Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101968134
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Entry
101968134 CDS
T10664
Symbol
Nphp3
Name
(RefSeq) nephrocystin-3 isoform X1
KO
K19360
nephrocystin-3
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
Cilium and associated proteins [BR:
iti03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
101968134 (Nphp3)
BRITE hierarchy
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
101968134
NCBI-ProteinID:
XP_021583220
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Position
Unknown
AA seq
1219 aa
AA seq
DB search
MGRREAKLDTENKRLRAELQALQKTYQKILREKESALEAKYQAMERAATFEHDRDKVKRQ
FKIFRETKENEIQDLLRAKRELESKLQRLQAQGIQVFDPGESDSDDNCTDITAAGTQCEY
WSGGALGSEPSIGSLIQLQQSFRGPEFAHSSIDVEGPFANVNRDDWDVAVASLLQVTPLF
SHSLWSNTVRCYLMYTEETQPEMDLFLKDYSPKLKRMCETMGYFFHAVYFPIDVENQYLT
IRKWEIEKSSLVILFIHSTLPSLLLEDCEEAFLKNPEGKPRLIYHRLEDGKVSSDSVQLL
IDQVSNLNKANKAKFIDHSGDPAEGVYKTYICVEKIIKQDILGFENTDLETKDLGSDDSL
PEEDDFGDVLWDIHDEQEQMETFQQASNSAHELGFEKYYQRLNDLVAAPAPIPPLLVSGG
PGSGKSLLLSKWIQLQQKNSPNTLILSHFVGRPMSTSSESSLIIKRLTLKLMQHSWSVSA
LTLDPAKLLEEFPRWLEKLSARHQGSIIIVIDSIDQVQQVEKHMKWLIDPLPVNVRVIVS
VNVETCPAAWRLWPTLHLDPLNPKDAKSIIIAECHSVDIKLSKEQEKKLERHCRSATTCN
ALYITLFGKMMARAGRAGGVDKILHECLQCQDTVSLYRLVLRSIKESMTDDTDKELMRQI
LCLVNVSHNGVSESELMELYPEMSWAVLTSLIHSLHKMCLLTYGCGLLRFQHLQAWETVR
LEYMDGPATISSYRQKLISFFTSQLSQDRVTWRIADELPWLLQQQGSKQKLHGCLLNLFV
SQNLYKRGHFAELLSYWQYVGKDKSAMATEYFDSLKQYEKNCEGEENMICLADLYETLGR
FLKDLGLLSQAVVPLQRSLEIRETALDPDHPRVAQSLHQLASVYVQWKKFGNAEQLYKQA
LEISENAYGADHPHTARELEALATLYQKQNKYEQAEHFRKKSFKIRQKATRRKGNLYGFA
LLRRRALQLEELTLGKDTPDNARTLNELGVLYYLQNNLETADQFLKRSLEMRERVLGPDH
PDCAQSLNNLAALCNEKKQYEKAEELYERALDIRKRALAPDHPSLAYTVKHLAILYKKTG
KLDKAVPLYELAVEIRQKSFGPKHPSVATALVNLAVLYCQMKKHIEALPLYERALKIYED
SLGRMHPRVGETLKNLAVLSYEEGDFEKAAELYKRAMEIKEAETSLLGGKAPSRHSSSGD
TFSLKTTHSPNVFLPRGQR
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgggccgccgcgaggccaagctggacaccgagaacaagcggctgcgggccgagctgcag
gcactccagaaaacttatcagaagatacttcgagaaaaagaaagtgctttagaagcaaaa
taccaagcaatggagagagcagctacatttgaacatgacagagataaagttaagcggcag
ttcaagatttttagagagaccaaagaaaatgaaattcaggacttattgagggccaagcga
gagctggagagcaaacttcagaggctacaggctcaggggatccaagtatttgatcctggg
gagtctgattcagatgacaactgtacagatattactgctgctggaacccagtgtgaatac
tggagtggtggggccttgggcagtgagccctccatagggagcttgatccagcttcaacag
tccttcagagggccggagttcgcccacagttccatagacgtggagggaccctttgcaaat
gtcaacagagatgactgggatgtcgccgtagctagtttattacaggtgactcccttgttt
tcacattctctatggagtaacactgtcagatgttacctcatgtacacagaagaaacccag
cctgaaatggatcttttcctgaaggactattcacctaaacttaaaagaatgtgcgagaca
atgggatattttttccatgctgtttattttccaatagacgttgaaaatcaatacctcact
ataagaaaatgggaaattgagaagagttccttagttattttattcattcactccacttta
ccaagccttttattggaagactgtgaagaagcctttctgaaaaaccctgaaggaaaacct
cggttaatttatcaccgtctggaggatgggaaagtcagttctgactctgtccagcttttg
attgatcaagtttctaacctcaacaaggccaacaaagccaagttcattgatcactcagga
