KEGG   Ictidomys tridecemlineatus (thirteen-lined ground squirrel): 101968833
Entry
101968833         CDS       T10664                                 
Symbol
Wdr41
Name
(RefSeq) WD repeat-containing protein 41 isoform X2
  KO
K23610  WD repeat-containing protein 41
Organism
iti  Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Pathway
iti04140  Autophagy - animal
iti05014  Amyotrophic lateral sclerosis
iti05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:iti00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    101968833 (Wdr41)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    101968833 (Wdr41)
   05022 Pathways of neurodegeneration - multiple diseases
    101968833 (Wdr41)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:iti04131]
    101968833 (Wdr41)
Membrane trafficking [BR:iti04131]
 Autophagy
  Other autophagy associated proteins
   Rab associated proteins
    101968833 (Wdr41)
SSDB
Motif
Pfam: Beta-prop_WDR41 Beta-prop_IFT122_1st Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR36-Utp21_1st WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_TEP1_C WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_EML WD40_Gbeta WD40_MABP1-WDR62_2nd ASA1 EIF3I Beta-prop_RIG_2nd DSE1_N Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR75_1st Beta-prop_Vps41 PAC11 Beta-prop_IP5PC_F Beta-prop_NOL10_N CFAP251_N Beta-prop_SCAP WD40_RFWD3 PQQ_2
Other DBs
NCBI-GeneID: 101968833
NCBI-ProteinID: XP_013215633
LinkDB
Position
Unknown
AA seq 459 aa
MLRWLIGGGREPQGLAEKSPLQTIGEEQTQNPYTELLVLKAHHDIVRFLVQLDDYRFASA
GDDGIVVIWNAQTGEKLLELSGHTQKITAVITFPSLESCEEKNQLILTASADRTVIVWDS
DTGRQVQRVSCFQSTVKCLTVLKRLDVWLSGGNDLCVWNRKLDLLCKTSHLSDTGISALV
EIPKNYVIAAVGKELIIFRLVEPTEGSFEWDIIEVKRLLDHQDNILSLVNVNDQSFVTGS
HVGELIIWDVLDWTIQAYERNFWDPSPQLDTQQEIKLCQKPNDISIHHFTCDEENVFAAV
GRGLYVYNLQMKRVIACQKTAHDSNVLHIAKLPNRQLISCSEDGSVRIWELREKQQLTAE
PVPTGFFNMWGFGRVNKQASQPIKKQQENATLCSLELIGDLIGHSSSVEMFLYFEDHGLV
TCSADHLIILWKNGERESGLRSLKLFQKLEENGDLYLAV
NT seq 1380 nt   +upstreamnt  +downstreamnt
atgttgcgatggctgatcgggggaggccgcgaacctcagggactggccgagaaatctcca
ttacagacaataggtgaagaacaaactcagaacccctacactgagctgcttgtactgaaa
gctcatcatgatattgtacgatttctggtacagttagatgactacagatttgcatctgct
ggggatgatggaattgtagtcatttggaatgcccagacaggagaaaagcttttggaactc
agtggacacactcaaaagataacagctgttattacatttccttccttggaatcttgtgaa
gaaaaaaatcaactcatcttgacagcctctgctgatcgaacagttattgtatgggattct
gatactggcagacaagttcagagagtatcatgtttccagtctactgtaaagtgtttaact
gttcttaagagactagatgtttggctctctggtgggaatgacttatgtgtgtggaaccga
aaattagatctcctgtgtaagaccagccacctttctgatacaggtatcagtgctttggtt
gaaatacccaagaactatgtcatagcagcagttggcaaagaactgataattttcagatta
gtagaacccacagaaggatcctttgaatgggatattattgaagttaagcgcctccttgac
caccaggataatattctttcattggttaatgtcaatgatcagagttttgttacgggctcc
catgttggagagctgatcatctgggatgtcctggactggaccattcaggcttatgaacgc
aacttctgggacccatctccacagctggacacccagcaagaaataaaactctgtcaaaaa
ccaaatgacatttccattcatcatttcacatgtgatgaagagaatgtatttgctgcagtt
ggaaggggtttatatgtgtataaccttcaaatgaagcgtgtgattgcctgccagaaaact
gcacatgactccaatgtcttgcatattgccaaacttccaaacaggcagttaatctcatgc
tcagaagatggcagtgtacgcatttgggagttacgagaaaaacagcagctcacagctgaa
cctgtaccaacaggtttttttaacatgtggggatttggaagagtgaacaaacaagccagc
caacctattaaaaagcagcaagaaaatgccactttgtgttcactggagctcattggtgat
ttgattggacactcatcctctgtggagatgtttctgtactttgaagatcatggacttgtt
acttgctctgctgatcatctcattattttgtggaaaaatggagaacgagaatctggattg
cgcagtttaaaattatttcagaaattagaggaaaatggtgatttataccttgctgtttag

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