Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101968297
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Entry
101968297 CDS
T10664
Symbol
Samd9
Name
(RefSeq) sterile alpha motif domain-containing protein 9
KO
K23949
sterile alpha motif domain-contaning protein 9
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
iti04131
]
101968297 (Samd9)
Membrane trafficking [BR:
iti04131
]
Endosome - Lysosome transport
Others
Others
101968297 (Samd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
Ish1
NPHP3_N
SAM_PNT
DNA_meth_N
Motif
Other DBs
NCBI-GeneID:
101968297
NCBI-ProteinID:
XP_005340593
LinkDB
All DBs
Position
Unknown
AA seq
1579 aa
AA seq
DB search
MAEQLNLPENTDDWTKEDVNRWLESHKVDQKHRDTLVAQDVNGAILKWLNKTNLVDMGIT
HGPAIQIEELFKELLKTSSRDPTQTSKGKKGSKNKKQTVKQKESKETSEQKQKNNNDSDV
SKATTSPGSKSLKDELMEDETDDLKEKQPCLEPTCIPYPFDESSDPYRYKLHFILQPETG
SRNLIDPAREFKALTNTKTATEEDIKMKFSNEVFRFASACMNSRTNGTIHLGVEDKPHGK
IVGVQITKVTKEALIEHFHKMIHQYFEAHQVQQAEKCIREPRFVEVLLPNSTVSDRFVIE
VDVIPQYSECGEDYFQIKMQNCNNKAWEQSSKYSVFVRDGPKSKDITKSKSDFKAFKLDL
KKVAESRKEAEEKCKEKPNKNKSEGSKLVKLLTGNQDLLDNSFYDWYILVTNKCNPEQTK
HLDFLKEIKWFAVLEFDPESARNGVVKAFKESRVANLHTPSLFADGTTCSDKISSLNLYQ
QPSWIFCNGRSDLDSEKYKPLDPISWQRERASDVRKLISFLTREDIMPRGKFLVVFLLLS
SVDDPRDPLIETFCAFYQDLKGMESILCICVHSHICQGWKDLLEARLTKHQDELSNQCIS
ALNLEEINGTVLKLKSVTRSSKRLLPSVGSSTVLLKKEEEIMTALEILCENECEGTLLEK
DQKKLLEFKASKEEDFYRGGKVSWWNFYFSSESYFSSFVKRDKYERLEEMIQNWADSSKQ
TCAKILHLYHHPGCGGTTLAMHLLWDLRKKFRCAVLKNKTVDFSEIGEQVTNLITYGAAG
HQEYLPVLLLVDDFEEQDNVYLLQASIHTAVANKHIRYERPLVIILNCMRSQNPEKSARN
SDSIALIQQLSPKEQRAFELKLKEIKEQHKNFEDFYSFMIMKNNFNKEYIENVVRNILKG
QNICTKEAKLFSFLALLNSYVPDTTISLSQCEKFLGISNKKAYWGTEKLEDKMGTFSTIL
IRTEVEECGKYCGVRIIHPLIAILSLEELKKSYNLDKSQIMLDLLTENMFYDAAIGKSKF
LQDMQTLLLTRQRNEPEGTGNWFSPFIEALHKDEGNEAVKAVLLEGISRFNPNAFMCQAL
SRHFYLKEKDFSNALTWAKQAKKIEPDNSYISDTLGQVYKSKIRWWIEDNGRNRNISVDD
LTNLLELAVNASSAFRESQQQSEDREYEAKERLYQKSKRRYDTYNIAGYQGEIEVGLYTI
QILQLIPFFDNKNELSKRYMVNFISGNSDIPGDTNEFKVVLKNFIPYLTTLQSSLKRSFD
FFDDYFVLLKPRNNIKQNEEAKTRRKVASSFKKYVDIFGPLAESHSRDVGSKLHLPLQVE
RTRRTLEALKADKFSGLLEYLIKSQEDALSTMEDIVNKYTFLSEQCTVKMHLKEKQNFIL
ANIILFCVKPASKLVKSIKKLKEQLREVLQQVGTTYQYSEPYFLASLLFWPENQQLDQDS
KLMEKYAQSLQNSFRGQYKHMYRTKQPIAYFFLGKGNNMNRLVHKGKIDQCFGKTPDINF
VWQSGDVWKEKKVQDLLLRLQGRAENNCLYIEYGINEKITIPISPAFLGQLRSGRSIEKV
SFYLGFSIGGPLAYDIEIV
NT seq
4740 nt
NT seq
+upstream
nt +downstream
nt
atggcagagcaactaaaccttccagaaaatacagatgactggacaaaagaagatgtaaac
