Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101968355
Help
Entry
101968355 CDS
T10664
Symbol
Taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101968355 (Taf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
iti03021
]
101968355 (Taf5)
03036 Chromosome and associated proteins [BR:
iti03036
]
101968355 (Taf5)
Transcription machinery [BR:
iti03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
101968355 (Taf5)
Coactivators
SAGA/TFTC/STAGA complex
101968355 (Taf5)
Chromosome and associated proteins [BR:
iti03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
101968355 (Taf5)
STAGA complex
101968355 (Taf5)
TFTC complex
101968355 (Taf5)
SAGA complex
101968355 (Taf5)
SLIK complex
101968355 (Taf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
WD_LRWD1
Beta-prop_DCAF12
Beta-prop_Nup120_160
RAB3GAP2_N
CDK5RAP3
Beta-prop_RIG_1st
eIF2A
Cytochrom_D1
ABM-like
PROPPIN
Motif
Other DBs
NCBI-GeneID:
101968355
NCBI-ProteinID:
XP_005333662
UniProt:
I3MN47
LinkDB
All DBs
Position
Unknown
AA seq
787 aa
AA seq
DB search
MAALAEEQTEVAVKLEPEGPPTLLPPQAGDGAGEGSGGTLNNGPNGGSGNVAASSSAGGD
GGTPKAPVPAAASEAGAPHDRQTLLAVLQFLRQSNLREAEEALRREARLLEEAVAGSGTP
GEVDGAGTEAASALLSRVTASAPGSTASDPPSTGASGATVVSGSASGSVAPGKVGNVAVE
DQPDVSAVLSAYNQQGDPTMYEEYYSGLKHFIECSLDCHRAELSQLFYPLFVHMYLELVY
NQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLRISRDS
YQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAGEAKREANKSKVF
FGLLKEPEIEVPLDDEDEEGENEEGKPKKKKPKKDSIGSKSKKQDPNAPPQNRIPLPELK
DSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVTDDSSLIAGGFADST
VRVWSVTPKKLRSVKQASDLNLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSP
DRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWA
TDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIH
SLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDN
TVRLWDAIKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTPVVHLHFTRRNLVLA
AGAYSPQ
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctggcggaggagcagacggaggtggcggtcaagctagagcctgagggaccg
ccaacgctgctacctccacaggcgggcgacggcgcaggcgagggtagcggcggcactctc
aacaacggccccaacggcggcagtgggaacgttgcggcatcgtcatcggctggcggggat
ggcgggacccccaaggccccggtgcccgccgctgcttcagaggccggcgctccccacgac
cgacagactctgctggcggtgttgcaattcctacggcagagtaacctccgcgaggccgag
gaggcgctgcgccgtgaggcccggctgctggaagaggcagtggcgggctccggaaccccg
ggagaggtggacggtgccggcactgaggcggcgagcgcgcttctcagccgggtcacggcc
tctgcccccggctctacggcctccgatcctcccagcactggtgcttcaggggccacagtc
gtctcaggatcagcttcaggttctgtggctccggggaaagttggaaatgtagctgtggaa
gaccagccagatgtcagtgctgtcttgtcggcctacaaccaacaaggagaccccacaatg
tatgaagaatactatagtggactgaaacacttcatcgaatgttctctggactgccatcgg
gcagaattatcccaactcttttatcctctgtttgtacacatgtacttggagctagtctat
aatcaacatgagaatgaagcaaaatcattctttgagaagttccatggagatcaggaatgt
tattaccaggatgatctacgagtattatctagtcttaccaaaaaggaacacatgaaaggg
aatgaaaccatgttggattttcgaacaagtaaatttgttctgcgtatttcccgtgactcg
taccaactcttgaagaggcatcttcaggagaaacagaacaatcagatatggaacatagtt
caggagcacctctacattgacatctttgatgggatgccgcgtagtaagcaacagatagat
gcgatggtgggaagtttggcaggagaggctaaacgagaggcaaacaaatcaaaggtattt
tttggtttgttaaaagaaccagaaattgaggtacctttggatgatgaggatgaggaagga
gaaaatgaagaaggaaaacctaaaaagaagaagcctaaaaaagatagtattggatccaaa
agcaaaaaacaagatcccaatgctccacctcaaaacagaatccctcttcccgaattgaaa
gattcagataagttggataagataatgaatatgaaagaaaccaccaaacgagtgcgcctt
gggccagactgcttaccctccatttgtttctatactttcctcaatgcttaccagggcctc
actgcagtggatgtcactgatgattctagtctgattgctggaggttttgcagattcaaca
gttagagtctggtctgtgacacccaaaaagctccgtagtgtcaaacaagcatcagatctt
aacctcatagacaaagaatcagatgatgtcttagaaagaatcatggatgagaaaactgca
agtgagttgaagattttatatggtcacagtgggcctgtctatggagccagcttcagtcca
gataggaactacctgctttcctcttcagaggatggaactgttagattgtggagccttcaa
acgtttacttgcttggtgggatataaaggacacaactatccagtatgggacacacagttt
tctccatatggatattattttgtatcagggggccacgaccgagtagctcggctctgggct
acagaccattatcagcctttaaggatatttgctggtcatcttgctgatgtgaattgtacc
agatttcatccaaattcaaattatgttgctacgggctcagcagacagaactgtgcggctc
tgggatgtcctgaatggtaattgtgtaaggatcttcactggacacaagggaccaattcat
tccttgacattttctcccaatgggagattcctggctacaggagcaactgatggcagagta
ctcctttgggatattggacatggtttgatggttggagaattaaaaggccacactgacaca
gtctgttcacttaggtttagtagagatggtgaaattttggcatcaggttcaatggataat
acagttcggttatgggatgccatcaaagcatttgaagatttagagactgatgactttact
acagccactgggcatataaatttacctgagaattcacaggagttattattgggtacatat
atgaccaaatcaacaccagttgtacacctccattttactcgaagaaatttggttctagct
gcaggagcttatagtccgcaataa
DBGET
integrated database retrieval system
