling pathway
iti04510
Focal adhesion
iti04512
ECM-receptor interaction
iti05020
Prion disease
iti05145
Toxoplasmosis
iti05146
Amoebiasis
iti05165
Human papillomavirus infection
iti05200
Pathways in cancer
iti05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
101968002 (Lamc1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101968002 (Lamc1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101968002 (Lamc1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101968002 (Lamc1)
09162 Cancer: specific types
05222 Small cell lung cancer
101968002 (Lamc1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
101968002 (Lamc1)
09174 Infectious disease: parasitic
05146 Amoebiasis
101968002 (Lamc1)
05145 Toxoplasmosis
101968002 (Lamc1)
09164 Neurodegenerative disease
05020 Prion disease
101968002 (Lamc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
Laminin_B
EGF_Teneurin
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
101968002
NCBI-ProteinID:
XP_005319772
UniProt:
I3MCM1
LinkDB
All DBs
Position
Unknown
AA seq
1608 aa
AA seq
DB search
MRGSERAALASRRRGRLWTVLAVLAAAAAGCAGAAMDECTDEGGRPQRCMPEFVNAAFNV
TVVATNTCGTPPEEYCVQTGVTGVTKSCHLCDAGQPHLQHGAAFLTDYNNQADTTWWQSQ
TMLAGVQYPNSINLTLHLGKAFDITYVRLKFHTSRPESFAIYKRTREDGPWIPYQYYSGS
CENTYLKASRGFIRTGGDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQ
EWVTATDIRVTLNRLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKNEFD
KLVCNCKHNTYGVDCEKCLPFFNDRPWRRATAESASECLPCDCSGRSQECYFDPELYRST
GHGGHCTNCRDNTDGAHCERCRENFFRLGNNEACSPCHCSPVGSLSTQCDSYGRCSCKPG
VMGDKCDRCQPGFHSLTEAGCRPCSCNPSGSIDECNVETGRCVCKDNVEGFNCERCKPGF
FNLEPSNPKGCTPCFCFGHSSVCTNAIGYSVYSISSTFHIDEDGWRVEQRDGSEASLEWS
SERQDIAVISDSYFPRYFIAPAKFLGNQVLSYGQNLSFSFRVDRRDTRLSAEDLVLEGAG
LRVSVPLIAQGNSYPSETTVKYIFRLHEATDYPWRPALSPFEFQKLLNNLTSIKIRGTYS
ERSAGYLDDVTLASARPGPGVPATWVETCTCPVGYGGQFCEMCLPGYRRETPSLGPYSPC
VLCTCNGHSETCDPETGVCNCRDNTAGPHCEKCSDGYYGDSTVGTSSDCQPCPCPGGSSC
AVVPKTKEVVCTNCPTGTTGKRCELCDDGYFGDPLGRNGPVRLCRLCQCNDNIDPNAVGN
CNRSTGECLKCIYNTAGFYCDRCKDGFFGNPLAPNPADKCKACSCNPYGTVRQQSSCNPV
TGQCECLPHVSGRDCGTCDPGFYNLQSGQGCERCNCHALGSTNGQCDIRTGQCECQPGIT
GQHCERCEVNHFGFGPEGCKPCDCHPEGSRSLQCKDDGRCECREGFVGNRCDQCEENYFY
NRSWPGCQECPACYRLVKDKVADHRVKLQELESLIANLGTGDEMVTDQAFEDRLKEAERE
VMDLLREAQDVKDVDQNLMDRLQRVNNTLHSQIGRLQNIRNTIQETGNLAEQARARVEST
ERLIEIASRELEKAKIAAANVSIIQPESTGDPNNMTLLAEEARKLAERHKQEADDIVRVA
KTANDTSTEAYNLLLRTLAGENQTAVEIEELNRKYEQAKNISQDLEKQAARVHEEAKRAG
DKAVEIYASVAQLAPVDSEALENEANKIKKEAADLERLIDQKLKDYEDLREDMRGKELEV
KNLLENGKIEQQTADQLLARADAAKALAEEAAKKGRNTLQEANDILNNLKDFDRRVNDNK
TAAEEALRRIPAINQTIAEANEKTREAQLALGNAAADATEAKNKAHEAERIASAVQQNAT