cgatggttagaaagccataaggttgaccaaaagcacagggacaccttggtggcccaggat
gtgaatggtgccatcctgaagtggttaaacaaaacgaatcttgtggatatgggcataacc
cacggaccagctatccaaatagaagagctcttcaaggaattactgaaaacatcctctcga
gatcctactcagacatccaaggggaaaaaaggcagtaaaaataaaaagcaaaccgtgaag
caaaaggaaagtaaagagacttcggaacaaaaacaaaagaataacaacgattcagatgtg
tccaaagccactacaagtccaggctctaagtcactgaaagatgagctcatggaagatgaa
acagatgacttaaaggagaagcagccatgcctagaaccaacatgtatcccatatcctttt
gatgaatccagtgatccatatcgttataaattacatttcattctacagcctgaaactgga
tcacgcaatctcatcgatccagcacgtgagttcaaagccttaacaaatacaaaaacagcc
acagaagaggatattaagatgaaatttagcaacgaggttttccgatttgcctcagcttgt
atgaattcacgtaccaatggcaccattcatttgggagtcgaagacaaaccccatggaaaa
attgttggtgtgcaaatcaccaaagtcactaaagaagccctaattgaacacttccataag
atgatacatcagtattttgaagcacatcaggtccaacaagcagagaagtgcattcgagag
cccagatttgtggaagttttactgccaaacagtactgtatctgacagatttgttattgaa
gtggatgtcattccacaatattcggaatgtggagaggactatttccagatcaaaatgcaa
aactgtaacaacaaagcatgggaacaaagttcaaaatactctgtctttgtgagagatggg
cccaaatctaaggacatcacaaaaagtaagtcggacttcaaagcttttaaattagactta
aaaaaagtggcagagtctaggaaagaagcagaagaaaaatgcaaagaaaagccaaataaa
aacaaaagtgagggatccaagctagttaaactgttgacgggaaatcaagatctgttggat
aattcattctatgactggtacattcttgtaacaaataaatgtaacccagagcaaacaaaa
cacttggatttcctcaaggaaatcaagtggtttgctgtgttagagtttgatcccgaatca
gcaaggaatggagtagtcaaagctttcaaagaaagccgagtagcaaacctccacactcca
agtctgtttgcagatgggaccacgtgcagtgacaagatttctagtctgaatctttaccag
caacccagctggattttctgcaatgggaggtcagaccttgacagtgaaaaatacaaaccc
ttagatccaatttcgtggcaaagggaaagagcttctgacgtcaggaaactgatttcattc
ctcacacgtgaagacataatgccaagagggaagtttttggtggtgtttctattactctcc
tctgtggatgaccccagagaccccctcatcgagactttctgtgctttctaccaagatctc
aaaggaatggaaagtatactgtgtatttgtgtacattcacacatatgccagggatggaaa
gatctgcttgaagcaagattaacgaaacaccaagatgaattatcaaaccaatgtatttct
gccttaaatcttgaagaaataaatggcactgttctgaaactaaaatctgtaactcgatcc
tcaaagagattattgccctcagttggttcatctactgtccttctgaagaaagaagaagaa
atcatgactgccctggaaattctctgtgaaaatgaatgtgaaggcacactcttggagaaa
gaccagaaaaaattactagaattcaaggcgtccaaagaggaagacttctaccgaggtggc
aaagtatcatggtggaacttctacttttcttctgaaagctatttttcatcttttgttaaa
agagataagtatgaaagactagaagaaatgattcaaaactgggcagattcttctaaacaa
acatgtgccaaaatccttcatctgtatcatcatccaggctgtggggggactaccttggct
atgcatcttctgtgggatctaaggaagaaattcagatgtgctgtgctgaaaaataagaca
gtggatttttctgaaattggagaacaggtgaccaatttaattacctatggggcagcaggc
catcaggaatacttaccagtattgctccttgttgatgattttgaagaacaagataatgtc
