Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101968071
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Entry
101968071 CDS
T10664
Symbol
Smc1b
Name
(RefSeq) structural maintenance of chromosomes protein 1B isoform X1
KO
K06636
structural maintenance of chromosome 1
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04110
Cell cycle
iti04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
101968071 (Smc1b)
04114 Oocyte meiosis
101968071 (Smc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
iti03036
]
101968071 (Smc1b)
Chromosome and associated proteins [BR:
iti03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
101968071 (Smc1b)
Meiosis-specific proteins
Cohesin complex and associated proteins
101968071 (Smc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_15
AAA_21
AAA_29
RusA
Ca_chan_IQ
Motif
Other DBs
NCBI-GeneID:
101968071
NCBI-ProteinID:
XP_021588681
LinkDB
All DBs
Position
Unknown
AA seq
1239 aa
AA seq
DB search
MGRLDVLLVENFKSWRGRQVIGPFRRFTCIIGPNGSGKSNVMDALSFVMGEKTANLRVKN
IQELIHGAHIGKPVSSSASVKIVYVEESGEEKTFARIIRGGCSEFHFDDNPVSRSAYIAE
LEKIGIIVKARNCLVFQGTVESISMKKPKERTQFFEEISTSGELIGEYEEKKRRLQKAEE
DAQFNFNKKKNVAAERKHAKLEKEEAERYQSLLEELKINKIQLQLFQLYHNEKKIHFLNT
ELEHVNRDLSVIKESLSHHENIVKAKKKEHGMLTRQLQQTEKELKSLEALLNQKRPQYIK
AKENTSHHLKKLDVSKKSIKDSERQCSKQEDDIRALETELVDLDSAWRNFEKQIEEEILH
KGRDIELEASQLDLYKELKEQVRKKVAIMTQQLEKLQWEQKAEKERLAFEKRRHGEVQGN
LKQIKEQIEDHKKRIEKLEEYTKTCMDCLKEKKQQEENLVDEIGKTKSRMSEVNEELNLI
RSELQNAGIDTHEGRRQQKRAEVLEHLKRLYPDSVFGRLLDLCHPIHKKYQLAVTKLFGR
YMVAIVVVSEKVARDCIRFLKEERAEPETFLALDYLDIKPINERLREIKGCKMMIDVIKT
QFPQLKKVIQFVCGNGLVCETVEEARHVAFGGPERRKTVALDGTLFLKSGVISGGSSDLK
HKARCWDEKELKSLRDRRSQLVQELKDLMKILRKETDLKQIQTLAQGTHTRLKYSQSELE
MIKKKHLAAFYREQSQLQSELLNIESQCTMLSEGIKEQQQRIEEFQERIDKVEDDIFQHF
CEEIGVANIREFENKHVKQQQEIDQKRLEFEKQKTRLNIQLEYSRNQLKKKLNKINALKE
IIQKGREDIDNLKKVEEDCLQVVDELMAKRQQLQDIFVTQNSNTEKVQTQIEEERKKFFA
VDREVGKLQKEVVIIQTSLEQKRLEKHNMLLDCKVQDIEIVLLLGSLDDIIEVELGTEAE
STQTTTDIYEKEATIEVDYSPLREDLKALQSDKEIEAQLALLLQQMASQEDVLLKTAAPN
LRALENLKTVRDKFQESTDAFEASRKEARMCRQEFEQVKKRRYDLFSQCFEHVSISIDQI
YKKLCRNNSAQAFLSPENPEEPYLEGISYNCVAPGKRFMPMDNLSGGEKCVAALALLFAV
HSFRPAPFFVLDEVDAALDNTNIGKVSSYIKEQTQEQFQMIIISLKEELYSRADALIGIY
PEHEECMFSRVLTLDLSQYPDTEGREGSRRHRESQPVRS
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcctggatgtgctgctcgtggagaacttcaagtcgtggcggggccgccaggtc
attggccccttcagaaggttcacctgcatcatcggccccaacggctcgggaaaatctaat
gtaatggatgcacttagttttgtaatgggagagaaaacggctaatttaagagtgaaaaat
attcaagaacttattcatggagcacatattggaaaaccagtttcttcttctgcaagtgta
aagattgtatatgtggaagaaagtggagaagagaagacatttgcaagaatcattcgaggg
ggatgttctgaatttcattttgatgataaccctgtgagtcgttctgcttacatagcagag
ttggaaaagataggcataatagtcaaagcacggaactgtctggttttccagggaactgta
gagtctatttccatgaaaaaacccaaagaaagaacccaattttttgaagaaatcagcact
tcaggagagcttataggagaatatgaggaaaagaaaagaaggttacaaaaagctgaagaa
gatgcacaatttaattttaataagaaaaaaaatgtagctgcagagcgcaagcatgcaaaa
ttagagaaagaagaggcagaacgttatcaaagtctccttgaagaactgaaaataaacaag
atacaactgcagctttttcaactttatcataatgagaaaaaaattcattttctgaacact
gagttagagcatgtgaatagggatttgagtgtcataaaagagtctctttctcatcatgaa