STKAEAERTFAEVTDLDNEVNGMLRQLQEAERELKRKQDDADQDMMMAGMASQAAQEAEI
NARKAKNSVNSLLNMINDLLEQLGQLDTVDLNKLNEIEGTLNKAKDEMKASDLDRKVSDL
ENEARKQEAAIMDYTRDIEEILKDIHNLEDIKKTLPSGCFNTPSIEKP
NT seq
4827 nt
NT seq
+upstream
nt +downstream
nt
atgaggggcagcgagcgggccgcgctggcctcgcggcgccgggggcggctctggacggtg
ttggctgtgctggcggcagccgcggcgggctgtgccggggcagccatggacgagtgcacg
gacgagggcgggcggccgcagcgctgcatgcctgagttcgtcaacgccgccttcaacgtg
accgtggtggccaccaacacgtgtgggactccgcccgaggagtactgtgtgcagaccggg
gtgaccggggtcaccaagtcctgtcacctgtgcgacgccgggcagccccacctgcagcac
ggggcagccttcctgaccgactacaacaaccaggccgacaccacctggtggcaaagccag
accatgctggccggggtccagtaccccaactccatcaacctcacgctgcacctggggaaa
gcttttgatatcacctacgtgcgcctcaagttccataccagccgccctgagagtttcgcc
atctacaagcgcacgcgggaggatgggccctggatcccctaccagtactacagtggctcc
tgcgagaacacctacctgaaggccagccgtggctttatcaggacaggaggggatgagcag
caggccttgtgtaccgatgagttcagtgacatttctcccctcaccggaggcaacgtggcc
ttctcgaccctggagggcaggcccagtgcctacaactttgacaatagtcctgtgctgcag
gagtgggtaacagctactgacatcagagtgactctcaatcgcctgaacacttttggagat
gaagtgtttaatgaccccaaagttctcaagtcctattattatgcaatctctgattttgct
gtgggtggcaggtgtaaatgtaacggacatgccagcgagtgtgtgaagaatgaatttgac
aagctggtgtgtaattgcaaacataacacgtatggagtggactgtgaaaagtgcctgcct
ttcttcaatgaccggccgtggaggagggcaactgctgaaagtgccagcgagtgcctgccc
tgtgactgtagtggccgatcgcaggaatgctactttgaccctgagctctaccgttccacg
ggccatggcggccattgtaccaattgccgggataacactgatggtgcccactgtgagagg
tgccgagagaacttcttccgcctggggaacaatgaagcctgctctccatgtcactgcagt
cctgttggttctctcagcacacaatgtgatagttacggcagatgcagctgtaagccagga
gtgatgggtgacaagtgtgaccgatgccagcctggattccattctctcacggaggcagga
tgcaggccgtgctcctgtaatccttctggcagcatagatgaatgtaacgtggaaacagga
aggtgtgtttgcaaagacaacgtggaaggcttcaactgtgagagatgcaaacctggattt
tttaatctggaaccatctaatcctaagggttgcaccccctgcttctgctttgggcactct
tctgtctgtacaaatgcaatcggctacagtgtttattctatatcctctacctttcacatt
gatgaggacgggtggcgcgtggagcagagggatggctctgaagcatctctcgagtggtcc
tctgagaggcaagatatcgccgtgatctcagatagctactttcctagatacttcattgcc
cctgcaaagttcttgggcaaccaggtcttgagttatggtcagaacctctccttctccttc
cgggtggacagacgagacactcgcctctctgcagaagacctggtgctggagggagccggc
ttgagagtgtccgtgccattgatcgctcagggcaattcctacccaagtgagaccactgtg
aagtacatcttcaggctccatgaagcaacagattacccctggaggcctgctctttcccct
tttgaatttcagaagctactaaacaacttgacttctatcaagatccgtgggacatacagt
gagagaagtgctggatatctggatgatgtcaccctggcaagtgctcgtcctgggcctggg
gtccctgcaacttgggtggagacctgcacctgtccagtgggttatggagggcagttctgt
gagatgtgtctcccgggttacagaagagaaactccgagtctcggaccatacagtccctgt
gtgctttgtacctgcaatggacacagtgagacctgtgaccctgagacaggtgtctgtaac
tgcagagacaatactgctggcccccactgtgagaagtgtagtgatgggtactacggagat
tcgactgtgggcacgtcttctgactgccaaccttgtccatgtcctgggggctcaagttgt
