Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101968381
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Entry
101968381 CDS
T10664
Symbol
Rfc3
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti03030
DNA replication
iti03410
Base excision repair
iti03420
Nucleotide excision repair
iti03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101968381 (Rfc3)
03410 Base excision repair
101968381 (Rfc3)
03420 Nucleotide excision repair
101968381 (Rfc3)
03430 Mismatch repair
101968381 (Rfc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
iti03032
]
101968381 (Rfc3)
03036 Chromosome and associated proteins [BR:
iti03036
]
101968381 (Rfc3)
03400 DNA repair and recombination proteins [BR:
iti03400
]
101968381 (Rfc3)
DNA replication proteins [BR:
iti03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
101968381 (Rfc3)
DNA Replication Termination Factors
ELG1-RFC complex
101968381 (Rfc3)
Chromosome and associated proteins [BR:
iti03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
101968381 (Rfc3)
DNA repair and recombination proteins [BR:
iti03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
101968381 (Rfc3)
Check point factors
HRAD17(Rad24)-RFC complex
101968381 (Rfc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA
Rad17
AAA_22
ABC_tran
AAA_2
zf-HC2
ATPgrasp_ST
AAA_16
T4SS-DNA_transf
Motif
Other DBs
NCBI-GeneID:
101968381
NCBI-ProteinID:
XP_040137847
LinkDB
All DBs
Position
Unknown
AA seq
449 aa
AA seq
DB search
MVKSNEEWLQNLIILKTNSLDNYEEELAFIMQELPKPAALWGFLLLESLLFQQVHQNGPM
HFLPTQLLMRTYMYISQLPSANDCLFGRKTITTLVLRKKYLSTTENSFYLTTFNILEEKK
IQVQCGDFPHLLVYGPSGAGKKTRIMCILRELYGVGVEKLRIEHQTITTPSKKKIEISTI
ASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQLETNSQRDFKVVLLTEVDKLTRDAQHA
LRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAIRVPAPSIEDICHVLTTVCKKEGLNL
PSQLAQRLAEKSCRNLRKALLMCEACRVQQYPFTADQEIPETDWEVYLRETANAIVSQQT
PQRLLEVRGRLYELLTHCIPPEIIMKGLLSELLHNCDGQLKAEVAQMAAYYEHRLQLGSK
AIYHLEAFVAKFMALYKKFMEDGLEGMMF
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaatcaaatgaagagtggcttcagaacctgatcatattgaaaacaaattccctg
gacaactatgaagaggagttggcattcattatgcaggaactgccaaagcctgcagctctg
tggggcttccttctccttgaatcccttttgtttcagcaggtccaccaaaatggcccaatg
catttcctcccaacccaacttttgatgagaacttacatgtacatatctcagttgccctct
gccaacgactgtttatttgggagaaaaacaataacaactttagtactccggaaaaagtat
ctgagcaccacggaaaactctttctatttaacaacatttaatattcttgaagaaaaaaaa
atacaggttcagtgtggtgattttcctcacctgttagtgtatggaccatcaggtgctgga
aaaaagacaagaattatgtgtattctacgtgaactttatggtgttggagtggaaaaattg
agaattgaacatcaaactatcacaactccatctaaaaagaaaattgaaatcagcaccatt
gcaagtaattatcaccttgaagttaatcccagtgatgctggaaatagtgaccgggtagta
attcaggagatgttgaaaacagtggcacagtcacagcaacttgaaacaaactctcaaaga
gattttaaagtggtattattgacagaagttgacaaactcaccagagatgctcaacatgct
ttgcgcagaaccatggaaaagtacatgtccacctgcagattgatcttgtgctgcaattca
acatccaaagtgataccacctattcgtagtagatgcctggcaattcgtgtgcctgctccc
agcattgaagatatttgccatgtgttaactactgtgtgcaagaaggaaggtctgaatctt
ccttcacaactggctcagagacttgcagagaagtcctgtagaaatctcagaaaagcccta
cttatgtgtgaagcctgcagagtacaacaatatccttttactgcagatcaagaaatccct
gagacagattgggaggtgtacctgagggagacagcaaatgctattgtcagtcagcagacg
cctcaaaggcttctcgaagttcgtggaaggctttatgagcttttaactcattgtattcct
cctgagataataatgaagggccttctctcagaacttttgcataattgcgatggacaactg
aaagcagaagtggcccagatggcagcttattatgaacatcgtctacaactgggtagcaaa
gccatttatcacttggaagcatttgtggccaaatttatggcactttataagaagttcatg
gaggatggattggaaggcatgatgttctga
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