gatcctgcagagggagtatataaaacttatatttgtgtggaaaagatcattaagcaggat
atactgggctttgagaacacagacctggagactaaggatttgggaagtgatgattccctt
ccagaagaagatgattttggagatgttctgtgggacatacacgatgaacaagagcaaatg
gaaacctttcagcaggcttctaattcagcccatgagttaggatttgagaaatattaccaa
cgcctcaatgatctggtggcagcaccagccccgattccaccccttctggtgtctggagga
ccaggttctggaaagtcccttcttttatcaaagtggattcaattgcagcagaagaattcc
cccaacacgctgatcctttctcattttgtggggaggcccatgtccaccagttcagagtcc
tccttgattattaaacgcctgacgttaaagttgatgcagcactcttggtctgtgtcagcg
ctaactttggatcctgctaagctcctggaagaatttccacgttggctagagaaactctcc
gctcgtcatcagggaagcatcatcatcgttattgattccatagatcaagttcagcaagtt
gagaaacacatgaaatggctgatagacccactgccagtgaacgtaagagtcatagtttct
gtaaatgtggaaacttgccctgcagcatggaggttgtggcctacacttcatcttgatcct
ttaaatccaaaagatgcaaaatctattataattgcagaatgccactctgtagacattaaa
ctgagcaaagagcaggagaagaaattagaacgacattgtcgttctgctacgacttgcaat
gccctttacatcaccctttttggcaaaatgatggcacgtgctgggagagcaggtggtgta
gataagatccttcatgagtgtctccagtgccaggacactgtttcgttgtacaggctggtt
ctgcgctccatcaaggagtccatgacagacgacacggacaaagagctaatgagacagatt
ctctgccttgtcaatgttagtcacaatggcgtgagtgaatcagaattgatggaactctat
cctgagatgtcctgggctgtcttgacctcccttattcacagtttacacaaaatgtgtttg
ttgacatatggttgtggcttgctcaggtttcaacatctccaagcctgggaaacagtgaga
ctggagtacatggacggtcctgctaccatttcttcatataggcaaaagctaattagcttt
ttcacctcacagctaagccaggacagagtgacctggaggattgcagatgagctcccttgg
cttttgcagcagcagggaagtaaacagaagctgcatggttgcctcctcaacctcttcgta
tctcagaacctttacaaaagaggacactttgctgagttgctgagttactggcagtatgtt
ggcaaagacaagagcgcaatggcaacagaatactttgactcgttgaagcaatacgagaaa
aactgcgaaggagaggagaacatgatttgcctagcagatctctatgaaaccctggggcga
tttctcaaggatcttggccttctcagtcaggctgtggtgcctttgcagaggtctctggaa
attcgagagacagctttagatccggatcacccaagagtagcccagtccctccaccaactg
gcaagtgtgtacgtgcaatggaagaagtttggcaatgcagagcaactgtataaacaggct
ttggaaatctcagaaaatgcttatggtgcagatcatcctcacactgctcgtgaactggag
gcacttgcaactttgtaccagaagcaaaacaaatatgaacaagctgaacattttaggaaa
aaatcctttaagattcgtcagaaagctacaaggagaaaaggcaacttgtatggatttgcc
cttctacgcagacgggccctgcagttagaagagcttaccttaggtaaggacacgcctgat
aatgcccggaccctcaatgaactgggtgttctctactatcttcaaaataacctggaaacc
gctgaccagtttctgaagcgttccttagaaatgagggagcgagttctaggaccagatcac
ccagactgtgcccagtctctgaataatctggcagctctgtgcaatgaaaagaaacagtat
gaaaaagcagaagagctttatgaaagagctttagatattcggaaacgagccttggctcca
gatcacccttctttggcgtatacagtgaagcaccttgcaatcttgtataagaaaacaggg
aaacttgacaaagccgtacctttgtatgagttggctgttgaaattcggcagaaatccttt
ggcccaaagcaccctagcgtagcaacagccttggtgaacttagcagttctttattgtcaa
atgaaaaaacacattgaagctttgccattatatgaaagagcattaaagatttatgaagat
agcctgggtcggatgcatcctcgagttggagaaacattaaaaaacttagctgtgcttagc
tacgaagaaggagattttgaaaaagctgctgaactgtacaaaagggccatggagataaaa
gaagcagaaacatcacttttggggggcaaagctccttcaagacattcatcaagtggagac
acgttcagcttaaaaaccactcattctcctaatgttttccttcctcgaggacaaaggtga
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integrated database retrieval system
