Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101968550
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Entry
101968550 CDS
T10664
Symbol
Trim2
Name
(RefSeq) tripartite motif-containing protein 2 isoform X1
KO
K11997
tripartite motif-containing protein 2/3
Organism
iti Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Brite
KEGG Orthology (KO) [BR:
iti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
iti04121
]
101968550 (Trim2)
Ubiquitin system [BR:
iti04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
101968550 (Trim2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NHL
DUF4934
Filamin
DUF5128
zf-B_box
SGL
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
TEN_NHL
RING_XB3-XBAT31
zf-C3HC4_4
zf-ANAPC11
Prok-RING_4
PAF-AH_p_II
Mala_s_1-like
zf-RING_11
ChuX_HutX
Caskin-tail
Motif
Other DBs
NCBI-GeneID:
101968550
NCBI-ProteinID:
XP_021585928
LinkDB
All DBs
Position
Unknown
AA seq
792 aa
AA seq
DB search
MSRRPGTEPRMEMTSPGAIWNRGPRAQQQRAGSKTAGLPCQWSRMASEATNIPSPVVRQI
DKQFLICSICLERYKNPKVLPCLHTFCERCLQNYIPAHSLTLSCPVCRQTSILPEKGVAA
LQNNFFITNLMDVLQRTPGSNIEESSILETVTAVAAGKPLSCPNHDGNVMEFYCQSCETA
MCRECTEGEHAEHPTVPLKDVVEQHKASLQVQLDAVNKRLPEIDSALQFISEIIHQLTNQ
KASIVDDIHSTFDELQKTLNVRKSVLLMELEVNYGLKHKVLQSQLDTLLQGQESIKSCSN
FTAQALNHGTETEVLLVKKQMSEKLNELADQDFPLHPRENDQLDFIVETEGLKKSIHNLG
TILTTNAVASETVATGEGLRQTIIGQPMSVTITTKDKDGELCKTGNAYLTAELSTPDGSV
ADGEILDNKNGTYEFLYTVQKEGDFTLSLRLYDQHIRGSPFKLKVIRSADVSPTTEGVKR
RVKSPGSGHVKQKAVKRPASMYSTGKRKENPIEDDLIFRVGTKGRNKGEFTNLQGVAAST
TGKILIADSNNQCVQIFSNDGQFKSRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKW
VSIFSSDGKFKTKIGSGKLMGPKGVSVDRNGHIIVVDNKACCVFIFQPNGKIVTRFGSRG
NGDRQFAGTLDGPHFAAVNSNNEIIVTDFHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAP
TGVAVDSNGNIIVADWGNSRIQVFDGSGSFLSYINTSADPLYGPQGLALTSDGHVVVADS
GNHCFKVYRYLQ
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgccgccctgggactgagcccagaatggagatgaccagcccgggagccatctgg
aaccggggaccccgagcgcagcagcagcgtgcagggtcaaagacagccggcctcccatgt
cagtggtctaggatggccagtgaagccaccaacatcccaagtcctgtggtgcgccagatt
gacaagcagtttctgatttgcagtatatgcctggaacggtacaagaaccccaaggttctc
ccctgtctgcacacgttctgcgagaggtgcctgcagaactacattcccgcccacagttta
accctctcctgcccagtgtgccgccagacctccatcctgcccgagaaaggggtggccgcg
cttcagaacaacttcttcatcacaaacctgatggacgtgctgcagcggacgccaggcagc
aacatagaggagtcttccatcctggagaccgtcaccgctgtggctgcgggaaagcctctc
tcttgcccgaaccacgatgggaatgtgatggaattttactgccagtcctgtgagaccgcc
atgtgtcgggagtgcactgagggcgagcacgcagagcaccccacggtccccctcaaggac
gtggtggagcagcacaaggcctcactccaggtccagctggacgctgtcaacaaaaggctc
ccagaaatagattctgctcttcagttcatctcagaaatcatccatcagttaaccaaccaa
aaggccagcatcgtggatgacatccattccaccttcgatgagctccagaagacgttaaat
gtgcgcaagagcgtgctgctgatggaactggaggtcaactatggcctcaaacacaaagtg
ctgcagtcgcagctggatactctgctccaggggcaggagagcatcaagagctgcagcaac
ttcaccgcgcaggccctcaaccatggcacggaaacggaggtgctgctggtgaagaagcag
atgagcgagaagctgaacgaactggccgaccaagatttccccctgcacccgcgtgaaaac
gatcagctggacttcatcgtggaaaccgaggggctcaagaagtccatccacaacctcggg
accattctgaccaccaacgcggtggcctccgagacggtggccacgggcgaggggctgcgg
cagaccatcatcgggcagcccatgtccgttaccataacgaccaaggacaaagacggcgag
ctgtgcaaaaccggcaatgcctacctcacggctgagctgagcacccccgacggcagcgtg
gcggacggggagatcctggacaacaaaaacggcacctacgaatttttgtacacggtccag
aaggaaggcgacttcaccctgtctctgagactctacgaccagcacatacgaggcagcccg
tttaagctgaaggtgatccggtccgccgacgtgtcgcccaccaccgaaggcgtgaagcgg
cgcgtcaagtccccagggagcggccacgtgaagcagaaagcagtgaaaagacctgcgagc
atgtacagcaccgggaagcgaaaagagaaccccatcgaggacgatctgatctttcgagtg
ggaaccaaaggaagaaataaaggagagtttacgaatcttcagggggtagctgcatctaca
actggaaagatattaattgcagacagtaacaaccaatgtgtccagatattttccaatgat
ggccagttcaagagtcgttttggcatacgaggacgctctcccgggcagctgcagaggccc
acaggagtagccgtgcaccccagtggggacataatcattgcagattatgataataagtgg
gttagcatcttctcatcagatggaaagtttaagacaaaaattggatcgggaaagctgatg
gggcccaaaggagtctctgtggaccgcaacgggcacattatcgtggtggacaacaaagca
tgctgcgtgtttatcttccaaccaaatgggaaaatagtcaccaggtttggtagccgagga
aacggggacaggcagtttgcaggtacactcgacggtcctcattttgcagctgtaaatagc
aataatgagattattgttacagatttccataatcattctgtcaaggtgtttaatcaggaa
ggagaattcatgttgaagtttggctccaacggagaaggaaatgggcagtttaatgccccc
acaggtgtagcagtggattcgaatggaaacatcattgtggcagactggggaaacagcagg
atccaggtgtttgatgggagtggatcgtttttgtcctacattaacacatctgctgacccg
ctctacggcccccaaggcctagccctaacttcagacggccatgttgtggttgcagactct
ggaaatcactgtttcaaggtctatcgatacctacagtaa
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