gctgttgttcccaagacaaaggaggtagtgtgcaccaactgtccgactggtaccacgggt
aagagatgtgagctctgtgatgatggctactttggagaccccttgggtagaaatggccct
gtaaggctttgccgcctctgccagtgtaatgacaacattgatcccaatgctgtgggaaat
tgcaaccgctcgacaggagagtgcctgaaatgcatctataacactgcgggcttctattgt
gaccggtgcaaagatggattctttggaaatcccctggctcccaatccagcagacaaatgc
aaagcttgcagttgcaatccatatggcactgtgaggcagcagagcagctgtaatcctgtg
accggtcagtgtgagtgtctgcctcatgtgtccggccgggactgtggtacttgtgaccct
ggcttctacaacctacagagtggacaaggctgtgagaggtgcaattgccatgctttgggt
tccaccaacggacagtgtgacatccgcaccggccagtgtgaatgccagccgggcatcact
ggtcagcactgtgagcgctgtgaggtcaaccactttgggtttggacctgaaggctgcaaa
ccttgtgactgtcatcctgaggggtctcgttcactccagtgcaaagatgatggtcgctgt
gaatgcagagaaggctttgtgggaaaccgctgtgaccagtgcgaagagaactatttctac
aatcgttcctggcctggctgccaggaatgtccagcttgttaccggctggtgaaggataag
gttgctgatcatcgagtgaaactccaggaattagagagtctcatagcaaaccttggaact
ggggatgagatggtgacagatcaagcctttgaggataggctaaaggaagcagagagagag
gttatggacctccttcgtgaggcccaggatgtcaaagatgtggaccagaacttgatggat
cgccttcagagggtgaataacactctgcatagccaaatcggccgtttgcagaacatccgg
aacaccatccaggagactggaaatttggctgaacaagcacgggcccgagtggagagcacg
gagcggctgattgaaattgcctccagagaacttgagaaagcaaaaattgcagctgccaat
gtgtcaatcattcagccggagtctacaggggatccaaacaacatgactcttctggcagaa
gaggcccgaaagctggctgaacgccataaacaagaagctgatgacattgtacgagtagca
aaaacagccaatgatacatcaactgaggcatataatctgcttttgagaacactggcagga
gaaaatcagacagcagtcgagattgaagagcttaataggaagtatgaacaagcaaagaac
atctcacaggatctagaaaagcaagcagcccgagtccatgaggaggccaagcgtgctgga
gacaaagctgtggagatctacgccagtgtggctcagctagctcccgtggactcagaggct
ctggagaatgaagcaaataaaataaagaaagaagctgcagacctggaacgtctgattgac
cagaagttaaaggattatgaagacctcagagaagacatgagagggaaggagcttgaagta
aaaaaccttctggagaatggaaaaattgaacagcagactgccgatcaactcctggcccga
gcggatgctgccaaggctcttgctgaagaagctgctaaaaaaggacgaaataccttacaa
gaagccaatgacattctcaacaacctgaaagattttgatagacgcgtgaatgataacaag
acagctgcagaggaggcactgaggaggattcccgccatcaaccagaccatcgcggaagcc
aatgagaagacgagggaagcacagctggcgttgggcaatgcagcagcagatgccaccgag
gccaagaacaaggcccacgaggctgagagaatcgccagcgccgtccagcagaatgctacc
agcaccaaggcagaagctgaaaggacttttgcagaagttacagatctggataacgaggtg
aacggtatgttgaggcagctacaggaagcagagagagagctgaagagaaaacaagatgat
gccgaccaggacatgatgatggcagggatggcttcccaggctgctcaggaagctgagatc
aatgccagaaaggccaaaaactcagtgaacagcctcctcaacatgatcaacgacctcttg
gagcaactgggtcagctggacacagtggacctgaacaagctcaatgagattgaaggtacc
ctgaacaaagccaaagacgaaatgaaggccagtgaccttgacaggaaagtgtccgacctg
gagaatgaagccaggaagcaggaggctgccatcatggactacacccgtgatatcgaggaa
atcttgaaggacatccacaacctggaggatatcaagaagaccttaccgtccggctgcttc
aacaccccgtccatcgagaagccctag
DBGET
integrated database retrieval system