aacatagttaaagccaagaaaaaggaacatggaatgctaactagacaactacaacaaaca
gaaaaagaattgaagtctcttgaagcacttttaaatcagaagaggcctcagtacattaaa
gccaaagaaaacacttctcatcacctcaagaaattggatgtgtctaagaaatcaataaag
gacagtgagagacagtgttccaaacaggaagatgatataagagccctagagacagaactg
gttgatttagatagtgcttggagaaattttgaaaagcagattgaggaagaaatcttacat
aaaggacgagacattgaactggaagctagtcagctggatctttataaagaacttaaggaa
caagtaaggaagaaagtagctataatgactcaacaactggaaaagctgcagtgggaacag
aaggcagagaaagaaagactggcttttgaaaagaggagacatggagaagttcagggaaat
ctaaaacaaataaaagaacaaatagaagatcataaaaaacgaatagagaagttggaggag
tatacaaagacatgcatggattgcctaaaagagaagaaacagcaagaggaaaaccttgtg
gatgaaattggaaaaacaaaatcaagaatgtctgaagttaatgaagagctgaatcttatt
agaagtgaattgcagaatgctggaattgatacccatgagggaagacgtcagcaaaagaga
gcagaagttctggagcaccttaaaagactttacccagattccgtgtttggaagactgctt
gacctgtgtcatcctattcataagaaataccagctggctgtgactaagctttttggccgg
tacatggttgccattgttgtagtgtctgaaaaggtagcaagagattgtattcgatttctg
aaggaggaaagagccgaacctgagacgttccttgctctagattatcttgatatcaagcca
atcaatgaaagactaagagagatcaaaggctgtaaaatgatgattgatgtcataaaaact
cagtttcctcagctgaagaaggtgattcagtttgtgtgtggaaatggccttgtgtgcgag
actgtggaagaagcaagacatgttgcgttcggtggacctgaaaggcgaaaaacagtagct
cttgatggaacactgtttttaaaatctggggtgatctctggaggatcaagtgacttaaaa
cacaaggctagatgctgggatgagaaagagttaaagagtctacgagacagaagaagccag
ttggtccaagaactaaaggatttaatgaagatactccgcaaggaaacagatttaaagcaa
atacagactctagcacaaggaactcatacacgactcaaatattcacaaagtgaactagaa
atgattaagaagaaacaccttgctgctttttatcgggaacaatctcagctacaaagtgaa
ctattaaatattgagtctcaatgtactatgttgagtgagggaatcaaagaacaacagcaa
cgaattgaagaatttcaagaaagaatagataaggtagaagatgacattttccaacacttc
tgtgaagaaattggtgtggcaaatattcgtgaatttgagaataaacatgttaaacagcaa
caagaaattgatcaaaaaagattagaatttgaaaagcaaaaaactcggcttaatattcag
cttgaatatagtcgcaatcagcttaagaagaaactgaataagatcaacgcattaaaagaa
attatccagaaaggtagagaagacattgataatctgaagaaggttgaagaagactgtctg
caagttgtggatgaactcatggcaaagcggcagcaacttcaggacatctttgtcactcag
aattccaacactgagaaagttcaaactcagattgaagaggaacggaagaagtttttcgct
gttgatagggaagtgggaaaattgcaaaaggaagttgtgatcattcagacttctctggaa
cagaaacgattagagaagcataacatgctgcttgattgtaaagttcaagacattgagata
gttcttctgttggggtcactggacgacataattgaagtagagctggggactgaagcagaa
agtacccagacgacaactgacatctatgaaaaggaagccacaattgaagtggactatagc
cctttaagagaggatctcaaggctctgcagtcagataaagagatagaggcccaacttgca
ctcctcttgcagcagatggcctcccaggaggatgttctgttgaagacagcagccccaaac
ctgagagccctagagaacctcaagactgtcagagacaagtttcaggaatccacagatgct
tttgaggccagcagaaaggaagccagaatgtgtaggcaagagtttgaacaggtgaaaaaa
aggagatacgatcttttcagccagtgttttgagcacgtctcaatctcaattgatcaaatc
tacaagaagctctgcagaaacaacagtgcccaagcatttcttagcccagagaaccctgaa
gaaccctatttggagggaattagttataattgtgtggccccaggcaaacgatttatgcca
atggacaatttgtcagggggagaaaagtgtgtggcagctttggctctcctgtttgctgta
cacagttttcggcctgctccattctttgtcttagatgaagtagatgcagccctggataac
accaacatcggcaaagtatcaagttacatcaaagaacagactcaagaacaatttcagatg
ataatcatttccctaaaagaagagttgtattccagagctgatgctctgatcggcatctat
ccagagcatgaagagtgcatgttcagccgagtgttgaccctcgatctctctcagtatcct
gacactgaaggccgggaaggtagccggagacaccgtgagtcccagccagtgagaagctag
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