taccttctgcaagcttccattcacacagctgtagctaataagcacattcgatatgagaga
cctctagtgatcatcctaaattgcatgagatcacaaaatcctgaaaaaagtgcaaggaac
tcagacagtattgccctaatacaacaactgtctcccaaagaacagagagcttttgagctt
aagttgaaagaaatcaaagaacagcataaaaactttgaagatttttattccttcatgatc
atgaaaaacaattttaataaagagtacatagaaaatgtggtgaggaatattctgaaaggg
cagaatatttgtaccaaggaagcaaagctcttttcttttctggctcttctgaattcatat
gtgcctgataccaccatttcactctcacaatgtgagaagttcttaggaatctcaaacaag
aaggcttactggggaacagaaaaacttgaagacaaaatgggcaccttctctacaattctg
ataagaacagaggtggaagaatgtgggaaatactgtggagtgcgcatcattcatcctttg
attgccattctctcactggaagaattgaagaaaagctataacttggataaaagtcaaatt
atgctggatttgctcacagaaaatatgttctatgatgctgccataggaaaaagcaaattt
ctccaagatatgcaaaccctactgctcacaagacagcgaaatgaacctgaaggtacagga
aactggttttccccattcattgaagcattacataaagatgaaggcaatgaggcagttaaa
gctgtattgcttgaaggtatcagtcgattcaacccaaatgcattcatgtgccaagccttg
tcaagacatttctaccttaaagagaaggatttcagcaatgctctgacgtgggcaaaacaa
gccaaaaagatagaacctgacaattcctatatctcagacacactgggtcaagtctacaaa
agtaaaataagatggtggatagaagataatggaagaaataggaatatttcagttgatgac
ctaactaatcttctggaattagctgtaaatgcctccagtgcattcagagaatctcaacag
caaagtgaagatcgagaatacgaagcgaaggaaagactgtatcagaagtcaaaaaggagg
tatgacacttacaacattgctggctatcaaggagagatagaagttggactttacacaatc
cagattctccagctcattccattttttgacaataaaaatgaactgtctaaaagatatatg
gtcaattttatatcaggaaatagtgatattccaggtgatacaaatgaatttaaagtggtc
ctcaagaactttattccttatctaactacattgcaatcttctttgaagaggtcctttgat
ttttttgatgattactttgtccttctaaaacccaggaacaacattaagcaaaatgaagag
gccaaaactcggaggaaagtagcttcatctttcaagaagtatgtagatatatttggtccc
ttagcagaatcacatagtagagatgttggatcaaaactccatttgccacttcaagtagag
agaactcgaagaaccctagaagccttaaaagcagacaagttttctgggctcctagaatat
cttatcaaaagtcaagaagatgctctaagcaccatggaagatatagtgaacaaatatact
tttctctctgaacaatgtactgtcaaaatgcacctaaaggaaaagcaaaactttatcttg
gccaacatcattctcttttgtgttaaacctgcctccaaactagtgaagtcaattaaaaaa
ctgaaagaacagcttcgagaggtcttgcaacaagtaggaacaacttaccaatattcagaa
ccttatttcctagcttcactcttattctggccagaaaaccaacaactggatcaggattct
aaactaatggaaaagtatgctcaatcactgcaaaattctttcagggggcaatataagcac
atgtatcgtacaaagcaacctatcgcatatttctttcttggaaaaggaaacaatatgaac
agacttgtccacaaaggaaaaatcgatcaatgctttggaaagacacctgatattaatttt
gtgtggcaaagtggagatgtatggaaggagaaaaaagtccaagaccttttgcttcgtttg
caaggacgagctgaaaataattgtttatacatagagtatgggatcaatgaaaaaatcaca
atacccatctcacctgctttcttgggtcaacttagaagtggtaggagcatagaaaaagtg
tctttttacctgggattttccattggaggcccacttgcctatgacattgaaattgtttaa
DBGET
integrated database retrieval system
