Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101968282
Help
Entry
101968282 CDS
T10664
Symbol
Hmgcl
Name
(RefSeq) hydroxymethylglutaryl-CoA lyase, mitochondrial isoform X1
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti00280
Valine, leucine and isoleucine degradation
iti00650
Butanoate metabolism
iti01100
Metabolic pathways
iti04146
Peroxisome
Module
iti_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
101968282 (Hmgcl)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
101968282 (Hmgcl)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
101968282 (Hmgcl)
Enzymes [BR:
iti01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
101968282 (Hmgcl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-GeneID:
101968282
NCBI-ProteinID:
XP_005317654
UniProt:
I3MI86
LinkDB
All DBs
Position
Unknown
AA seq
325 aa
AA seq
DB search
MATLRKALPRRLARLASLRAVSTSSMGTFPKRVKIVEVGPRDGLQNEKNIVPTPVKIKLI
DMLSEAGLPVVEVTSFVSPKWVPQMADHTEVLKGIQKFPGINYPVLTPNLKGFEAAVAAG
AKEVSVFGAASELFTRKNINCSIDESFQRMDVILKAAQATNIPVRGYVSCVLGCPYEGKI
PPAKVAEVAKKLYSMGCYEISLGDTIGVGTPGIMKDMLSAVMHEVPVAALAVHCHDTYGQ
ALANTLMALQMGVSVVDSSVAGLGGCPYAQGASGNLATEDLVYMLTGLGIHTGVNLQKLL
EAGDFICQVLNRKTSSKVAQASCKL
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggcgacactgaggaaggcgctaccgcggcgactggcgcgcttggcgtccctccgggct
gtcagtacctcatctatgggcactttcccaaagcgggtgaaaattgtggaagttggtccc
cgagatggactgcaaaatgaaaagaatatcgttcctactccagtgaaaatcaagctgata
gacatgctctcggaagcaggactccctgtcgtagaagtcaccagttttgtgtctcccaag
tgggttccccagatggctgaccacactgaagtcttgaagggcattcagaagtttcctggc
atcaactacccagtcctgaccccaaatttgaaaggcttcgaggcagcggtggctgcaggc
gccaaggaagtgagcgtctttggggccgcctcagagctcttcaccaggaagaacatcaac
tgctccatagacgagagcttccagcgcatggacgtgatcttgaaggcagctcaggccacc
aatattccagtgcgggggtacgtctcctgtgtgcttggatgcccctacgaagggaagatc
cccccggctaaagtagctgaggttgccaagaagttgtactcaatgggctgctatgagatc
tccctgggggacacaatcggcgtgggcaccccagggatcatgaaagacatgctgtctgct
gtcatgcacgaggtacctgtggctgccctggctgtccactgccatgacacctatggccag
gccctggccaacaccttgatggccctgcagatgggtgtgagtgtcgtggactcttccgtg
gcaggacttggaggctgtccctatgcacagggggcatcagggaacttggccactgaggac
ctggtctacatgctaactggcttgggcattcacacgggtgtgaaccttcagaagctcctg
gaagctggagactttatctgtcaagtcctgaacagaaaaaccagttccaaagtggcacag
gctagctgtaaactctga
DBGET
integrated database retrieval system
